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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-01 03:28:34 UTC
Update Date2021-09-26 22:48:59 UTC
HMDB IDHMDB0242532
Secondary Accession NumbersNone
Metabolite Identification
Common Name(2R,6S)-2,6-Diaminoheptanedioic acid
Descriptionmeso-diaminopimelate, also known as diaminopimelic acid or Dpm, belongs to the class of organic compounds known as alpha amino acids. These are amino acids in which the amino group is attached to the carbon atom immediately adjacent to the carboxylate group (alpha carbon). meso-diaminopimelate has been detected, but not quantified in, several different foods, such as loganberries (Rubus loganobaccus), chervils (Anthriscus cerefolium), chanterelles (Cantharellus cibarius), red raspberries (Rubus idaeus), and wheats (Triticum). This could make meso-diaminopimelate a potential biomarker for the consumption of these foods. meso-diaminopimelate is a primary metabolite. Primary metabolites are metabolically or physiologically essential metabolites. They are directly involved in an organism’s growth, development or reproduction. Based on a literature review a significant number of articles have been published on meso-diaminopimelate. This compound has been identified in human blood as reported by (PMID: 31557052 ). (2r,6s)-2,6-diaminoheptanedioic acid is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically (2R,6S)-2,6-Diaminoheptanedioic acid is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
alpha,epsilon-Diaminopimelic acidChEBI
Diaminopimelic acidChEBI
DpmChEBI
a,epsilon-DiaminopimelateGenerator
a,epsilon-Diaminopimelic acidGenerator
alpha,epsilon-DiaminopimelateGenerator
Α,epsilon-diaminopimelateGenerator
Α,epsilon-diaminopimelic acidGenerator
DiaminopimelateGenerator
Meso-diaminopimelic acidGenerator
2,6 Diaminopimelic acidMeSH, HMDB
Acid, 2,6-diaminopimelicMeSH, HMDB
Acid, diaminopimelicMeSH, HMDB
(2R,6S)-2,6-DiaminoheptanedioateGenerator
Chemical FormulaC7H14N2O4
Average Molecular Weight190.199
Monoisotopic Molecular Weight190.095356939
IUPAC Name2,6-diaminoheptanedioic acid
Traditional NameDpm
CAS Registry NumberNot Available
SMILES
NC(CCCC(N)C(O)=O)C(O)=O
InChI Identifier
InChI=1S/C7H14N2O4/c8-4(6(10)11)2-1-3-5(9)7(12)13/h4-5H,1-3,8-9H2,(H,10,11)(H,12,13)
InChI KeyGMKMEZVLHJARHF-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as alpha amino acids. These are amino acids in which the amino group is attached to the carbon atom immediately adjacent to the carboxylate group (alpha carbon).
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassCarboxylic acids and derivatives
Sub ClassAmino acids, peptides, and analogues
Direct ParentAlpha amino acids
Alternative Parents
Substituents
  • Alpha-amino acid
  • Medium-chain fatty acid
  • Amino fatty acid
  • Dicarboxylic acid or derivatives
  • Fatty acid
  • Fatty acyl
  • Amino acid
  • Carboxylic acid
  • Organic oxide
  • Primary amine
  • Organooxygen compound
  • Organonitrogen compound
  • Primary aliphatic amine
  • Organopnictogen compound
  • Carbonyl group
  • Organic oxygen compound
  • Amine
  • Organic nitrogen compound
  • Hydrocarbon derivative
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP-4.1ALOGPS
logP-5.5ChemAxon
logS-1.1ALOGPS
pKa (Strongest Acidic)1.85ChemAxon
pKa (Strongest Basic)9.83ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count4ChemAxon
Polar Surface Area126.64 ŲChemAxon
Rotatable Bond Count6ChemAxon
Refractivity43.64 m³·mol⁻¹ChemAxon
Polarizability18.89 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+137.15530932474
DeepCCS[M-H]-133.32430932474
DeepCCS[M-2H]-170.7230932474
DeepCCS[M+Na]+146.32230932474
AllCCS[M+H]+141.932859911
AllCCS[M+H-H2O]+138.232859911
AllCCS[M+NH4]+145.432859911
AllCCS[M+Na]+146.432859911
AllCCS[M-H]-136.632859911
AllCCS[M+Na-2H]-137.732859911
AllCCS[M+HCOO]-139.032859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
(2R,6S)-2,6-Diaminoheptanedioic acidNC(CCCC(N)C(O)=O)C(O)=O2576.1Standard polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acidNC(CCCC(N)C(O)=O)C(O)=O1591.1Standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acidNC(CCCC(N)C(O)=O)C(O)=O2214.2Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
(2R,6S)-2,6-Diaminoheptanedioic acid,3TMS,isomer #1C[Si](C)(C)NC(CCCC(N)C(=O)O[Si](C)(C)C)C(=O)O[Si](C)(C)C1920.1Semi standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,3TMS,isomer #1C[Si](C)(C)NC(CCCC(N)C(=O)O[Si](C)(C)C)C(=O)O[Si](C)(C)C2038.1Standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,3TMS,isomer #1C[Si](C)(C)NC(CCCC(N)C(=O)O[Si](C)(C)C)C(=O)O[Si](C)(C)C2704.4Standard polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,3TMS,isomer #2C[Si](C)(C)NC(CCCC(N[Si](C)(C)C)C(=O)O[Si](C)(C)C)C(=O)O1994.4Semi standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,3TMS,isomer #2C[Si](C)(C)NC(CCCC(N[Si](C)(C)C)C(=O)O[Si](C)(C)C)C(=O)O2028.1Standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,3TMS,isomer #2C[Si](C)(C)NC(CCCC(N[Si](C)(C)C)C(=O)O[Si](C)(C)C)C(=O)O2523.8Standard polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,3TMS,isomer #3C[Si](C)(C)OC(=O)C(CCCC(N)C(=O)O)N([Si](C)(C)C)[Si](C)(C)C2110.6Semi standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,3TMS,isomer #3C[Si](C)(C)OC(=O)C(CCCC(N)C(=O)O)N([Si](C)(C)C)[Si](C)(C)C2034.4Standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,3TMS,isomer #3C[Si](C)(C)OC(=O)C(CCCC(N)C(=O)O)N([Si](C)(C)C)[Si](C)(C)C2978.8Standard polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,3TMS,isomer #4C[Si](C)(C)OC(=O)C(N)CCCC(C(=O)O)N([Si](C)(C)C)[Si](C)(C)C2107.9Semi standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,3TMS,isomer #4C[Si](C)(C)OC(=O)C(N)CCCC(C(=O)O)N([Si](C)(C)C)[Si](C)(C)C2086.3Standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,3TMS,isomer #4C[Si](C)(C)OC(=O)C(N)CCCC(C(=O)O)N([Si](C)(C)C)[Si](C)(C)C2819.5Standard polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,3TMS,isomer #5C[Si](C)(C)NC(CCCC(C(=O)O)N([Si](C)(C)C)[Si](C)(C)C)C(=O)O2190.6Semi standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,3TMS,isomer #5C[Si](C)(C)NC(CCCC(C(=O)O)N([Si](C)(C)C)[Si](C)(C)C)C(=O)O2068.0Standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,3TMS,isomer #5C[Si](C)(C)NC(CCCC(C(=O)O)N([Si](C)(C)C)[Si](C)(C)C)C(=O)O2689.5Standard polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,4TMS,isomer #1C[Si](C)(C)NC(CCCC(N[Si](C)(C)C)C(=O)O[Si](C)(C)C)C(=O)O[Si](C)(C)C1984.0Semi standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,4TMS,isomer #1C[Si](C)(C)NC(CCCC(N[Si](C)(C)C)C(=O)O[Si](C)(C)C)C(=O)O[Si](C)(C)C2089.6Standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,4TMS,isomer #1C[Si](C)(C)NC(CCCC(N[Si](C)(C)C)C(=O)O[Si](C)(C)C)C(=O)O[Si](C)(C)C2201.0Standard polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,4TMS,isomer #2C[Si](C)(C)OC(=O)C(N)CCCC(C(=O)O[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C2101.5Semi standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,4TMS,isomer #2C[Si](C)(C)OC(=O)C(N)CCCC(C(=O)O[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C2145.1Standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,4TMS,isomer #2C[Si](C)(C)OC(=O)C(N)CCCC(C(=O)O[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C2628.4Standard polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,4TMS,isomer #3C[Si](C)(C)NC(CCCC(C(=O)O)N([Si](C)(C)C)[Si](C)(C)C)C(=O)O[Si](C)(C)C2163.7Semi standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,4TMS,isomer #3C[Si](C)(C)NC(CCCC(C(=O)O)N([Si](C)(C)C)[Si](C)(C)C)C(=O)O[Si](C)(C)C2160.7Standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,4TMS,isomer #3C[Si](C)(C)NC(CCCC(C(=O)O)N([Si](C)(C)C)[Si](C)(C)C)C(=O)O[Si](C)(C)C2381.0Standard polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,4TMS,isomer #4C[Si](C)(C)NC(CCCC(C(=O)O[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C)C(=O)O2168.0Semi standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,4TMS,isomer #4C[Si](C)(C)NC(CCCC(C(=O)O[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C)C(=O)O2130.3Standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,4TMS,isomer #4C[Si](C)(C)NC(CCCC(C(=O)O[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C)C(=O)O2421.3Standard polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,4TMS,isomer #5C[Si](C)(C)N(C(CCCC(C(=O)O)N([Si](C)(C)C)[Si](C)(C)C)C(=O)O)[Si](C)(C)C2333.7Semi standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,4TMS,isomer #5C[Si](C)(C)N(C(CCCC(C(=O)O)N([Si](C)(C)C)[Si](C)(C)C)C(=O)O)[Si](C)(C)C2212.7Standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,4TMS,isomer #5C[Si](C)(C)N(C(CCCC(C(=O)O)N([Si](C)(C)C)[Si](C)(C)C)C(=O)O)[Si](C)(C)C2540.3Standard polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,5TMS,isomer #1C[Si](C)(C)NC(CCCC(C(=O)O[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C)C(=O)O[Si](C)(C)C2147.4Semi standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,5TMS,isomer #1C[Si](C)(C)NC(CCCC(C(=O)O[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C)C(=O)O[Si](C)(C)C2187.8Standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,5TMS,isomer #1C[Si](C)(C)NC(CCCC(C(=O)O[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C)C(=O)O[Si](C)(C)C2154.8Standard polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,5TMS,isomer #2C[Si](C)(C)OC(=O)C(CCCC(C(=O)O)N([Si](C)(C)C)[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C2346.1Semi standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,5TMS,isomer #2C[Si](C)(C)OC(=O)C(CCCC(C(=O)O)N([Si](C)(C)C)[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C2262.9Standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,5TMS,isomer #2C[Si](C)(C)OC(=O)C(CCCC(C(=O)O)N([Si](C)(C)C)[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C2308.2Standard polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,6TMS,isomer #1C[Si](C)(C)OC(=O)C(CCCC(C(=O)O[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C2427.6Semi standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,6TMS,isomer #1C[Si](C)(C)OC(=O)C(CCCC(C(=O)O[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C2291.5Standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,6TMS,isomer #1C[Si](C)(C)OC(=O)C(CCCC(C(=O)O[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C2147.1Standard polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC(CCCC(N)C(=O)O[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C2575.8Semi standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC(CCCC(N)C(=O)O[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C2611.2Standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC(CCCC(N)C(=O)O[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C2861.7Standard polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,3TBDMS,isomer #2CC(C)(C)[Si](C)(C)NC(CCCC(N[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C)C(=O)O2663.4Semi standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,3TBDMS,isomer #2CC(C)(C)[Si](C)(C)NC(CCCC(N[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C)C(=O)O2584.1Standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,3TBDMS,isomer #2CC(C)(C)[Si](C)(C)NC(CCCC(N[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C)C(=O)O2744.1Standard polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,3TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC(=O)C(CCCC(N)C(=O)O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2756.8Semi standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,3TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC(=O)C(CCCC(N)C(=O)O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2636.5Standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,3TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC(=O)C(CCCC(N)C(=O)O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3010.3Standard polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,3TBDMS,isomer #4CC(C)(C)[Si](C)(C)OC(=O)C(N)CCCC(C(=O)O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2741.4Semi standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,3TBDMS,isomer #4CC(C)(C)[Si](C)(C)OC(=O)C(N)CCCC(C(=O)O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2631.2Standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,3TBDMS,isomer #4CC(C)(C)[Si](C)(C)OC(=O)C(N)CCCC(C(=O)O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2919.0Standard polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,3TBDMS,isomer #5CC(C)(C)[Si](C)(C)NC(CCCC(C(=O)O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C(=O)O2845.0Semi standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,3TBDMS,isomer #5CC(C)(C)[Si](C)(C)NC(CCCC(C(=O)O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C(=O)O2610.1Standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,3TBDMS,isomer #5CC(C)(C)[Si](C)(C)NC(CCCC(C(=O)O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C(=O)O2845.7Standard polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC(CCCC(N[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C2824.0Semi standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC(CCCC(N[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C2787.8Standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC(CCCC(N[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C2663.6Standard polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,4TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(=O)C(N)CCCC(C(=O)O[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2987.1Semi standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,4TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(=O)C(N)CCCC(C(=O)O[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2857.0Standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,4TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(=O)C(N)CCCC(C(=O)O[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2871.3Standard polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,4TBDMS,isomer #3CC(C)(C)[Si](C)(C)NC(CCCC(C(=O)O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C3018.0Semi standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,4TBDMS,isomer #3CC(C)(C)[Si](C)(C)NC(CCCC(C(=O)O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C2830.4Standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,4TBDMS,isomer #3CC(C)(C)[Si](C)(C)NC(CCCC(C(=O)O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C2737.0Standard polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,4TBDMS,isomer #4CC(C)(C)[Si](C)(C)NC(CCCC(C(=O)O[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C(=O)O3048.7Semi standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,4TBDMS,isomer #4CC(C)(C)[Si](C)(C)NC(CCCC(C(=O)O[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C(=O)O2836.5Standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,4TBDMS,isomer #4CC(C)(C)[Si](C)(C)NC(CCCC(C(=O)O[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C(=O)O2764.1Standard polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,4TBDMS,isomer #5CC(C)(C)[Si](C)(C)N(C(CCCC(C(=O)O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C(=O)O)[Si](C)(C)C(C)(C)C3156.1Semi standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,4TBDMS,isomer #5CC(C)(C)[Si](C)(C)N(C(CCCC(C(=O)O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C(=O)O)[Si](C)(C)C(C)(C)C2860.0Standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,4TBDMS,isomer #5CC(C)(C)[Si](C)(C)N(C(CCCC(C(=O)O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C(=O)O)[Si](C)(C)C(C)(C)C2825.2Standard polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,5TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC(CCCC(C(=O)O[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C3234.7Semi standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,5TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC(CCCC(C(=O)O[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C3023.6Standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,5TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC(CCCC(C(=O)O[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C2698.1Standard polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,5TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(=O)C(CCCC(C(=O)O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3375.2Semi standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,5TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(=O)C(CCCC(C(=O)O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3068.6Standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,5TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(=O)C(CCCC(C(=O)O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2748.1Standard polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,6TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)C(CCCC(C(=O)O[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3665.9Semi standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,6TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)C(CCCC(C(=O)O[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3275.4Standard non polar33892256
(2R,6S)-2,6-Diaminoheptanedioic acid,6TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)C(CCCC(C(=O)O[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2762.5Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid GC-MS (Non-derivatized) - 70eV, Positivesplash10-006w-9500000000-584788aad00700415d8d2021-09-23Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid GC-MS (TMS_1_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid GC-MS (TMS_1_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid GC-MS (TMS_2_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid GC-MS (TMS_2_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid GC-MS (TMS_2_3) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid GC-MS (TMS_2_4) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid GC-MS (TMS_2_5) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid GC-MS (TBDMS_1_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid GC-MS (TBDMS_1_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid GC-MS (TBDMS_2_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid GC-MS (TBDMS_2_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid GC-MS (TBDMS_2_3) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid GC-MS (TBDMS_2_4) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid GC-MS (TBDMS_2_5) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Experimental LC-MS/MSLC-MS/MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid 30V, Positive-QTOFsplash10-002f-0900000000-3fded8f211199c02c4082021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid 35V, Positive-QTOFsplash10-0059-6900000000-8add2eac4d1f180513ba2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid 35V, Negative-QTOFsplash10-0006-0900000000-486040b7ae490d2625092021-09-20HMDB team, MONAView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid 10V, Positive-QTOFsplash10-006w-1900000000-b0e4598bfac1f10420282015-05-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid 20V, Positive-QTOFsplash10-0002-5900000000-3cf670544958e8c5e2162015-05-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid 40V, Positive-QTOFsplash10-006t-9200000000-cb92e651126ece5c413e2015-05-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid 10V, Positive-QTOFsplash10-006w-1900000000-b0e4598bfac1f10420282015-05-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid 20V, Positive-QTOFsplash10-0002-5900000000-3cf670544958e8c5e2162015-05-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid 40V, Positive-QTOFsplash10-006t-9200000000-cb92e651126ece5c413e2015-05-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid 10V, Positive-QTOFsplash10-006w-1900000000-b0e4598bfac1f10420282015-05-27Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid 20V, Positive-QTOFsplash10-0002-5900000000-3cf670544958e8c5e2162015-05-27Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid 40V, Positive-QTOFsplash10-006t-9200000000-cb92e651126ece5c413e2015-05-27Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid 10V, Negative-QTOFsplash10-000i-0900000000-c81ad78d33d56b184c0a2015-05-27Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid 20V, Negative-QTOFsplash10-0079-1900000000-be9446a41a29ccfe478c2015-05-27Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid 40V, Negative-QTOFsplash10-00di-9500000000-737f0f27e617ae2e898e2015-05-27Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid 10V, Negative-QTOFsplash10-000i-0900000000-c81ad78d33d56b184c0a2015-05-27Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid 20V, Negative-QTOFsplash10-0079-1900000000-be9446a41a29ccfe478c2015-05-27Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid 40V, Negative-QTOFsplash10-00di-9500000000-737f0f27e617ae2e898e2015-05-27Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid 10V, Negative-QTOFsplash10-000i-0900000000-c81ad78d33d56b184c0a2015-05-27Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid 20V, Negative-QTOFsplash10-0079-1900000000-be9446a41a29ccfe478c2015-05-27Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid 40V, Negative-QTOFsplash10-00di-9500000000-737f0f27e617ae2e898e2015-05-27Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid 10V, Positive-QTOFsplash10-004m-0900000000-27dde8b0256fb7a080892021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid 20V, Positive-QTOFsplash10-004i-1900000000-a732760052ad67ca59082021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid 40V, Positive-QTOFsplash10-0a4i-9000000000-3311bf73e07b981897392021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (2R,6S)-2,6-Diaminoheptanedioic acid 10V, Negative-QTOFsplash10-0079-0900000000-a0ce1f9601e9b8d83ccf2021-10-12Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB030997
KNApSAcK IDNot Available
Chemspider ID842
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkDiaminopimelic acid
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI ID23673
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]