Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:47:00 UTC
Update Date2022-03-07 02:53:12 UTC
HMDB IDHMDB0031981
Secondary Accession Numbers
  • HMDB31981
Metabolite Identification
Common NameNiazidin
DescriptionNiazidin is a glycoside that has been isolated from the fresh pods of Moringa oleifera (horseradish tree). Niazidin is found in fats and oils.
Structure
Data?1601249049
Synonyms
ValueSource
(e)-O-Cyano 4-(alpha-L-rhamnosyloxy)benzenethiocarbamateHMDB
(e)-O-Cyano 4-(α-L-rhamnosyloxy)benzenethiocarbamateHMDB
NiazidinHMDB
Chemical FormulaC15H18N2O6S
Average Molecular Weight354.38
Monoisotopic Molecular Weight354.088557482
IUPAC Name[(4-{[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy}phenyl)methyl]carbamothioyl cyanate
Traditional Name[(4-{[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy}phenyl)methyl]carbamothioyl cyanate
CAS Registry Number198969-42-5
SMILES
C[C@@H]1O[C@@H](OC2=CC=C(CNC(=S)OC#N)C=C2)[C@H](O)[C@H](O)[C@H]1O
InChI Identifier
InChI=1S/C15H18N2O6S/c1-8-11(18)12(19)13(20)14(22-8)23-10-4-2-9(3-5-10)6-17-15(24)21-7-16/h2-5,8,11-14,18-20H,6H2,1H3,(H,17,24)/t8-,11-,12+,13+,14-/m0/s1
InChI KeyNYQKSLDPYVPTRT-CNJBRALLSA-N
Chemical Taxonomy
ClassificationNot classified
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water Solubility2095 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.18 g/LALOGPS
logP0.73ALOGPS
logP0.88ChemAxon
logS-3.4ALOGPS
pKa (Strongest Acidic)6.1ChemAxon
pKa (Strongest Basic)-3.6ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count4ChemAxon
Polar Surface Area124.2 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity87.13 m³·mol⁻¹ChemAxon
Polarizability34.59 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+173.86330932474
DeepCCS[M-H]-171.49230932474
DeepCCS[M-2H]-205.39630932474
DeepCCS[M+Na]+180.67130932474
AllCCS[M+H]+180.632859911
AllCCS[M+H-H2O]+177.932859911
AllCCS[M+NH4]+183.232859911
AllCCS[M+Na]+183.932859911
AllCCS[M-H]-179.232859911
AllCCS[M+Na-2H]-179.432859911
AllCCS[M+HCOO]-179.832859911

Predicted Retention Times

Underivatized

Chromatographic MethodRetention TimeReference
Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. Predicted by Afia on May 17, 2022.4.14 minutes32390414
Predicted by Siyang on May 30, 202210.1803 minutes33406817
Predicted by Siyang using ReTip algorithm on June 8, 20223.38 minutes32390414
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid1041.6 seconds40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid207.5 seconds40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid90.2 seconds40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid168.8 seconds40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid54.7 seconds40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid279.3 seconds40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid314.1 seconds40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)484.1 seconds40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid631.9 seconds40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid277.8 seconds40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid840.8 seconds40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid185.4 seconds40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid214.9 seconds40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate433.6 seconds40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA352.0 seconds40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water141.0 seconds40023050

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
NiazidinC[C@@H]1O[C@@H](OC2=CC=C(CNC(=S)OC#N)C=C2)[C@H](O)[C@H](O)[C@H]1O4670.9Standard polar33892256
NiazidinC[C@@H]1O[C@@H](OC2=CC=C(CNC(=S)OC#N)C=C2)[C@H](O)[C@H](O)[C@H]1O2537.8Standard non polar33892256
NiazidinC[C@@H]1O[C@@H](OC2=CC=C(CNC(=S)OC#N)C=C2)[C@H](O)[C@H](O)[C@H]1O3253.8Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Niazidin,1TMS,isomer #1C[C@@H]1O[C@@H](OC2=CC=C(CNC(=S)OC#N)C=C2)[C@H](O[Si](C)(C)C)[C@H](O)[C@H]1O2929.8Semi standard non polar33892256
Niazidin,1TMS,isomer #2C[C@@H]1O[C@@H](OC2=CC=C(CNC(=S)OC#N)C=C2)[C@H](O)[C@H](O[Si](C)(C)C)[C@H]1O2956.2Semi standard non polar33892256
Niazidin,1TMS,isomer #3C[C@@H]1O[C@@H](OC2=CC=C(CNC(=S)OC#N)C=C2)[C@H](O)[C@H](O)[C@H]1O[Si](C)(C)C2955.7Semi standard non polar33892256
Niazidin,1TMS,isomer #4C[C@@H]1O[C@@H](OC2=CC=C(CN(C(=S)OC#N)[Si](C)(C)C)C=C2)[C@H](O)[C@H](O)[C@H]1O2873.7Semi standard non polar33892256
Niazidin,2TMS,isomer #1C[C@@H]1O[C@@H](OC2=CC=C(CNC(=S)OC#N)C=C2)[C@H](O[Si](C)(C)C)[C@H](O[Si](C)(C)C)[C@H]1O2884.8Semi standard non polar33892256
Niazidin,2TMS,isomer #2C[C@@H]1O[C@@H](OC2=CC=C(CNC(=S)OC#N)C=C2)[C@H](O[Si](C)(C)C)[C@H](O)[C@H]1O[Si](C)(C)C2904.3Semi standard non polar33892256
Niazidin,2TMS,isomer #3C[C@@H]1O[C@@H](OC2=CC=C(CN(C(=S)OC#N)[Si](C)(C)C)C=C2)[C@H](O[Si](C)(C)C)[C@H](O)[C@H]1O2841.2Semi standard non polar33892256
Niazidin,2TMS,isomer #4C[C@@H]1O[C@@H](OC2=CC=C(CNC(=S)OC#N)C=C2)[C@H](O)[C@H](O[Si](C)(C)C)[C@H]1O[Si](C)(C)C2904.1Semi standard non polar33892256
Niazidin,2TMS,isomer #5C[C@@H]1O[C@@H](OC2=CC=C(CN(C(=S)OC#N)[Si](C)(C)C)C=C2)[C@H](O)[C@H](O[Si](C)(C)C)[C@H]1O2855.4Semi standard non polar33892256
Niazidin,2TMS,isomer #6C[C@@H]1O[C@@H](OC2=CC=C(CN(C(=S)OC#N)[Si](C)(C)C)C=C2)[C@H](O)[C@H](O)[C@H]1O[Si](C)(C)C2872.2Semi standard non polar33892256
Niazidin,3TMS,isomer #1C[C@@H]1O[C@@H](OC2=CC=C(CNC(=S)OC#N)C=C2)[C@H](O[Si](C)(C)C)[C@H](O[Si](C)(C)C)[C@H]1O[Si](C)(C)C2844.2Semi standard non polar33892256
Niazidin,3TMS,isomer #2C[C@@H]1O[C@@H](OC2=CC=C(CN(C(=S)OC#N)[Si](C)(C)C)C=C2)[C@H](O[Si](C)(C)C)[C@H](O[Si](C)(C)C)[C@H]1O2835.0Semi standard non polar33892256
Niazidin,3TMS,isomer #3C[C@@H]1O[C@@H](OC2=CC=C(CN(C(=S)OC#N)[Si](C)(C)C)C=C2)[C@H](O[Si](C)(C)C)[C@H](O)[C@H]1O[Si](C)(C)C2845.9Semi standard non polar33892256
Niazidin,3TMS,isomer #4C[C@@H]1O[C@@H](OC2=CC=C(CN(C(=S)OC#N)[Si](C)(C)C)C=C2)[C@H](O)[C@H](O[Si](C)(C)C)[C@H]1O[Si](C)(C)C2839.9Semi standard non polar33892256
Niazidin,4TMS,isomer #1C[C@@H]1O[C@@H](OC2=CC=C(CN(C(=S)OC#N)[Si](C)(C)C)C=C2)[C@H](O[Si](C)(C)C)[C@H](O[Si](C)(C)C)[C@H]1O[Si](C)(C)C2816.4Semi standard non polar33892256
Niazidin,4TMS,isomer #1C[C@@H]1O[C@@H](OC2=CC=C(CN(C(=S)OC#N)[Si](C)(C)C)C=C2)[C@H](O[Si](C)(C)C)[C@H](O[Si](C)(C)C)[C@H]1O[Si](C)(C)C2644.4Standard non polar33892256
Niazidin,1TBDMS,isomer #1C[C@@H]1O[C@@H](OC2=CC=C(CNC(=S)OC#N)C=C2)[C@H](O[Si](C)(C)C(C)(C)C)[C@H](O)[C@H]1O3149.8Semi standard non polar33892256
Niazidin,1TBDMS,isomer #2C[C@@H]1O[C@@H](OC2=CC=C(CNC(=S)OC#N)C=C2)[C@H](O)[C@H](O[Si](C)(C)C(C)(C)C)[C@H]1O3159.6Semi standard non polar33892256
Niazidin,1TBDMS,isomer #3C[C@@H]1O[C@@H](OC2=CC=C(CNC(=S)OC#N)C=C2)[C@H](O)[C@H](O)[C@H]1O[Si](C)(C)C(C)(C)C3175.8Semi standard non polar33892256
Niazidin,1TBDMS,isomer #4C[C@@H]1O[C@@H](OC2=CC=C(CN(C(=S)OC#N)[Si](C)(C)C(C)(C)C)C=C2)[C@H](O)[C@H](O)[C@H]1O3183.1Semi standard non polar33892256
Niazidin,2TBDMS,isomer #1C[C@@H]1O[C@@H](OC2=CC=C(CNC(=S)OC#N)C=C2)[C@H](O[Si](C)(C)C(C)(C)C)[C@H](O[Si](C)(C)C(C)(C)C)[C@H]1O3296.9Semi standard non polar33892256
Niazidin,2TBDMS,isomer #2C[C@@H]1O[C@@H](OC2=CC=C(CNC(=S)OC#N)C=C2)[C@H](O[Si](C)(C)C(C)(C)C)[C@H](O)[C@H]1O[Si](C)(C)C(C)(C)C3300.8Semi standard non polar33892256
Niazidin,2TBDMS,isomer #3C[C@@H]1O[C@@H](OC2=CC=C(CN(C(=S)OC#N)[Si](C)(C)C(C)(C)C)C=C2)[C@H](O[Si](C)(C)C(C)(C)C)[C@H](O)[C@H]1O3333.1Semi standard non polar33892256
Niazidin,2TBDMS,isomer #4C[C@@H]1O[C@@H](OC2=CC=C(CNC(=S)OC#N)C=C2)[C@H](O)[C@H](O[Si](C)(C)C(C)(C)C)[C@H]1O[Si](C)(C)C(C)(C)C3303.4Semi standard non polar33892256
Niazidin,2TBDMS,isomer #5C[C@@H]1O[C@@H](OC2=CC=C(CN(C(=S)OC#N)[Si](C)(C)C(C)(C)C)C=C2)[C@H](O)[C@H](O[Si](C)(C)C(C)(C)C)[C@H]1O3328.3Semi standard non polar33892256
Niazidin,2TBDMS,isomer #6C[C@@H]1O[C@@H](OC2=CC=C(CN(C(=S)OC#N)[Si](C)(C)C(C)(C)C)C=C2)[C@H](O)[C@H](O)[C@H]1O[Si](C)(C)C(C)(C)C3356.6Semi standard non polar33892256
Niazidin,3TBDMS,isomer #1C[C@@H]1O[C@@H](OC2=CC=C(CNC(=S)OC#N)C=C2)[C@H](O[Si](C)(C)C(C)(C)C)[C@H](O[Si](C)(C)C(C)(C)C)[C@H]1O[Si](C)(C)C(C)(C)C3431.5Semi standard non polar33892256
Niazidin,3TBDMS,isomer #2C[C@@H]1O[C@@H](OC2=CC=C(CN(C(=S)OC#N)[Si](C)(C)C(C)(C)C)C=C2)[C@H](O[Si](C)(C)C(C)(C)C)[C@H](O[Si](C)(C)C(C)(C)C)[C@H]1O3468.4Semi standard non polar33892256
Niazidin,3TBDMS,isomer #3C[C@@H]1O[C@@H](OC2=CC=C(CN(C(=S)OC#N)[Si](C)(C)C(C)(C)C)C=C2)[C@H](O[Si](C)(C)C(C)(C)C)[C@H](O)[C@H]1O[Si](C)(C)C(C)(C)C3463.1Semi standard non polar33892256
Niazidin,3TBDMS,isomer #4C[C@@H]1O[C@@H](OC2=CC=C(CN(C(=S)OC#N)[Si](C)(C)C(C)(C)C)C=C2)[C@H](O)[C@H](O[Si](C)(C)C(C)(C)C)[C@H]1O[Si](C)(C)C(C)(C)C3458.6Semi standard non polar33892256
Niazidin,4TBDMS,isomer #1C[C@@H]1O[C@@H](OC2=CC=C(CN(C(=S)OC#N)[Si](C)(C)C(C)(C)C)C=C2)[C@H](O[Si](C)(C)C(C)(C)C)[C@H](O[Si](C)(C)C(C)(C)C)[C@H]1O[Si](C)(C)C(C)(C)C3599.0Semi standard non polar33892256
Niazidin,4TBDMS,isomer #1C[C@@H]1O[C@@H](OC2=CC=C(CN(C(=S)OC#N)[Si](C)(C)C(C)(C)C)C=C2)[C@H](O[Si](C)(C)C(C)(C)C)[C@H](O[Si](C)(C)C(C)(C)C)[C@H]1O[Si](C)(C)C(C)(C)C3258.6Standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Niazidin GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Niazidin 10V, Positive-QTOFsplash10-066r-0931000000-1e4366aa9cc2a6eae2012021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Niazidin 20V, Positive-QTOFsplash10-0159-0931000000-037063f3b2be8b72509a2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Niazidin 40V, Positive-QTOFsplash10-05fr-4900000000-f9c064b529b5351086ac2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Niazidin 10V, Negative-QTOFsplash10-0pb9-8609000000-10f3b4e8f5ca9ba608b42021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Niazidin 20V, Negative-QTOFsplash10-0a4i-9311000000-c6ea0e6d9701a355b9342021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Niazidin 40V, Negative-QTOFsplash10-05fr-4900000000-15e5ccfa284941425fdd2021-09-24Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB008674
KNApSAcK IDC00057216
Chemspider ID9967101
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound11792427
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1829231
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .