Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2013-05-17 01:20:47 UTC
Update Date2022-03-07 03:17:44 UTC
HMDB IDHMDB0060437
Secondary Accession Numbers
  • HMDB60437
Metabolite Identification
Common NameAndrostan-3alpha,17beta-diol
DescriptionAndrostan-3alpha,17beta-diol, also known as 5α-androstan-3α,17β-diol or hombreol, belongs to the class of organic compounds known as androgens and derivatives. These are 3-hydroxylated C19 steroid hormones. They are known to favor the development of masculine characteristics. They also show profound effects on scalp and body hair in humans. Based on a literature review a significant number of articles have been published on Androstan-3alpha,17beta-diol.
Structure
Data?1563866060
Synonyms
ValueSource
5alpha-Androstan-3alpha,17beta-diolKegg
5a-Androstan-3a,17b-diolGenerator
5Α-androstan-3α,17β-diolGenerator
Androstan-3a,17b-diolGenerator
Androstan-3α,17β-diolGenerator
(3alpha,5alpha,17beta)-Androstane-3,17-diolHMDB
3alpha,17beta-Dihydroxy-5alpha-androstaneHMDB
HombreolHMDB
(3a,5a,17b)-Androstane-3,17-diolHMDB
(3Α,5α,17β)-androstane-3,17-diolHMDB
3a,17b-Dihydroxy-5a-androstaneHMDB
3Α,17β-dihydroxy-5α-androstaneHMDB
Chemical FormulaC19H32O2
Average Molecular Weight292.4562
Monoisotopic Molecular Weight292.240230268
IUPAC Name(5R,14S)-2,15-dimethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecane-5,14-diol
Traditional Name(5R,14S)-2,15-dimethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecane-5,14-diol
CAS Registry NumberNot Available
SMILES
CC12CCC3C(CCC4C[C@H](O)CCC34C)C1CC[C@@H]2O
InChI Identifier
InChI=1S/C19H32O2/c1-18-9-7-13(20)11-12(18)3-4-14-15-5-6-17(21)19(15,2)10-8-16(14)18/h12-17,20-21H,3-11H2,1-2H3/t12?,13-,14?,15?,16?,17+,18?,19?/m1/s1
InChI KeyCBMYJHIOYJEBSB-RLSXWVIDSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as androgens and derivatives. These are 3-hydroxylated C19 steroid hormones. They are known to favor the development of masculine characteristics. They also show profound effects on scalp and body hair in humans.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassSteroids and steroid derivatives
Sub ClassAndrostane steroids
Direct ParentAndrogens and derivatives
Alternative Parents
Substituents
  • Androgen-skeleton
  • 17-hydroxysteroid
  • 3-alpha-hydroxysteroid
  • Hydroxysteroid
  • 3-hydroxysteroid
  • Cyclic alcohol
  • Secondary alcohol
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Organooxygen compound
  • Alcohol
  • Aliphatic homopolycyclic compound
Molecular FrameworkAliphatic homopolycyclic compounds
External Descriptors
  • C19 steroids (androgens) and derivatives (C03852 )
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.019 g/LALOGPS
logP3.56ALOGPS
logP3.2ChemAxon
logS-4.2ALOGPS
pKa (Strongest Acidic)18.3ChemAxon
pKa (Strongest Basic)-0.76ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area40.46 ŲChemAxon
Rotatable Bond Count0ChemAxon
Refractivity84.63 m³·mol⁻¹ChemAxon
Polarizability35.44 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+167.5931661259
DarkChem[M-H]-165.38831661259
DeepCCS[M-2H]-206.9930932474
DeepCCS[M+Na]+182.21830932474
AllCCS[M+H]+177.832859911
AllCCS[M+H-H2O]+174.832859911
AllCCS[M+NH4]+180.632859911
AllCCS[M+Na]+181.532859911
AllCCS[M-H]-179.132859911
AllCCS[M+Na-2H]-179.432859911
AllCCS[M+HCOO]-179.932859911

Predicted Retention Times

Underivatized

Chromatographic MethodRetention TimeReference
Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter)). Predicted by Afia on May 17, 2022.6.0 minutes32390414
Predicted by Siyang on May 30, 202214.4283 minutes33406817
Predicted by Siyang using ReTip algorithm on June 8, 20222.58 minutes32390414
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid2466.1 seconds40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid317.5 seconds40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid195.5 seconds40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid175.5 seconds40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid472.0 seconds40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid623.2 seconds40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid599.9 seconds40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)116.9 seconds40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid1114.8 seconds40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid449.0 seconds40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid1497.8 seconds40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid355.0 seconds40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid415.9 seconds40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate312.0 seconds40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA375.9 seconds40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water43.0 seconds40023050

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Androstan-3alpha,17beta-diolCC12CCC3C(CCC4C[C@H](O)CCC34C)C1CC[C@@H]2O2344.7Standard polar33892256
Androstan-3alpha,17beta-diolCC12CCC3C(CCC4C[C@H](O)CCC34C)C1CC[C@@H]2O2442.0Standard non polar33892256
Androstan-3alpha,17beta-diolCC12CCC3C(CCC4C[C@H](O)CCC34C)C1CC[C@@H]2O2635.4Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Androstan-3alpha,17beta-diol,1TMS,isomer #1CC12CC[C@@H](O[Si](C)(C)C)CC1CCC1C2CCC2(C)C1CC[C@@H]2O2593.1Semi standard non polar33892256
Androstan-3alpha,17beta-diol,1TMS,isomer #2CC12CC[C@@H](O)CC1CCC1C2CCC2(C)C1CC[C@@H]2O[Si](C)(C)C2591.0Semi standard non polar33892256
Androstan-3alpha,17beta-diol,2TMS,isomer #1CC12CC[C@@H](O[Si](C)(C)C)CC1CCC1C2CCC2(C)C1CC[C@@H]2O[Si](C)(C)C2586.2Semi standard non polar33892256
Androstan-3alpha,17beta-diol,1TBDMS,isomer #1CC12CC[C@@H](O[Si](C)(C)C(C)(C)C)CC1CCC1C2CCC2(C)C1CC[C@@H]2O2844.9Semi standard non polar33892256
Androstan-3alpha,17beta-diol,1TBDMS,isomer #2CC12CC[C@@H](O)CC1CCC1C2CCC2(C)C1CC[C@@H]2O[Si](C)(C)C(C)(C)C2864.8Semi standard non polar33892256
Androstan-3alpha,17beta-diol,2TBDMS,isomer #1CC12CC[C@@H](O[Si](C)(C)C(C)(C)C)CC1CCC1C2CCC2(C)C1CC[C@@H]2O[Si](C)(C)C(C)(C)C3107.0Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Androstan-3alpha,17beta-diol GC-MS (Non-derivatized) - 70eV, Positivesplash10-03gi-0290000000-2102975bd891dd5871512017-09-20Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Androstan-3alpha,17beta-diol GC-MS (2 TMS) - 70eV, Positivesplash10-05fr-2227900000-87cd967afbbb2453594f2017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Androstan-3alpha,17beta-diol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Androstan-3alpha,17beta-diol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Androstan-3alpha,17beta-diol 10V, Positive-QTOFsplash10-004l-0090000000-f273d079c7767f673ac42017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Androstan-3alpha,17beta-diol 20V, Positive-QTOFsplash10-056r-0290000000-241c15d984d5502957c22017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Androstan-3alpha,17beta-diol 40V, Positive-QTOFsplash10-00mk-2790000000-1cfe15a3e20555af8c992017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Androstan-3alpha,17beta-diol 10V, Negative-QTOFsplash10-0006-0090000000-7976b987ec10e61bdb4c2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Androstan-3alpha,17beta-diol 20V, Negative-QTOFsplash10-006x-0090000000-72251dd83cca96a12d442017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Androstan-3alpha,17beta-diol 40V, Negative-QTOFsplash10-01r5-0190000000-1da2626be2ffb7cb78132017-10-06Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane (predicted from logP)
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB022114
KNApSAcK IDC00060540
Chemspider ID15039
KEGG Compound IDC03852
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia Link3%CE%B1-Androstanediol
METLIN ID5538
PubChem Compound440143
PDB IDNot Available
ChEBI ID36713
Food Biomarker OntologyNot Available
VMH IDCE2209
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Magrane M: UniProt Knowledgebase: a hub of integrated protein data. Database (Oxford). 2011 Mar 29;2011:bar009. doi: 10.1093/database/bar009. Print 2011. [PubMed:21447597 ]
  2. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  3. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  4. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  5. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.

Enzymes

General function:
Involved in oxidoreductase activity
Specific function:
Catalyzes the transformation of the potent androgen dihydrotestosterone (DHT) into the less active form, 5-alpha-androstan-3-alpha,17-beta-diol (3-alpha-diol). Also has some 20-alpha-hydroxysteroid dehydrogenase activity. The biotransformation of the pesticide chlordecone (kepone) to its corresponding alcohol leads to increased biliary excretion of the pesticide and concomitant reduction of its neurotoxicity since bile is the major excretory route.
Gene Name:
AKR1C4
Uniprot ID:
P17516
Molecular weight:
37094.57
Reactions
Dihydrotestosterone + NADPH + Hydrogen Ion → Androstan-3alpha,17beta-diol + NADPdetails