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Showing metabocard for DG(18:2(9Z,12Z)/20:1(11Z)/0:0) (HMDB0007253)

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enzymes (132)transporters (1) Show 133 proteins
Record Information
Version5.0
StatusDetected and Quantified
Creation Date2008-09-12 01:17:05 UTC
Update Date2022-03-07 02:49:41 UTC
HMDB IDHMDB0007253
Secondary Accession Numbers
  • HMDB07253
Metabolite Identification
Common NameDG(18:2(9Z,12Z)/20:1(11Z)/0:0)
DescriptionDG(18:2(9Z,12Z)/20:1(11Z)/0:0) is a diglyceride, or a diacylglycerol (DAG). It is a glyceride consisting of two fatty acid chains covalently bonded to a glycerol molecule through ester linkages. Diacylglycerols can have many different combinations of fatty acids attached at both the C-1 and C-2 positions. DG(18:2(9Z,12Z)/20:1(11Z)/0:0), in particular, consists of one chain of linoleic acid at the C-1 position and one chain of eicosenoic acid at the C-2 position. The linoleic acid moiety is derived from seed oils, while the eicosenoic acid moiety is derived from vegetable oils and cod oils. Mono- and diacylglycerols are common food additives used to blend together certain ingredients, such as oil and water, which would not otherwise blend well. Dacylglycerols are often found in bakery products, beverages, ice cream, chewing gum, shortening, whipped toppings, margarine, and confections. Synthesis of diacylglycerol begins with glycerol-3-phosphate, which is derived primarily from dihydroxyacetone phosphate, a product of glycolysis (usually in the cytoplasm of liver or adipose tissue cells). Glycerol-3-phosphate is first acylated with acyl-coenzyme A (acyl-CoA) to form lysophosphatidic acid, which is then acylated with another molecule of acyl-CoA to yield phosphatidic acid. Phosphatidic acid is then de-phosphorylated to form diacylglycerol.Diacylglycerols are precursors to triacylglycerols (triglyceride), which are formed by the addition of a third fatty acid to the diacylglycerol under the catalysis of diglyceride acyltransferase. Since diacylglycerols are synthesized via phosphatidic acid, they will usually contain a saturated fatty acid at the C-1 position on the glycerol moiety and an unsaturated fatty acid at the C-2 position.
Structure
Data?1582752445
MOL3D MOLSDF3D SDFPDB3D PDBSMILESInChI

MOL for HMDB0007253 (DG(18:2(9Z,12Z)/20:1(11Z)/0:0))


  Mrv0541 02231221132D          

 47 46  0  0  1  0            999 V2000
   21.5898   -3.7576    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.9147   -4.1474    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   20.2395   -3.7576    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.2650   -4.1474    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   19.5644   -4.1474    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   20.3879   -4.9270    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   21.5025   -4.9567    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.7038   -4.1474    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4183   -3.7349    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.1328   -4.1474    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.8472   -3.7349    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.5617   -4.1474    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.2762   -3.7349    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.9907   -3.7349    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.7052   -4.1474    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.4196   -3.7349    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.1341   -3.7349    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.8486   -4.1474    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.5631   -3.7349    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.2776   -4.1474    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.9921   -3.7349    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.7065   -4.1474    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.4210   -3.7349    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.1355   -4.1474    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.8499   -3.7349    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.8499   -2.9099    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.0984   -5.3395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8128   -4.9270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5273   -5.3395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2418   -4.9270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.9562   -5.3395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.6707   -4.9270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.3852   -5.3395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.0997   -4.9270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.8142   -5.3395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.5286   -5.3395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.2431   -4.9270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.9576   -5.3395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.6720   -4.9270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.3865   -5.3395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.1010   -4.9270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.8155   -5.3395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.5300   -4.9270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.2444   -5.3395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.9589   -4.9270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.6734   -5.3395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.6734   -6.1645    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  0  0  0  0
  3  2  1  0  0  0  0
  4  1  1  0  0  0  0
  5  3  1  0  0  0  0
  2  6  1  6  0  0  0
  2  7  1  1  0  0  0
  9  8  1  0  0  0  0
 10  9  1  0  0  0  0
 11 10  1  0  0  0  0
 12 11  1  0  0  0  0
 13 12  1  0  0  0  0
 14 13  2  0  0  0  0
 15 14  1  0  0  0  0
 16 15  1  0  0  0  0
 17 16  2  0  0  0  0
 18 17  1  0  0  0  0
 19 18  1  0  0  0  0
 20 19  1  0  0  0  0
 21 20  1  0  0  0  0
 22 21  1  0  0  0  0
 23 22  1  0  0  0  0
 24 23  1  0  0  0  0
 25 24  1  0  0  0  0
 26 25  2  0  0  0  0
  5 25  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
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 31 32  1  0  0  0  0
 32 33  1  0  0  0  0
 33 34  1  0  0  0  0
 34 35  1  0  0  0  0
 35 36  2  0  0  0  0
 36 37  1  0  0  0  0
 37 38  1  0  0  0  0
 38 39  1  0  0  0  0
 39 40  1  0  0  0  0
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 41 42  1  0  0  0  0
 42 43  1  0  0  0  0
 43 44  1  0  0  0  0
 44 45  1  0  0  0  0
 45 46  1  0  0  0  0
 46  6  1  0  0  0  0
 46 47  2  0  0  0  0
M  END
Download

3D MOL for HMDB0007253 (DG(18:2(9Z,12Z)/20:1(11Z)/0:0))

HMDB0007253
     RDKit          3D
DG(18:2(9Z,12Z)/20:1(11Z)/0:0)
120119  0  0  0  0  0  0  0  0999 V2000
   15.7931    1.5965    1.7649 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.8323    0.5672    2.3274 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.7410    0.3841    1.2770 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.7600   -0.6389    1.7788 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.6541   -0.8715    0.7478 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.3032   -1.3359   -0.4746 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.2985   -0.7674   -1.6346 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.6586    0.4753   -2.0383 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.9252    1.2840   -1.0971 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.6141    1.5456   -1.1953 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.8081    1.0199   -2.2879 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.6997    0.1409   -1.8862 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5482    0.6808   -1.1688 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6506    1.3635    0.1234 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3427    1.6761    0.7998 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3705    2.5950    0.2407 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7389    2.3934   -1.0664 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0437    1.0681   -1.2202 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5066    0.8014   -2.3481 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9395    0.1274   -0.2563 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3603   -1.0992   -0.2216 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8993   -1.2749   -0.3763 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.3442   -1.2415   -1.7744 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2110   -1.9216   -2.6206 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0904   -0.6024    0.5507 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6826   -1.2312    1.5133 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6255   -2.4845    1.5279 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5175   -0.4349    2.4530 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3456   -1.3350    3.2939 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2783   -2.2245    2.6155 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3984   -1.7651    1.7940 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1835   -0.9280    0.6038 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5392   -0.6653   -0.1089 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1866   -1.9166   -0.5788 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.4679   -1.5955   -1.3005 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.4897   -0.8967   -0.4232 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.6922   -0.6489   -1.2278 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.9105   -1.1158   -0.9998 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.1869   -1.9744    0.1448 C   0  0  0  0  0  0  0  0  0  0  0  0
  -12.1606   -1.5164    1.1590 C   0  0  0  0  0  0  0  0  0  0  0  0
  -13.5659   -1.2931    0.8166 C   0  0  0  0  0  0  0  0  0  0  0  0
  -13.9574   -0.2915   -0.1889 C   0  0  0  0  0  0  0  0  0  0  0  0
  -13.5060    1.1199    0.1229 C   0  0  0  0  0  0  0  0  0  0  0  0
  -13.9746    2.0768   -0.9768 C   0  0  0  0  0  0  0  0  0  0  0  0
  -13.5437    3.4899   -0.6766 C   0  0  0  0  0  0  0  0  0  0  0  0
  -12.0591    3.6299   -0.5759 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.2123    2.3621    1.2473 H   0  0  0  0  0  0  0  0  0  0  0  0
   16.4283    2.0542    2.5294 H   0  0  0  0  0  0  0  0  0  0  0  0
   16.4122    1.0900    0.9662 H   0  0  0  0  0  0  0  0  0  0  0  0
   15.3154   -0.4198    2.4609 H   0  0  0  0  0  0  0  0  0  0  0  0
   14.3558    0.9701    3.2328 H   0  0  0  0  0  0  0  0  0  0  0  0
   13.2600    1.4034    1.2063 H   0  0  0  0  0  0  0  0  0  0  0  0
   14.1752    0.1678    0.2925 H   0  0  0  0  0  0  0  0  0  0  0  0
   13.3170   -1.5698    1.9841 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.3509   -0.2619    2.7355 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.8771   -0.1533    0.7267 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.1202   -1.8089    1.2029 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.8695   -2.3183   -0.3470 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.8860   -1.3343   -2.4535 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.1716    0.3624   -3.0547 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.5871    1.1623   -2.3278 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.4317    1.7852   -0.2328 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.1854    2.1917   -0.4090 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.3745    0.4778   -3.0873 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.3804    1.9586   -2.8349 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.0906   -0.7571   -1.2893 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.2722   -0.4123   -2.7992 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7786   -0.1646   -1.1076 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0519    1.4219   -1.8917 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.3115    0.8712    0.8391 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1500    2.4077   -0.0293 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5891    2.0679    1.8587 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8415    0.6832    1.0846 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5796    2.7637    1.0563 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8458    3.6373    0.2066 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3236    2.6033   -1.9291 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8951    3.1981   -1.1037 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8397   -1.8350   -0.9463 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6174   -1.5488    0.8016 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7359   -2.3952   -0.0844 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1168   -0.2612   -2.1774 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6342   -1.8121   -1.7358 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4094   -2.7797   -2.2159 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7635    0.1096    3.1376 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9961    0.3810    1.9351 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7966   -0.7891    4.1748 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5888   -2.0115    3.8311 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7208   -3.0363    2.0394 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7765   -2.9032    3.4262 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1762   -1.2813    2.4525 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9082   -2.7195    1.4133 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4798   -1.4133   -0.1065 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8396    0.1151    0.7974 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1437   -0.0564    0.5667 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2799   -0.0610   -0.9975 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5147   -2.5910    0.2726 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5123   -2.4852   -1.2568 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.9035   -2.5950   -1.6008 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2874   -1.0232   -2.2401 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.9830    0.0956   -0.1610 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.5962   -1.4956    0.4777 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.5554    0.0041   -2.1274 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.6986   -0.8279   -1.7338 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.5813   -2.9987   -0.2465 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.2798   -2.3175    0.6997 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.1593   -2.3292    1.9675 H   0  0  0  0  0  0  0  0  0  0  0  0
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M  END
Download

3D SDF for HMDB0007253 (DG(18:2(9Z,12Z)/20:1(11Z)/0:0))


  Mrv0541 02231221132D          

 47 46  0  0  1  0            999 V2000
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    8.1328   -4.1474    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.8472   -3.7349    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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 46 47  2  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0007253

> <DATABASE_NAME>
hmdb

> <SMILES>
[H][C@](CO)(COC(=O)CCCCCCC\C=C/C\C=C/CCCCC)OC(=O)CCCCCCCCC\C=C/CCCCCCCC

> <INCHI_IDENTIFIER>
InChI=1S/C41H74O5/c1-3-5-7-9-11-13-15-17-19-20-22-24-26-28-30-32-34-36-41(44)46-39(37-42)38-45-40(43)35-33-31-29-27-25-23-21-18-16-14-12-10-8-6-4-2/h12,14,17-19,21,39,42H,3-11,13,15-16,20,22-38H2,1-2H3/b14-12-,19-17-,21-18-/t39-/m0/s1

> <INCHI_KEY>
GVVZJFBZNDAOHI-OUXUMZNPSA-N

> <FORMULA>
C41H74O5

> <MOLECULAR_WEIGHT>
647.0233

> <EXACT_MASS>
646.553625478

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_AVERAGE_POLARIZABILITY>
83.5554052409316

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2S)-1-hydroxy-3-[(9Z,12Z)-octadeca-9,12-dienoyloxy]propan-2-yl (11Z)-icos-11-enoate

> <ALOGPS_LOGP>
10.34

> <JCHEM_LOGP>
13.584740801999997

> <ALOGPS_LOGS>
-7.81

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
14.577784010572557

> <JCHEM_PKA_STRONGEST_BASIC>
-2.983477273775563

> <JCHEM_POLAR_SURFACE_AREA>
72.83

> <JCHEM_REFRACTIVITY>
198.65470000000002

> <JCHEM_ROTATABLE_BOND_COUNT>
37

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
1.01e-05 g/l

> <JCHEM_TRADITIONAL_IUPAC>
diacylglycerol

> <JCHEM_VEBER_RULE>
0

$$$$
Download

3D-SDF for HMDB0007253 (DG(18:2(9Z,12Z)/20:1(11Z)/0:0))

HMDB0007253
     RDKit          3D
DG(18:2(9Z,12Z)/20:1(11Z)/0:0)
120119  0  0  0  0  0  0  0  0999 V2000
   15.7931    1.5965    1.7649 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.8323    0.5672    2.3274 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.7410    0.3841    1.2770 C   0  0  0  0  0  0  0  0  0  0  0  0
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   11.6541   -0.8715    0.7478 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.3032   -1.3359   -0.4746 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.2985   -0.7674   -1.6346 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.6586    0.4753   -2.0383 C   0  0  0  0  0  0  0  0  0  0  0  0
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    9.6141    1.5456   -1.1953 C   0  0  0  0  0  0  0  0  0  0  0  0
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    6.6506    1.3635    0.1234 C   0  0  0  0  0  0  0  0  0  0  0  0
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    3.0437    1.0681   -1.2202 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5066    0.8014   -2.3481 O   0  0  0  0  0  0  0  0  0  0  0  0
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    1.2110   -1.9216   -2.6206 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0904   -0.6024    0.5507 O   0  0  0  0  0  0  0  0  0  0  0  0
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   15.2123    2.3621    1.2473 H   0  0  0  0  0  0  0  0  0  0  0  0
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   11.4317    1.7852   -0.2328 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.1854    2.1917   -0.4090 H   0  0  0  0  0  0  0  0  0  0  0  0
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    8.0906   -0.7571   -1.2893 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.2722   -0.4123   -2.7992 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7786   -0.1646   -1.1076 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0519    1.4219   -1.8917 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.3115    0.8712    0.8391 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1500    2.4077   -0.0293 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5891    2.0679    1.8587 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8415    0.6832    1.0846 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5796    2.7637    1.0563 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8458    3.6373    0.2066 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3236    2.6033   -1.9291 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8951    3.1981   -1.1037 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8397   -1.8350   -0.9463 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6174   -1.5488    0.8016 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7359   -2.3952   -0.0844 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1168   -0.2612   -2.1774 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6342   -1.8121   -1.7358 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4094   -2.7797   -2.2159 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7635    0.1096    3.1376 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9961    0.3810    1.9351 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7966   -0.7891    4.1748 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5888   -2.0115    3.8311 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7208   -3.0363    2.0394 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7765   -2.9032    3.4262 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1762   -1.2813    2.4525 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9082   -2.7195    1.4133 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4798   -1.4133   -0.1065 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8396    0.1151    0.7974 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1437   -0.0564    0.5667 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2799   -0.0610   -0.9975 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5147   -2.5910    0.2726 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5123   -2.4852   -1.2568 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.9035   -2.5950   -1.6008 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2874   -1.0232   -2.2401 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.9830    0.0956   -0.1610 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.5962   -1.4956    0.4777 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.5554    0.0041   -2.1274 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.6986   -0.8279   -1.7338 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.5813   -2.9987   -0.2465 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.2798   -2.3175    0.6997 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.1593   -2.3292    1.9675 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.6904   -0.6577    1.7207 H   0  0  0  0  0  0  0  0  0  0  0  0
  -13.9846   -2.2848    0.4613 H   0  0  0  0  0  0  0  0  0  0  0  0
  -14.1369   -1.1279    1.7772 H   0  0  0  0  0  0  0  0  0  0  0  0
  -13.8704   -0.5845   -1.2416 H   0  0  0  0  0  0  0  0  0  0  0  0
  -15.1115   -0.2048   -0.0756 H   0  0  0  0  0  0  0  0  0  0  0  0
  -13.9292    1.4854    1.0632 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.3961    1.1274    0.0716 H   0  0  0  0  0  0  0  0  0  0  0  0
  -13.6021    1.8008   -1.9735 H   0  0  0  0  0  0  0  0  0  0  0  0
  -15.0856    2.0459   -1.0222 H   0  0  0  0  0  0  0  0  0  0  0  0
  -13.9649    3.7052    0.3515 H   0  0  0  0  0  0  0  0  0  0  0  0
  -13.9967    4.1642   -1.4288 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.8036    4.6887   -0.4082 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.5983    3.2732   -1.5194 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.6760    3.0260    0.2631 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
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 46119  1  0
 46120  1  0
M  END
Download

PDB for HMDB0007253 (DG(18:2(9Z,12Z)/20:1(11Z)/0:0))

HEADER    PROTEIN                                 23-FEB-12   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   23-FEB-12         0                                  
HETATM    1  C   UNK     0      40.301  -7.014   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      39.041  -7.742   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      37.780  -7.014   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0      41.561  -7.742   0.000  0.00  0.00           O+0
HETATM    5  O   UNK     0      36.520  -7.742   0.000  0.00  0.00           O+0
HETATM    6  O   UNK     0      38.057  -9.197   0.000  0.00  0.00           O+0
HETATM    7  H   UNK     0      40.138  -9.253   0.000  0.00  0.00           H+0
HETATM    8  C   UNK     0      12.514  -7.742   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      13.847  -6.972   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      15.181  -7.742   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      16.515  -6.972   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      17.849  -7.742   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      19.182  -6.972   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      20.516  -6.972   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      21.850  -7.742   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      23.183  -6.972   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      24.517  -6.972   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      25.851  -7.742   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      27.184  -6.972   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      28.518  -7.742   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      29.852  -6.972   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      31.185  -7.742   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      32.519  -6.972   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      33.853  -7.742   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      35.186  -6.972   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0      35.186  -5.432   0.000  0.00  0.00           O+0
HETATM   27  C   UNK     0      11.384  -9.967   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      12.717  -9.197   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      14.051  -9.967   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0      15.385  -9.197   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0      16.718  -9.967   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0      18.052  -9.197   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0      19.386  -9.967   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0      20.719  -9.197   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0      22.053  -9.967   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0      23.387  -9.967   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0      24.720  -9.197   0.000  0.00  0.00           C+0
HETATM   38  C   UNK     0      26.054  -9.967   0.000  0.00  0.00           C+0
HETATM   39  C   UNK     0      27.388  -9.197   0.000  0.00  0.00           C+0
HETATM   40  C   UNK     0      28.721  -9.967   0.000  0.00  0.00           C+0
HETATM   41  C   UNK     0      30.055  -9.197   0.000  0.00  0.00           C+0
HETATM   42  C   UNK     0      31.389  -9.967   0.000  0.00  0.00           C+0
HETATM   43  C   UNK     0      32.723  -9.197   0.000  0.00  0.00           C+0
HETATM   44  C   UNK     0      34.056  -9.967   0.000  0.00  0.00           C+0
HETATM   45  C   UNK     0      35.390  -9.197   0.000  0.00  0.00           C+0
HETATM   46  C   UNK     0      36.724  -9.967   0.000  0.00  0.00           C+0
HETATM   47  O   UNK     0      36.724 -11.507   0.000  0.00  0.00           O+0
CONECT    1    2    4                                                       
CONECT    2    1    3    6    7                                             
CONECT    3    2    5                                                       
CONECT    4    1                                                            
CONECT    5    3   25                                                       
CONECT    6    2   46                                                       
CONECT    7    2                                                            
CONECT    8    9                                                            
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   21                                                       
CONECT   21   20   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   24                                                       
CONECT   24   23   25                                                       
CONECT   25   24   26    5                                                  
CONECT   26   25                                                            
CONECT   27   28                                                            
CONECT   28   27   29                                                       
CONECT   29   28   30                                                       
CONECT   30   29   31                                                       
CONECT   31   30   32                                                       
CONECT   32   31   33                                                       
CONECT   33   32   34                                                       
CONECT   34   33   35                                                       
CONECT   35   34   36                                                       
CONECT   36   35   37                                                       
CONECT   37   36   38                                                       
CONECT   38   37   39                                                       
CONECT   39   38   40                                                       
CONECT   40   39   41                                                       
CONECT   41   40   42                                                       
CONECT   42   41   43                                                       
CONECT   43   42   44                                                       
CONECT   44   43   45                                                       
CONECT   45   44   46                                                       
CONECT   46   45    6   47                                                  
CONECT   47   46                                                            
MASTER        0    0    0    0    0    0    0    0   47    0   92    0
END
Download

3D PDB for HMDB0007253 (DG(18:2(9Z,12Z)/20:1(11Z)/0:0))

COMPND    HMDB0007253
HETATM    1  C1  UNL     1      15.793   1.597   1.765  1.00  0.00           C  
HETATM    2  C2  UNL     1      14.832   0.567   2.327  1.00  0.00           C  
HETATM    3  C3  UNL     1      13.741   0.384   1.277  1.00  0.00           C  
HETATM    4  C4  UNL     1      12.760  -0.639   1.779  1.00  0.00           C  
HETATM    5  C5  UNL     1      11.654  -0.872   0.748  1.00  0.00           C  
HETATM    6  C6  UNL     1      12.303  -1.336  -0.475  1.00  0.00           C  
HETATM    7  C7  UNL     1      12.299  -0.767  -1.635  1.00  0.00           C  
HETATM    8  C8  UNL     1      11.659   0.475  -2.038  1.00  0.00           C  
HETATM    9  C9  UNL     1      10.925   1.284  -1.097  1.00  0.00           C  
HETATM   10  C10 UNL     1       9.614   1.546  -1.195  1.00  0.00           C  
HETATM   11  C11 UNL     1       8.808   1.020  -2.288  1.00  0.00           C  
HETATM   12  C12 UNL     1       7.700   0.141  -1.886  1.00  0.00           C  
HETATM   13  C13 UNL     1       6.548   0.681  -1.169  1.00  0.00           C  
HETATM   14  C14 UNL     1       6.651   1.364   0.123  1.00  0.00           C  
HETATM   15  C15 UNL     1       5.343   1.676   0.800  1.00  0.00           C  
HETATM   16  C16 UNL     1       4.370   2.595   0.241  1.00  0.00           C  
HETATM   17  C17 UNL     1       3.739   2.393  -1.066  1.00  0.00           C  
HETATM   18  C18 UNL     1       3.044   1.068  -1.220  1.00  0.00           C  
HETATM   19  O1  UNL     1       2.507   0.801  -2.348  1.00  0.00           O  
HETATM   20  O2  UNL     1       2.939   0.127  -0.256  1.00  0.00           O  
HETATM   21  C19 UNL     1       2.360  -1.099  -0.222  1.00  0.00           C  
HETATM   22  C20 UNL     1       0.899  -1.275  -0.376  1.00  0.00           C  
HETATM   23  C21 UNL     1       0.344  -1.242  -1.774  1.00  0.00           C  
HETATM   24  O3  UNL     1       1.211  -1.922  -2.621  1.00  0.00           O  
HETATM   25  O4  UNL     1       0.090  -0.602   0.551  1.00  0.00           O  
HETATM   26  C22 UNL     1      -0.683  -1.231   1.513  1.00  0.00           C  
HETATM   27  O5  UNL     1      -0.625  -2.485   1.528  1.00  0.00           O  
HETATM   28  C23 UNL     1      -1.517  -0.435   2.453  1.00  0.00           C  
HETATM   29  C24 UNL     1      -2.346  -1.335   3.294  1.00  0.00           C  
HETATM   30  C25 UNL     1      -3.278  -2.224   2.616  1.00  0.00           C  
HETATM   31  C26 UNL     1      -4.398  -1.765   1.794  1.00  0.00           C  
HETATM   32  C27 UNL     1      -4.184  -0.928   0.604  1.00  0.00           C  
HETATM   33  C28 UNL     1      -5.539  -0.665  -0.109  1.00  0.00           C  
HETATM   34  C29 UNL     1      -6.187  -1.917  -0.579  1.00  0.00           C  
HETATM   35  C30 UNL     1      -7.468  -1.596  -1.301  1.00  0.00           C  
HETATM   36  C31 UNL     1      -8.490  -0.897  -0.423  1.00  0.00           C  
HETATM   37  C32 UNL     1      -9.692  -0.649  -1.228  1.00  0.00           C  
HETATM   38  C33 UNL     1     -10.910  -1.116  -1.000  1.00  0.00           C  
HETATM   39  C34 UNL     1     -11.187  -1.974   0.145  1.00  0.00           C  
HETATM   40  C35 UNL     1     -12.161  -1.516   1.159  1.00  0.00           C  
HETATM   41  C36 UNL     1     -13.566  -1.293   0.817  1.00  0.00           C  
HETATM   42  C37 UNL     1     -13.957  -0.291  -0.189  1.00  0.00           C  
HETATM   43  C38 UNL     1     -13.506   1.120   0.123  1.00  0.00           C  
HETATM   44  C39 UNL     1     -13.975   2.077  -0.977  1.00  0.00           C  
HETATM   45  C40 UNL     1     -13.544   3.490  -0.677  1.00  0.00           C  
HETATM   46  C41 UNL     1     -12.059   3.630  -0.576  1.00  0.00           C  
HETATM   47  H1  UNL     1      15.212   2.362   1.247  1.00  0.00           H  
HETATM   48  H2  UNL     1      16.428   2.054   2.529  1.00  0.00           H  
HETATM   49  H3  UNL     1      16.412   1.090   0.966  1.00  0.00           H  
HETATM   50  H4  UNL     1      15.315  -0.420   2.461  1.00  0.00           H  
HETATM   51  H5  UNL     1      14.356   0.970   3.233  1.00  0.00           H  
HETATM   52  H6  UNL     1      13.260   1.403   1.206  1.00  0.00           H  
HETATM   53  H7  UNL     1      14.175   0.168   0.293  1.00  0.00           H  
HETATM   54  H8  UNL     1      13.317  -1.570   1.984  1.00  0.00           H  
HETATM   55  H9  UNL     1      12.351  -0.262   2.735  1.00  0.00           H  
HETATM   56  H10 UNL     1      10.877  -0.153   0.727  1.00  0.00           H  
HETATM   57  H11 UNL     1      11.120  -1.809   1.203  1.00  0.00           H  
HETATM   58  H12 UNL     1      12.870  -2.318  -0.347  1.00  0.00           H  
HETATM   59  H13 UNL     1      12.886  -1.334  -2.453  1.00  0.00           H  
HETATM   60  H14 UNL     1      11.172   0.362  -3.055  1.00  0.00           H  
HETATM   61  H15 UNL     1      12.587   1.162  -2.328  1.00  0.00           H  
HETATM   62  H16 UNL     1      11.432   1.785  -0.233  1.00  0.00           H  
HETATM   63  H17 UNL     1       9.185   2.192  -0.409  1.00  0.00           H  
HETATM   64  H18 UNL     1       9.374   0.478  -3.087  1.00  0.00           H  
HETATM   65  H19 UNL     1       8.380   1.959  -2.835  1.00  0.00           H  
HETATM   66  H20 UNL     1       8.091  -0.757  -1.289  1.00  0.00           H  
HETATM   67  H21 UNL     1       7.272  -0.412  -2.799  1.00  0.00           H  
HETATM   68  H22 UNL     1       5.779  -0.165  -1.108  1.00  0.00           H  
HETATM   69  H23 UNL     1       6.052   1.422  -1.892  1.00  0.00           H  
HETATM   70  H24 UNL     1       7.311   0.871   0.839  1.00  0.00           H  
HETATM   71  H25 UNL     1       7.150   2.408  -0.029  1.00  0.00           H  
HETATM   72  H26 UNL     1       5.589   2.068   1.859  1.00  0.00           H  
HETATM   73  H27 UNL     1       4.841   0.683   1.085  1.00  0.00           H  
HETATM   74  H28 UNL     1       3.580   2.764   1.056  1.00  0.00           H  
HETATM   75  H29 UNL     1       4.846   3.637   0.207  1.00  0.00           H  
HETATM   76  H30 UNL     1       4.324   2.603  -1.929  1.00  0.00           H  
HETATM   77  H31 UNL     1       2.895   3.198  -1.104  1.00  0.00           H  
HETATM   78  H32 UNL     1       2.840  -1.835  -0.946  1.00  0.00           H  
HETATM   79  H33 UNL     1       2.617  -1.549   0.802  1.00  0.00           H  
HETATM   80  H34 UNL     1       0.736  -2.395  -0.084  1.00  0.00           H  
HETATM   81  H35 UNL     1       0.117  -0.261  -2.177  1.00  0.00           H  
HETATM   82  H36 UNL     1      -0.634  -1.812  -1.736  1.00  0.00           H  
HETATM   83  H37 UNL     1       1.409  -2.780  -2.216  1.00  0.00           H  
HETATM   84  H38 UNL     1      -0.763   0.110   3.138  1.00  0.00           H  
HETATM   85  H39 UNL     1      -1.996   0.381   1.935  1.00  0.00           H  
HETATM   86  H40 UNL     1      -2.797  -0.789   4.175  1.00  0.00           H  
HETATM   87  H41 UNL     1      -1.589  -2.012   3.831  1.00  0.00           H  
HETATM   88  H42 UNL     1      -2.721  -3.036   2.039  1.00  0.00           H  
HETATM   89  H43 UNL     1      -3.777  -2.903   3.426  1.00  0.00           H  
HETATM   90  H44 UNL     1      -5.176  -1.281   2.452  1.00  0.00           H  
HETATM   91  H45 UNL     1      -4.908  -2.719   1.413  1.00  0.00           H  
HETATM   92  H46 UNL     1      -3.480  -1.413  -0.107  1.00  0.00           H  
HETATM   93  H47 UNL     1      -3.840   0.115   0.797  1.00  0.00           H  
HETATM   94  H48 UNL     1      -6.144  -0.056   0.567  1.00  0.00           H  
HETATM   95  H49 UNL     1      -5.280  -0.061  -0.997  1.00  0.00           H  
HETATM   96  H50 UNL     1      -6.515  -2.591   0.273  1.00  0.00           H  
HETATM   97  H51 UNL     1      -5.512  -2.485  -1.257  1.00  0.00           H  
HETATM   98  H52 UNL     1      -7.903  -2.595  -1.601  1.00  0.00           H  
HETATM   99  H53 UNL     1      -7.287  -1.023  -2.240  1.00  0.00           H  
HETATM  100  H54 UNL     1      -7.983   0.096  -0.161  1.00  0.00           H  
HETATM  101  H55 UNL     1      -8.596  -1.496   0.478  1.00  0.00           H  
HETATM  102  H56 UNL     1      -9.555   0.004  -2.127  1.00  0.00           H  
HETATM  103  H57 UNL     1     -11.699  -0.828  -1.734  1.00  0.00           H  
HETATM  104  H58 UNL     1     -11.581  -2.999  -0.247  1.00  0.00           H  
HETATM  105  H59 UNL     1     -10.280  -2.318   0.700  1.00  0.00           H  
HETATM  106  H60 UNL     1     -12.159  -2.329   1.967  1.00  0.00           H  
HETATM  107  H61 UNL     1     -11.690  -0.658   1.721  1.00  0.00           H  
HETATM  108  H62 UNL     1     -13.985  -2.285   0.461  1.00  0.00           H  
HETATM  109  H63 UNL     1     -14.137  -1.128   1.777  1.00  0.00           H  
HETATM  110  H64 UNL     1     -13.870  -0.584  -1.242  1.00  0.00           H  
HETATM  111  H65 UNL     1     -15.112  -0.205  -0.076  1.00  0.00           H  
HETATM  112  H66 UNL     1     -13.929   1.485   1.063  1.00  0.00           H  
HETATM  113  H67 UNL     1     -12.396   1.127   0.072  1.00  0.00           H  
HETATM  114  H68 UNL     1     -13.602   1.801  -1.973  1.00  0.00           H  
HETATM  115  H69 UNL     1     -15.086   2.046  -1.022  1.00  0.00           H  
HETATM  116  H70 UNL     1     -13.965   3.705   0.351  1.00  0.00           H  
HETATM  117  H71 UNL     1     -13.997   4.164  -1.429  1.00  0.00           H  
HETATM  118  H72 UNL     1     -11.804   4.689  -0.408  1.00  0.00           H  
HETATM  119  H73 UNL     1     -11.598   3.273  -1.519  1.00  0.00           H  
HETATM  120  H74 UNL     1     -11.676   3.026   0.263  1.00  0.00           H  
CONECT    1    2   47   48   49
CONECT    2    3   50   51
CONECT    3    4   52   53
CONECT    4    5   54   55
CONECT    5    6   56   57
CONECT    6    7    7   58
CONECT    7    8   59
CONECT    8    9   60   61
CONECT    9   10   10   62
CONECT   10   11   63
CONECT   11   12   64   65
CONECT   12   13   66   67
CONECT   13   14   68   69
CONECT   14   15   70   71
CONECT   15   16   72   73
CONECT   16   17   74   75
CONECT   17   18   76   77
CONECT   18   19   19   20
CONECT   20   21
CONECT   21   22   78   79
CONECT   22   23   25   80
CONECT   23   24   81   82
CONECT   24   83
CONECT   25   26
CONECT   26   27   27   28
CONECT   28   29   84   85
CONECT   29   30   86   87
CONECT   30   31   88   89
CONECT   31   32   90   91
CONECT   32   33   92   93
CONECT   33   34   94   95
CONECT   34   35   96   97
CONECT   35   36   98   99
CONECT   36   37  100  101
CONECT   37   38   38  102
CONECT   38   39  103
CONECT   39   40  104  105
CONECT   40   41  106  107
CONECT   41   42  108  109
CONECT   42   43  110  111
CONECT   43   44  112  113
CONECT   44   45  114  115
CONECT   45   46  116  117
CONECT   46  118  119  120
END
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SMILES for HMDB0007253 (DG(18:2(9Z,12Z)/20:1(11Z)/0:0))

[H][C@](CO)(COC(=O)CCCCCCC\C=C/C\C=C/CCCCC)OC(=O)CCCCCCCCC\C=C/CCCCCCCC
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INCHI for HMDB0007253 (DG(18:2(9Z,12Z)/20:1(11Z)/0:0))

InChI=1S/C41H74O5/c1-3-5-7-9-11-13-15-17-19-20-22-24-26-28-30-32-34-36-41(44)46-39(37-42)38-45-40(43)35-33-31-29-27-25-23-21-18-16-14-12-10-8-6-4-2/h12,14,17-19,21,39,42H,3-11,13,15-16,20,22-38H2,1-2H3/b14-12-,19-17-,21-18-/t39-/m0/s1
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View in JSmolView Stereo Labels
Synonyms
ValueSource
Diacylglycerol(18:2/20:1)HMDB
DG(18:2/20:1)HMDB
Diacylglycerol(38:3)HMDB
DiglycerideHMDB
DAG(18:2/20:1)HMDB
DG(38:3)HMDB
DiacylglycerolHMDB
1-Linoleoyl-2-eicosenoyl-sn-glycerolHMDB
1-(9Z,12Z-Octadecadienoyl)-2-(11-eicosenoyl)-sn-glycerolHMDB
DAG(38:3)HMDB
DG(18:2(9Z,12Z)/20:1(11Z)/0:0)Lipid Annotator
Chemical FormulaC41H74O5
Average Molecular Weight647.0233
Monoisotopic Molecular Weight646.553625478
IUPAC Name(2S)-1-hydroxy-3-[(9Z,12Z)-octadeca-9,12-dienoyloxy]propan-2-yl (11Z)-icos-11-enoate
Traditional Namediacylglycerol
CAS Registry NumberNot Available
SMILES
[H][C@](CO)(COC(=O)CCCCCCC\C=C/C\C=C/CCCCC)OC(=O)CCCCCCCCC\C=C/CCCCCCCC
InChI Identifier
InChI=1S/C41H74O5/c1-3-5-7-9-11-13-15-17-19-20-22-24-26-28-30-32-34-36-41(44)46-39(37-42)38-45-40(43)35-33-31-29-27-25-23-21-18-16-14-12-10-8-6-4-2/h12,14,17-19,21,39,42H,3-11,13,15-16,20,22-38H2,1-2H3/b14-12-,19-17-,21-18-/t39-/m0/s1
InChI KeyGVVZJFBZNDAOHI-OUXUMZNPSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as 1,2-diacylglycerols. These are diacylglycerols containing a glycerol acylated at positions 1 and 2.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassGlycerolipids
Sub ClassDiradylglycerols
Direct Parent1,2-diacylglycerols
Alternative Parents
Substituents
  • 1,2-acyl-sn-glycerol
  • Fatty acid ester
  • Fatty acyl
  • Dicarboxylic acid or derivatives
  • Carboxylic acid ester
  • Carboxylic acid derivative
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Primary alcohol
  • Organooxygen compound
  • Carbonyl group
  • Alcohol
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External Descriptors
Ontology
Physiological effect
Health effect
Disposition
Biological locationSource
Process
Naturally occurring process