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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 23:54:21 UTC
Update Date2022-03-07 02:55:49 UTC
HMDB IDHMDB0038581
Secondary Accession Numbers
  • HMDB38581
Metabolite Identification
Common NameDihydroxyfumitremorgin C
DescriptionDihydroxyfumitremorgin C belongs to the class of organic compounds known as beta carbolines. Beta carbolines are compounds containing a 9H-pyrido[3,4-b]indole moiety. Based on a literature review a significant number of articles have been published on Dihydroxyfumitremorgin C.
Structure
Data?1563863222
SynonymsNot Available
Chemical FormulaC22H25N3O5
Average Molecular Weight411.451
Monoisotopic Molecular Weight411.179420925
IUPAC Name1,2-dihydroxy-7-methoxy-12-(2-methylprop-1-en-1-yl)-10,13,19-triazapentacyclo[11.7.0.0³,¹¹.0⁴,⁹.0¹⁵,¹⁹]icosa-3(11),4(9),5,7-tetraene-14,20-dione
Traditional Name1,2-dihydroxy-7-methoxy-12-(2-methylprop-1-en-1-yl)-10,13,19-triazapentacyclo[11.7.0.0³,¹¹.0⁴,⁹.0¹⁵,¹⁹]icosa-3(11),4(9),5,7-tetraene-14,20-dione
CAS Registry Number111427-99-7
SMILES
COC1=CC2=C(C=C1)C1=C(N2)C(C=C(C)C)N2C(=O)C3CCCN3C(=O)C2(O)C1O
InChI Identifier
InChI=1S/C22H25N3O5/c1-11(2)9-16-18-17(13-7-6-12(30-3)10-14(13)23-18)19(26)22(29)21(28)24-8-4-5-15(24)20(27)25(16)22/h6-7,9-10,15-16,19,23,26,29H,4-5,8H2,1-3H3
InChI KeyCPHRCQUGNAGVIB-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as beta carbolines. Beta carbolines are compounds containing a 9H-pyrido[3,4-b]indole moiety.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassIndoles and derivatives
Sub ClassPyridoindoles
Direct ParentBeta carbolines
Alternative Parents
Substituents
  • Beta-carboline
  • Alpha-amino acid or derivatives
  • 3-alkylindole
  • Indole
  • Anisole
  • Dioxopiperazine
  • 2,5-dioxopiperazine
  • Alkyl aryl ether
  • N-alkylpiperazine
  • 1,4-diazinane
  • Benzenoid
  • Piperazine
  • Heteroaromatic compound
  • Tertiary carboxylic acid amide
  • Pyrrolidine
  • Pyrrole
  • Carboxamide group
  • Secondary alcohol
  • Lactam
  • Alkanolamine
  • Ether
  • Azacycle
  • Carboxylic acid derivative
  • Hydrocarbon derivative
  • Alcohol
  • Carbonyl group
  • Organic oxide
  • Organopnictogen compound
  • Organic oxygen compound
  • Organic nitrogen compound
  • Organonitrogen compound
  • Organooxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
Role
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point197 - 198 °CNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility2.86 g/LALOGPS
logP1.09ALOGPS
logP1.16ChemAxon
logS-2.2ALOGPS
pKa (Strongest Acidic)10.13ChemAxon
pKa (Strongest Basic)-3.8ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area106.1 ŲChemAxon
Rotatable Bond Count2ChemAxon
Refractivity109.32 m³·mol⁻¹ChemAxon
Polarizability43.83 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+194.47631661259
DarkChem[M-H]-194.79131661259
DeepCCS[M+H]+204.92530932474
DeepCCS[M-H]-202.53630932474
DeepCCS[M-2H]-235.59930932474
DeepCCS[M+Na]+210.98830932474
AllCCS[M+H]+198.132859911
AllCCS[M+H-H2O]+195.632859911
AllCCS[M+NH4]+200.332859911
AllCCS[M+Na]+200.932859911
AllCCS[M-H]-200.132859911
AllCCS[M+Na-2H]-200.432859911
AllCCS[M+HCOO]-200.932859911

Predicted Retention Times

Underivatized

Chromatographic MethodRetention TimeReference
Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. Predicted by Afia on May 17, 2022.5.34 minutes32390414
Predicted by Siyang on May 30, 202211.7023 minutes33406817
Predicted by Siyang using ReTip algorithm on June 8, 20222.16 minutes32390414
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid2312.1 seconds40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid193.4 seconds40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid168.3 seconds40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid164.1 seconds40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid122.8 seconds40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid418.3 seconds40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid460.2 seconds40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)141.8 seconds40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid881.0 seconds40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid434.7 seconds40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid1280.1 seconds40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid296.8 seconds40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid337.4 seconds40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate268.3 seconds40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA198.0 seconds40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water9.0 seconds40023050

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Dihydroxyfumitremorgin CCOC1=CC2=C(C=C1)C1=C(N2)C(C=C(C)C)N2C(=O)C3CCCN3C(=O)C2(O)C1O4858.8Standard polar33892256
Dihydroxyfumitremorgin CCOC1=CC2=C(C=C1)C1=C(N2)C(C=C(C)C)N2C(=O)C3CCCN3C(=O)C2(O)C1O3352.2Standard non polar33892256
Dihydroxyfumitremorgin CCOC1=CC2=C(C=C1)C1=C(N2)C(C=C(C)C)N2C(=O)C3CCCN3C(=O)C2(O)C1O3709.3Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Dihydroxyfumitremorgin C,1TMS,isomer #1COC1=CC=C2C3=C([NH]C2=C1)C(C=C(C)C)N1C(=O)C2CCCN2C(=O)C1(O[Si](C)(C)C)C3O3542.7Semi standard non polar33892256
Dihydroxyfumitremorgin C,1TMS,isomer #2COC1=CC=C2C3=C([NH]C2=C1)C(C=C(C)C)N1C(=O)C2CCCN2C(=O)C1(O)C3O[Si](C)(C)C3568.7Semi standard non polar33892256
Dihydroxyfumitremorgin C,1TMS,isomer #3COC1=CC=C2C3=C(C(C=C(C)C)N4C(=O)C5CCCN5C(=O)C4(O)C3O)N([Si](C)(C)C)C2=C13584.0Semi standard non polar33892256
Dihydroxyfumitremorgin C,2TMS,isomer #1COC1=CC=C2C3=C([NH]C2=C1)C(C=C(C)C)N1C(=O)C2CCCN2C(=O)C1(O[Si](C)(C)C)C3O[Si](C)(C)C3466.6Semi standard non polar33892256
Dihydroxyfumitremorgin C,2TMS,isomer #2COC1=CC=C2C3=C(C(C=C(C)C)N4C(=O)C5CCCN5C(=O)C4(O[Si](C)(C)C)C3O)N([Si](C)(C)C)C2=C13498.5Semi standard non polar33892256
Dihydroxyfumitremorgin C,2TMS,isomer #3COC1=CC=C2C3=C(C(C=C(C)C)N4C(=O)C5CCCN5C(=O)C4(O)C3O[Si](C)(C)C)N([Si](C)(C)C)C2=C13502.8Semi standard non polar33892256
Dihydroxyfumitremorgin C,3TMS,isomer #1COC1=CC=C2C3=C(C(C=C(C)C)N4C(=O)C5CCCN5C(=O)C4(O[Si](C)(C)C)C3O[Si](C)(C)C)N([Si](C)(C)C)C2=C13456.2Semi standard non polar33892256
Dihydroxyfumitremorgin C,3TMS,isomer #1COC1=CC=C2C3=C(C(C=C(C)C)N4C(=O)C5CCCN5C(=O)C4(O[Si](C)(C)C)C3O[Si](C)(C)C)N([Si](C)(C)C)C2=C13479.9Standard non polar33892256
Dihydroxyfumitremorgin C,1TBDMS,isomer #1COC1=CC=C2C3=C([NH]C2=C1)C(C=C(C)C)N1C(=O)C2CCCN2C(=O)C1(O[Si](C)(C)C(C)(C)C)C3O3753.3Semi standard non polar33892256
Dihydroxyfumitremorgin C,1TBDMS,isomer #2COC1=CC=C2C3=C([NH]C2=C1)C(C=C(C)C)N1C(=O)C2CCCN2C(=O)C1(O)C3O[Si](C)(C)C(C)(C)C3770.1Semi standard non polar33892256
Dihydroxyfumitremorgin C,1TBDMS,isomer #3COC1=CC=C2C3=C(C(C=C(C)C)N4C(=O)C5CCCN5C(=O)C4(O)C3O)N([Si](C)(C)C(C)(C)C)C2=C13788.1Semi standard non polar33892256
Dihydroxyfumitremorgin C,2TBDMS,isomer #1COC1=CC=C2C3=C([NH]C2=C1)C(C=C(C)C)N1C(=O)C2CCCN2C(=O)C1(O[Si](C)(C)C(C)(C)C)C3O[Si](C)(C)C(C)(C)C3861.3Semi standard non polar33892256
Dihydroxyfumitremorgin C,2TBDMS,isomer #2COC1=CC=C2C3=C(C(C=C(C)C)N4C(=O)C5CCCN5C(=O)C4(O[Si](C)(C)C(C)(C)C)C3O)N([Si](C)(C)C(C)(C)C)C2=C13872.0Semi standard non polar33892256
Dihydroxyfumitremorgin C,2TBDMS,isomer #3COC1=CC=C2C3=C(C(C=C(C)C)N4C(=O)C5CCCN5C(=O)C4(O)C3O[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)C2=C13869.5Semi standard non polar33892256
Dihydroxyfumitremorgin C,3TBDMS,isomer #1COC1=CC=C2C3=C(C(C=C(C)C)N4C(=O)C5CCCN5C(=O)C4(O[Si](C)(C)C(C)(C)C)C3O[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)C2=C13988.4Semi standard non polar33892256
Dihydroxyfumitremorgin C,3TBDMS,isomer #1COC1=CC=C2C3=C(C(C=C(C)C)N4C(=O)C5CCCN5C(=O)C4(O[Si](C)(C)C(C)(C)C)C3O[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)C2=C14057.6Standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Dihydroxyfumitremorgin C GC-MS (Non-derivatized) - 70eV, Positivesplash10-01pp-6397000000-ded3ba214603ec8af74c2017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Dihydroxyfumitremorgin C GC-MS (2 TMS) - 70eV, Positivesplash10-014i-9113750000-a3c18e0c59d583bf25782017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Dihydroxyfumitremorgin C GC-MS (TBDMS_2_1) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Dihydroxyfumitremorgin C GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Dihydroxyfumitremorgin C GC-MS ("Dihydroxyfumitremorgin C,2TMS,#1" TMS) - 70eV, PositiveNot Available2021-10-14Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dihydroxyfumitremorgin C 10V, Positive-QTOFsplash10-03di-1002900000-c27bb25659a4fd5c4c162015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dihydroxyfumitremorgin C 20V, Positive-QTOFsplash10-0229-9218700000-4636ead3a9da457866272015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dihydroxyfumitremorgin C 40V, Positive-QTOFsplash10-0gi4-9000000000-ebef5b8546ea5251f8ef2015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dihydroxyfumitremorgin C 10V, Positive-QTOFsplash10-03di-1002900000-c27bb25659a4fd5c4c162015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dihydroxyfumitremorgin C 20V, Positive-QTOFsplash10-0229-9218700000-4636ead3a9da457866272015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dihydroxyfumitremorgin C 40V, Positive-QTOFsplash10-0gi4-9000000000-ebef5b8546ea5251f8ef2015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dihydroxyfumitremorgin C 10V, Negative-QTOFsplash10-03di-1001900000-51c7bf58d8042c8b100c2015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dihydroxyfumitremorgin C 20V, Negative-QTOFsplash10-01pc-6094200000-05e8716fcfe7c0e6ca612015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dihydroxyfumitremorgin C 40V, Negative-QTOFsplash10-0fi3-3290000000-e3e70331a8bcaef473fc2015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dihydroxyfumitremorgin C 10V, Negative-QTOFsplash10-03di-1001900000-51c7bf58d8042c8b100c2015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dihydroxyfumitremorgin C 20V, Negative-QTOFsplash10-01pc-6094200000-05e8716fcfe7c0e6ca612015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dihydroxyfumitremorgin C 40V, Negative-QTOFsplash10-0fi3-3290000000-e3e70331a8bcaef473fc2015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dihydroxyfumitremorgin C 10V, Positive-QTOFsplash10-03di-0000900000-61c643be759647fc84582021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dihydroxyfumitremorgin C 20V, Positive-QTOFsplash10-03di-0002900000-5cdd5d57810e7baf998e2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dihydroxyfumitremorgin C 40V, Positive-QTOFsplash10-07or-6935100000-78b490dd16051e4d97942021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dihydroxyfumitremorgin C 10V, Negative-QTOFsplash10-03di-0000900000-4bf01c1025724de694872021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dihydroxyfumitremorgin C 20V, Negative-QTOFsplash10-03e9-0129400000-97d175b95f7d24ce6cff2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dihydroxyfumitremorgin C 40V, Negative-QTOFsplash10-0002-1932100000-4e5c8d582344aa2da5082021-09-24Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Extracellular
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB017971
KNApSAcK IDNot Available
Chemspider ID35014608
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound14019526
PDB IDNot Available
ChEBI ID175299
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .