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Identification
HMDB Protein ID HMDBP11559
Secondary Accession Numbers
  • 21003
Name Ubiquitin carboxyl-terminal hydrolase 38
Synonyms
  1. Deubiquitinating enzyme 38
  2. HP43.8KD
  3. Ubiquitin thiolesterase 38
  4. Ubiquitin-specific-processing protease 38
Gene Name USP38
Protein Type Enzyme
Biological Properties
General Function Involved in ubiquitin thiolesterase activity
Specific Function Thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the C- terminal Gly of ubiquitin (a 76-residue protein attached to proteins as an intracellular targeting signal)
Pathways Not Available
Reactions Not Available
GO Classification
Function
hydrolase activity, acting on ester bonds
catalytic activity
hydrolase activity
ubiquitin thiolesterase activity
thiolester hydrolase activity
Process
metabolic process
catabolic process
macromolecule catabolic process
cellular macromolecule catabolic process
modification-dependent macromolecule catabolic process
modification-dependent protein catabolic process
ubiquitin-dependent protein catabolic process
Cellular Location
  1. Cytoplasmic
Gene Properties
Chromosome Location Not Available
Locus Not Available
SNPs USP38
Gene Sequence
>3129 bp
ATGGACAAGATCCTGGAGGGCCTTGTGAGTTCCTCGCATCCCCTGCCCCTCAAGCGGGTG
ATTGTGCGGAAGGTGGTGGAATCGGCGGAGCACTGGCTAGACGAGGCGCAGTGCGAGGCC
ATGTTTGACCTGACGACCCGGCTCATCCTGGAGGGCCAGGACCCTTTCCAGCGGCAGGTG
GGGCACCAGGTGCTGGAGGCCTACGCACGATACCACCGGCCAGAGTTCGAGTCCTTCTTC
AACAAGACCTTCGTGTTGGGCCTCCTTCATCAGGGCTACCACTCTCTGGACAGGAAGGAT
GTAGCCATCCTGGACTACATTCACAACGGCCTGAAGCTGATTATGAGCTGTCCGTCGGTG
CTGGATCTCTTTAGCCTCCTGCAGGTAGAGGTGTTACGGATGGTGTGTGAGAGGCCGGAG
CCGCAGCTCTGTGCCCGACTGAGCGACCTTCTGACCGACTTTGTGCAATGCATCCCCAAG
GGGAAATTGTCCATCACGTTCTGTCAACAGCTGGTTCGAACGATAGGCCATTTCCAGTGC
GTGTCCACCCAGGAAAGAGAGCTGCGGGAATATGTCTCCCAGGTGACAAAAGTGAGTAAC
TTGCTGCAGAACATCTGGAAGGCCGAGCCTGCCACACTACTGCCTTCCCTGCAAGAAGTT
TTTGCAAGCATCTCTTCCACAGATGCATCATTTGAACCTTCTGTAGCATTGGCAAGCCTT
GTGCAGCATATTCCTCTTCAGATGATTACAGTTCTCATCAGGAGCCTTACTACGGATCCA
AATGTAAAAGATGCAAGTATGACCCAAGCCCTTTGCAGAATGATTGACTGGCTATCCTGG
CCATTGGCTCAGCATGTGGATACATGGGTAATTGCACTCCTGAAAGGACTGGCAGCTGTC
CAGAAGTTTACTATTTTGATAGATGTTACTTTGCTGAAAATAGAACTGGTTTTTAATCGA
CTTTGGTTTCCTCTTGTGAGACCTGGTGCTCTTGCAGTTCTTTCTCACATGCTGCTTAGC
TTTCAGCATTCTCCAGAGGCGTTCCATTTGATTGTTCCTCATGTGGTTAATTTGGTTCAT
TCTTTCAAAAATGATGGTCTGCCTTCAAGTACAGCCTTCTTAGTACAATTAACAGAATTG
ATACACTGTATGATGTATCATTATTCTGGATTTCCAGATCTCTATGAACCTATTCTGGAG
GCAATAAAGGATTTTCCTAAGCCCAGTGAAGAGAAGATTAAGTTAATTCTCAATCAAAGT
GCCTGGACTTCTCAATCCAATTCTTTGGCGTCTTGCTTGTCTAGACTTTCTGGAAAATCT
GAAACTGGGAAAACTGGTCTTATTAACCTAGGAAATACATGTTATATGAACAGTGTTATA
CAAGCCTTGTTTATGGCCACAGATTTCAGGAGACAAGTATTATCTTTAAATCTAAATGGG
TGCAATTCATTAATGAAAAAATTACAGCATCTTTTTGCCTTTCTGGCCCATACACAGAGG
GAAGCATACGCACCTCGGATATTCTTTGAGGCTTCCAGACCTCCATGGTTTACTCCCAGA
TCACAGCAAGACTGTTCTGAATACCTCAGATTTCTCCTTGACAGGCTCCATGAAGAAGAA
AAGATCTTGAAAGTTCAGGCCTCACACAAGCCTTCTGAAATTCTGGAATGCAGTGAAACT
TCTTTACAGGAAGTAGCTAGTAAAGCAGCAGTACTAACAGAGACCCCTCGTACAAGTGAC
GGTGAGAAGACTTTAATAGAAAAAATGTTTGGAGGAAAACTACGAACTCACATACGTTGT
TTGAACTGCAGGAGTACCTCACAAAAAGTGGAAGCCTTTACAGATCTTTCGCTTGCCTTT
TGTCCTTCCTCTTCTTTGGAAAACATGTCTGTCCAAGATCCAGCATCATCACCCAGTATA
CAAGATGGTGGTCTAATGCAAGCCTCTGTACCCGGTCCTTCAGAAGAACCAGTAGTTTAT
AATCCAACAACAGCTGCCTTCATCTGTGACTCACTTGTGAATGAAAAAACCATAGGCAGT
CCTCCTAATGAGTTTTACTGTTCTGAAAACACTTCTGTCCCTAACGAATCTAACAAGATT
CTTGTTAATAAAGATGTACCTCAGAAACCAGGAGGTGAAACCACACCTTCAGTAACTGAC
TTACTAAATTATTTTTTGGCTCCAGAGATTCTTACTGGTGATAACCAATATTATTGTGAA
AACTGTGCCTCTCTGCAAAATGCTGAGAAAACTATGCAAATCACGGAGGAACCTGAATAC
CTTATTCTTACTCTCCTGAGATTTTCATATGATCAGAAGTATCATGTGAGAAGGAAAATT
TTAGACAATGTATCACTGCCACTGGTTTTGGAGTTGCCAGTTAAAAGAATTACTTCTTTC
TCTTCATTGTCAGAAAGTTGGTCTGTAGATGTTGACTTCACTGATCTTAGTGAGAACCTT
GCTAAAAAATTAAAGCCTTCAGGGACTGATGAAGCTTCCTGCACAAAATTGGTGCCCTAT
CTATTAAGTTCCGTTGTGGTTCACTCTGGTATATCCTCTGAAAGTGGGCATTACTATTCT
TATGCCAGGAATATCACAAGTACAGACTCTTCATATCAGATGTACCACCAGTCTGAGGCT
CTGGCATTAGCATCCTCCCAGAGTCATTTACTAGGGAGAGATAGTCCCAGTGCAGTTTTT
GAACAGGATTTGGAAAATAAGGAAATGTCAAAAGAATGGTTTTTATTTAATGACAGTAGA
GTGACATTTACTTCATTTCAGTCAGTCCAGAAAATTACGAGCAGGTTTCCAAAGGACACA
GCTTATGTGCTTTTGTATAAAAAACAGCATAGTACTAATGGTTTAAGTGGTAATAACCCA
ACCAGTGGACTCTGGATAAATGGAGACCCACCTCTACAGAAAGAACTTATGGATGCTATA
ACAAAAGACAATAAACTATATTTACAGGAACAAGAGTTGAATGCTCGAGCCCGGGCCCTC
CAAGCTGCATCTGCTTCATGTTCATTTCGGCCCAATGGATTTGATGACAACGACCCACCA
GGAAGCTGTGGACCAACTGGTGGAGGGGGTGGAGGAGGATTTAATACAGTTGGCAGACTC
GTATTTTGA
Protein Properties
Number of Residues 1042
Molecular Weight 116545.0
Theoretical pI 6.16
Pfam Domain Function
Signals
  • None
Transmembrane Regions
  • None
Protein Sequence
>Ubiquitin carboxyl-terminal hydrolase 38
MDKILEGLVSSSHPLPLKRVIVRKVVESAEHWLDEAQCEAMFDLTTRLILEGQDPFQRQV
GHQVLEAYARYHRPEFESFFNKTFVLGLLHQGYHSLDRKDVAILDYIHNGLKLIMSCPSV
LDLFSLLQVEVLRMVCERPEPQLCARLSDLLTDFVQCIPKGKLSITFCQQLVRTIGHFQC
VSTQERELREYVSQVTKVSNLLQNIWKAEPATLLPSLQEVFASISSTDASFEPSVALASL
VQHIPLQMITVLIRSLTTDPNVKDASMTQALCRMIDWLSWPLAQHVDTWVIALLKGLAAV
QKFTILIDVTLLKIELVFNRLWFPLVRPGALAVLSHMLLSFQHSPEAFHLIVPHVVNLVH
SFKNDGLPSSTAFLVQLTELIHCMMYHYSGFPDLYEPILEAIKDFPKPSEEKIKLILNQS
AWTSQSNSLASCLSRLSGKSETGKTGLINLGNTCYMNSVIQALFMATDFRRQVLSLNLNG
CNSLMKKLQHLFAFLAHTQREAYAPRIFFEASRPPWFTPRSQQDCSEYLRFLLDRLHEEE
KILKVQASHKPSEILECSETSLQEVASKAAVLTETPRTSDGEKTLIEKMFGGKLRTHIRC
LNCRSTSQKVEAFTDLSLAFCPSSSLENMSVQDPASSPSIQDGGLMQASVPGPSEEPVVY
NPTTAAFICDSLVNEKTIGSPPNEFYCSENTSVPNESNKILVNKDVPQKPGGETTPSVTD
LLNYFLAPEILTGDNQYYCENCASLQNAEKTMQITEEPEYLILTLLRFSYDQKYHVRRKI
LDNVSLPLVLELPVKRITSFSSLSESWSVDVDFTDLSENLAKKLKPSGTDEASCTKLVPY
LLSSVVVHSGISSESGHYYSYARNITSTDSSYQMYHQSEALALASSQSHLLGRDSPSAVF
EQDLENKEMSKEWFLFNDSRVTFTSFQSVQKITSRFPKDTAYVLLYKKQHSTNGLSGNNP
TSGLWINGDPPLQKELMDAITKDNKLYLQEQELNARARALQAASASCSFRPNGFDDNDPP
GSCGPTGGGGGGGFNTVGRLVF
GenBank ID Protein 27545313
UniProtKB/Swiss-Prot ID Q8NB14
UniProtKB/Swiss-Prot Entry Name UBP38_HUMAN
PDB IDs Not Available
GenBank Gene ID NM_032557.5
GeneCard ID USP38
GenAtlas ID USP38
HGNC ID HGNC:20067
References
General References
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  2. Gerhard DS, Wagner L, Feingold EA, Shenmen CM, Grouse LH, Schuler G, Klein SL, Old S, Rasooly R, Good P, Guyer M, Peck AM, Derge JG, Lipman D, Collins FS, Jang W, Sherry S, Feolo M, Misquitta L, Lee E, Rotmistrovsky K, Greenhut SF, Schaefer CF, Buetow K, Bonner TI, Haussler D, Kent J, Kiekhaus M, Furey T, Brent M, Prange C, Schreiber K, Shapiro N, Bhat NK, Hopkins RF, Hsie F, Driscoll T, Soares MB, Casavant TL, Scheetz TE, Brown-stein MJ, Usdin TB, Toshiyuki S, Carninci P, Piao Y, Dudekula DB, Ko MS, Kawakami K, Suzuki Y, Sugano S, Gruber CE, Smith MR, Simmons B, Moore T, Waterman R, Johnson SL, Ruan Y, Wei CL, Mathavan S, Gunaratne PH, Wu J, Garcia AM, Hulyk SW, Fuh E, Yuan Y, Sneed A, Kowis C, Hodgson A, Muzny DM, McPherson J, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madari A, Young AC, Wetherby KD, Granite SJ, Kwong PN, Brinkley CP, Pearson RL, Bouffard GG, Blakesly RW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Griffith M, Griffith OL, Krzywinski MI, Liao N, Morin R, Palmquist D, Petrescu AS, Skalska U, Smailus DE, Stott JM, Schnerch A, Schein JE, Jones SJ, Holt RA, Baross A, Marra MA, Clifton S, Makowski KA, Bosak S, Malek J: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Genome Res. 2004 Oct;14(10B):2121-7. [PubMed:15489334 ]
  3. Hu RM, Han ZG, Song HD, Peng YD, Huang QH, Ren SX, Gu YJ, Huang CH, Li YB, Jiang CL, Fu G, Zhang QH, Gu BW, Dai M, Mao YF, Gao GF, Rong R, Ye M, Zhou J, Xu SH, Gu J, Shi JX, Jin WR, Zhang CK, Wu TM, Huang GY, Chen Z, Chen MD, Chen JL: Gene expression profiling in the human hypothalamus-pituitary-adrenal axis and full-length cDNA cloning. Proc Natl Acad Sci U S A. 2000 Aug 15;97(17):9543-8. [PubMed:10931946 ]
  4. Bechtel S, Rosenfelder H, Duda A, Schmidt CP, Ernst U, Wellenreuther R, Mehrle A, Schuster C, Bahr A, Blocker H, Heubner D, Hoerlein A, Michel G, Wedler H, Kohrer K, Ottenwalder B, Poustka A, Wiemann S, Schupp I: The full-ORF clone resource of the German cDNA Consortium. BMC Genomics. 2007 Oct 31;8:399. [PubMed:17974005 ]
  5. Nagase T, Kikuno R, Ohara O: Prediction of the coding sequences of unidentified human genes. XXI. The complete sequences of 60 new cDNA clones from brain which code for large proteins. DNA Res. 2001 Aug 31;8(4):179-87. [PubMed:11572484 ]
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