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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2013-02-26 19:03:34 UTC
Update Date2022-03-07 03:17:36 UTC
HMDB IDHMDB0059775
Secondary Accession Numbers
  • HMDB59775
Metabolite Identification
Common Name3-Hydroxy-3-carboxymethyl-adipic acid
Description3-Hydroxy-3-carboxymethyl-adipic acid belongs to the class of organic compounds known as tricarboxylic acids and derivatives. These are carboxylic acids containing exactly three carboxyl groups. 3-Hydroxy-3-carboxymethyl-adipic acid is an extremely weak basic (essentially neutral) compound (based on its pKa). These are organic compounds containing three carboxylic acid groups (or salt/ester derivatives thereof).
Structure
Data?1563865973
Synonyms
ValueSource
3-Hydroxy-3-carboxymethyl-adipateGenerator
3-(Carboxymethyl)-3-hydroxyhexanedioateGenerator
Chemical FormulaC8H12O7
Average Molecular Weight220.1767
Monoisotopic Molecular Weight220.058302738
IUPAC Name3-(carboxymethyl)-3-hydroxyhexanedioic acid
Traditional Name3-(carboxymethyl)-3-hydroxyhexanedioic acid
CAS Registry NumberNot Available
SMILES
OC(=O)CCC(O)(CC(O)=O)CC(O)=O
InChI Identifier
InChI=1S/C8H12O7/c9-5(10)1-2-8(15,3-6(11)12)4-7(13)14/h15H,1-4H2,(H,9,10)(H,11,12)(H,13,14)
InChI KeyGLPOQLKJZBFEMA-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as tricarboxylic acids and derivatives. These are carboxylic acids containing exactly three carboxyl groups.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassCarboxylic acids and derivatives
Sub ClassTricarboxylic acids and derivatives
Direct ParentTricarboxylic acids and derivatives
Alternative Parents
Substituents
  • Tricarboxylic acid or derivatives
  • Tertiary alcohol
  • Carboxylic acid
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Carbonyl group
  • Alcohol
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility146 g/LALOGPS
logP-1.5ALOGPS
logP-1.1ChemAxon
logS-0.18ALOGPS
pKa (Strongest Acidic)3.34ChemAxon
pKa (Strongest Basic)-3.1ChemAxon
Physiological Charge-3ChemAxon
Hydrogen Acceptor Count7ChemAxon
Hydrogen Donor Count4ChemAxon
Polar Surface Area132.13 ŲChemAxon
Rotatable Bond Count7ChemAxon
Refractivity44.93 m³·mol⁻¹ChemAxon
Polarizability19.55 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+150.90531661259
DarkChem[M-H]-145.25531661259
DeepCCS[M+H]+138.39530932474
DeepCCS[M-H]-135.48930932474
DeepCCS[M-2H]-172.14930932474
DeepCCS[M+Na]+147.68830932474
AllCCS[M+H]+147.932859911
AllCCS[M+H-H2O]+144.432859911
AllCCS[M+NH4]+151.132859911
AllCCS[M+Na]+152.132859911
AllCCS[M-H]-142.932859911
AllCCS[M+Na-2H]-143.732859911
AllCCS[M+HCOO]-144.732859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
3-Hydroxy-3-carboxymethyl-adipic acidOC(=O)CCC(O)(CC(O)=O)CC(O)=O3162.3Standard polar33892256
3-Hydroxy-3-carboxymethyl-adipic acidOC(=O)CCC(O)(CC(O)=O)CC(O)=O1380.1Standard non polar33892256
3-Hydroxy-3-carboxymethyl-adipic acidOC(=O)CCC(O)(CC(O)=O)CC(O)=O1970.4Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
3-Hydroxy-3-carboxymethyl-adipic acid,1TMS,isomer #1C[Si](C)(C)OC(=O)CCC(O)(CC(=O)O)CC(=O)O1926.4Semi standard non polar33892256
3-Hydroxy-3-carboxymethyl-adipic acid,1TMS,isomer #2C[Si](C)(C)OC(CCC(=O)O)(CC(=O)O)CC(=O)O1953.3Semi standard non polar33892256
3-Hydroxy-3-carboxymethyl-adipic acid,1TMS,isomer #3C[Si](C)(C)OC(=O)CC(O)(CCC(=O)O)CC(=O)O1906.7Semi standard non polar33892256
3-Hydroxy-3-carboxymethyl-adipic acid,2TMS,isomer #1C[Si](C)(C)OC(=O)CCC(CC(=O)O)(CC(=O)O)O[Si](C)(C)C1990.8Semi standard non polar33892256
3-Hydroxy-3-carboxymethyl-adipic acid,2TMS,isomer #2C[Si](C)(C)OC(=O)CCC(O)(CC(=O)O)CC(=O)O[Si](C)(C)C2007.8Semi standard non polar33892256
3-Hydroxy-3-carboxymethyl-adipic acid,2TMS,isomer #3C[Si](C)(C)OC(=O)CC(CCC(=O)O)(CC(=O)O)O[Si](C)(C)C1986.5Semi standard non polar33892256
3-Hydroxy-3-carboxymethyl-adipic acid,2TMS,isomer #4C[Si](C)(C)OC(=O)CC(O)(CCC(=O)O)CC(=O)O[Si](C)(C)C1996.6Semi standard non polar33892256
3-Hydroxy-3-carboxymethyl-adipic acid,3TMS,isomer #1C[Si](C)(C)OC(=O)CCC(CC(=O)O)(CC(=O)O[Si](C)(C)C)O[Si](C)(C)C2026.0Semi standard non polar33892256
3-Hydroxy-3-carboxymethyl-adipic acid,3TMS,isomer #2C[Si](C)(C)OC(=O)CCC(O)(CC(=O)O[Si](C)(C)C)CC(=O)O[Si](C)(C)C2023.1Semi standard non polar33892256
3-Hydroxy-3-carboxymethyl-adipic acid,3TMS,isomer #3C[Si](C)(C)OC(=O)CC(CCC(=O)O)(CC(=O)O[Si](C)(C)C)O[Si](C)(C)C2011.1Semi standard non polar33892256
3-Hydroxy-3-carboxymethyl-adipic acid,4TMS,isomer #1C[Si](C)(C)OC(=O)CCC(CC(=O)O[Si](C)(C)C)(CC(=O)O[Si](C)(C)C)O[Si](C)(C)C2054.2Semi standard non polar33892256
3-Hydroxy-3-carboxymethyl-adipic acid,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)CCC(O)(CC(=O)O)CC(=O)O2227.1Semi standard non polar33892256
3-Hydroxy-3-carboxymethyl-adipic acid,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(CCC(=O)O)(CC(=O)O)CC(=O)O2200.3Semi standard non polar33892256
3-Hydroxy-3-carboxymethyl-adipic acid,1TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC(=O)CC(O)(CCC(=O)O)CC(=O)O2210.9Semi standard non polar33892256
3-Hydroxy-3-carboxymethyl-adipic acid,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)CCC(CC(=O)O)(CC(=O)O)O[Si](C)(C)C(C)(C)C2470.6Semi standard non polar33892256
3-Hydroxy-3-carboxymethyl-adipic acid,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(=O)CCC(O)(CC(=O)O)CC(=O)O[Si](C)(C)C(C)(C)C2516.3Semi standard non polar33892256
3-Hydroxy-3-carboxymethyl-adipic acid,2TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC(=O)CC(CCC(=O)O)(CC(=O)O)O[Si](C)(C)C(C)(C)C2460.0Semi standard non polar33892256
3-Hydroxy-3-carboxymethyl-adipic acid,2TBDMS,isomer #4CC(C)(C)[Si](C)(C)OC(=O)CC(O)(CCC(=O)O)CC(=O)O[Si](C)(C)C(C)(C)C2514.8Semi standard non polar33892256
3-Hydroxy-3-carboxymethyl-adipic acid,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)CCC(CC(=O)O)(CC(=O)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2719.2Semi standard non polar33892256
3-Hydroxy-3-carboxymethyl-adipic acid,3TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(=O)CCC(O)(CC(=O)O[Si](C)(C)C(C)(C)C)CC(=O)O[Si](C)(C)C(C)(C)C2712.5Semi standard non polar33892256
3-Hydroxy-3-carboxymethyl-adipic acid,3TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC(=O)CC(CCC(=O)O)(CC(=O)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2711.1Semi standard non polar33892256
3-Hydroxy-3-carboxymethyl-adipic acid,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)CCC(CC(=O)O[Si](C)(C)C(C)(C)C)(CC(=O)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2902.3Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 3-Hydroxy-3-carboxymethyl-adipic acid GC-MS (Non-derivatized) - 70eV, Positivesplash10-0002-3910000000-0ca9f0c7cc26307bd2ee2017-09-20Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 3-Hydroxy-3-carboxymethyl-adipic acid GC-MS (4 TMS) - 70eV, Positivesplash10-002f-8138900000-2bd1286720ccac7725fe2017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 3-Hydroxy-3-carboxymethyl-adipic acid GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Hydroxy-3-carboxymethyl-adipic acid 10V, Positive-QTOFsplash10-0udr-0980000000-9905f4a9eb807ed313362017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Hydroxy-3-carboxymethyl-adipic acid 20V, Positive-QTOFsplash10-0a4r-1920000000-87699633c59c541398c22017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Hydroxy-3-carboxymethyl-adipic acid 40V, Positive-QTOFsplash10-0aou-3900000000-5d815b6569a0e1b9ff9e2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Hydroxy-3-carboxymethyl-adipic acid 10V, Negative-QTOFsplash10-0lfr-0980000000-78da13ddb3e7de72428a2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Hydroxy-3-carboxymethyl-adipic acid 20V, Negative-QTOFsplash10-0pb9-1960000000-99e8f63ad7ad500223ec2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Hydroxy-3-carboxymethyl-adipic acid 40V, Negative-QTOFsplash10-0a4i-4900000000-8a5af0b5a72c5b15a3f52017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Hydroxy-3-carboxymethyl-adipic acid 10V, Negative-QTOFsplash10-016r-0890000000-bf46a826ffa4dc5497462021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Hydroxy-3-carboxymethyl-adipic acid 20V, Negative-QTOFsplash10-057i-0900000000-07ddf73122efd32923c02021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Hydroxy-3-carboxymethyl-adipic acid 40V, Negative-QTOFsplash10-0a4i-9500000000-4c4a86fbf2cd8d26cde12021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Hydroxy-3-carboxymethyl-adipic acid 10V, Positive-QTOFsplash10-0uk9-0790000000-0dab0b0a41f30cbe1bd62021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Hydroxy-3-carboxymethyl-adipic acid 20V, Positive-QTOFsplash10-0a4i-6920000000-aa4ce402f45236b0172c2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Hydroxy-3-carboxymethyl-adipic acid 40V, Positive-QTOFsplash10-0lz9-3900000000-72872b5fbedfb854d3e52021-09-22Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Urine
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
UrineDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound88181051
PDB IDNot Available
ChEBI ID89858
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available