| Record Information |
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| Version | 5.0 |
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| Status | Detected and Quantified |
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| Creation Date | 2006-05-22 14:17:53 UTC |
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| Update Date | 2023-02-21 17:16:23 UTC |
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| HMDB ID | HMDB0002432 |
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| Secondary Accession Numbers | - HMDB0029188
- HMDB02432
- HMDB29188
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| Metabolite Identification |
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| Common Name | Sumiki's acid |
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| Description | Sumiki's acid is a naturally occurring human metabolite (PMID:949837 ). Sumiki's acid was first identified in the urine of a leukemic patient who was excreting an abnormal amount of its glycine derivative (PMID:5043270 ). Sumiki's acid was found to be excreted by normal subjects after a phenylalanine loading, while heterozygotes for phenylketonuria don't excrete it (instead, they excrete 2-hydroxybenzeneacetic acid) (PMID:4708049 ). Patients receiving furan-containing sugar solutions i.v. convert 50% of the 5-hydroxymethyl-2-furfural into Sumiki's acid (PMID:4202014 ). Sumiki's acid has been found to be a byproduct of the fungus Aspergillus and probably other species of fungi and yeast as well. |
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| Structure | InChI=1S/C6H6O4/c7-3-4-1-2-5(10-4)6(8)9/h1-2,7H,3H2,(H,8,9) |
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| Synonyms | | Value | Source |
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| 5-(Hydroxymethyl)-2-furoic acid | ChEBI | | 5-Hydroxymethyl-2-furancarboxylic acid | ChEBI | | 5-Hydroxymethyl-furan-2-carboxylic acid | ChEBI | | 5-Hydroxymethylfuran-2-carboxylic acid | ChEBI | | 5-Hydroxymethylfuranoic acid | ChEBI | | 5-Hydroxymethylfuroic acid | ChEBI | | 5-Hydroxymethyl-2-furoic acid | Kegg | | 5-(Hydroxymethyl)-2-furoate | Generator | | 5-Hydroxymethyl-2-furancarboxylate | Generator | | 5-Hydroxymethyl-furan-2-carboxylate | Generator | | 5-Hydroxymethylfuran-2-carboxylate | Generator | | 5-Hydroxymethylfuranoate | Generator | | 5-Hydroxymethylfuroate | Generator | | 5-Hydroxymethyl-2-furoate | Generator | | 5-(Hydroxymethyl)- 2-furancarboxylate | HMDB | | HMFA compound | MeSH, HMDB | | Sumiki's acid | ChEBI | | 2-(Hydroxymethyl)furan-5-carboxylic acid | HMDB | | 5-(Hydroxymethyl)-2-furancarboxylic acid | HMDB | | 5-Hydroxymethyl-2-furanoate | HMDB | | 5-Hydroxymethyl-2-furanoic acid | HMDB | | Sumikis' acid | HMDB | | Sumikis’ acid | HMDB | | Sumiki’s acid | HMDB |
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| Chemical Formula | C6H6O4 |
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| Average Molecular Weight | 142.1094 |
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| Monoisotopic Molecular Weight | 142.02660868 |
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| IUPAC Name | 5-(hydroxymethyl)furan-2-carboxylic acid |
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| Traditional Name | 5-hydroxymethyl-2-furoic acid |
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| CAS Registry Number | 6338-41-6 |
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| SMILES | OCC1=CC=C(O1)C(O)=O |
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| InChI Identifier | InChI=1S/C6H6O4/c7-3-4-1-2-5(10-4)6(8)9/h1-2,7H,3H2,(H,8,9) |
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| InChI Key | PCSKKIUURRTAEM-UHFFFAOYSA-N |
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| Chemical Taxonomy |
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| Description | Belongs to the class of organic compounds known as furoic acids. These are organic compounds containing a furoic acid moiety, with a structure characterized by a furan ring bearing a carboxylic acid group at the C2 or C3 carbon atom. |
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| Kingdom | Organic compounds |
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| Super Class | Organoheterocyclic compounds |
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| Class | Furans |
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| Sub Class | Furoic acid and derivatives |
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| Direct Parent | Furoic acids |
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| Alternative Parents | |
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| Substituents | - Furoic acid
- Heteroaromatic compound
- Oxacycle
- Monocarboxylic acid or derivatives
- Carboxylic acid
- Carboxylic acid derivative
- Organic oxygen compound
- Organic oxide
- Hydrocarbon derivative
- Aromatic alcohol
- Primary alcohol
- Organooxygen compound
- Alcohol
- Aromatic heteromonocyclic compound
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| Molecular Framework | Aromatic heteromonocyclic compounds |
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| External Descriptors | Not Available |
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| Ontology |
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| Physiological effect | Not Available |
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| Disposition | |
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| Process | Not Available |
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| Role | Not Available |
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| Physical Properties |
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| State | Solid |
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| Experimental Molecular Properties | |
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| Experimental Chromatographic Properties | Not Available |
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| Predicted Molecular Properties | |
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| Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Retention Times Underivatized| Chromatographic Method | Retention Time | Reference |
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| Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. Predicted by Afia on May 17, 2022. | 2.22 minutes | 32390414 | | Predicted by Siyang on May 30, 2022 | 9.4637 minutes | 33406817 | | Predicted by Siyang using ReTip algorithm on June 8, 2022 | 4.14 minutes | 32390414 | | AjsUoB = Accucore 150 Amide HILIC with 10mM Ammonium Formate, 0.1% Formic Acid | 86.6 seconds | 40023050 |
Predicted Kovats Retention IndicesUnderivatizedDerivatized| Derivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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| Sumiki's acid,1TMS,isomer #1 | C[Si](C)(C)OCC1=CC=C(C(=O)O)O1 | 1509.6 | Semi standard non polar | 33892256 | | Sumiki's acid,1TMS,isomer #2 | C[Si](C)(C)OC(=O)C1=CC=C(CO)O1 | 1452.9 | Semi standard non polar | 33892256 | | Sumiki's acid,2TMS,isomer #1 | C[Si](C)(C)OCC1=CC=C(C(=O)O[Si](C)(C)C)O1 | 1553.4 | Semi standard non polar | 33892256 | | Sumiki's acid,1TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)OCC1=CC=C(C(=O)O)O1 | 1733.1 | Semi standard non polar | 33892256 | | Sumiki's acid,1TBDMS,isomer #2 | CC(C)(C)[Si](C)(C)OC(=O)C1=CC=C(CO)O1 | 1693.8 | Semi standard non polar | 33892256 | | Sumiki's acid,2TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)OCC1=CC=C(C(=O)O[Si](C)(C)C(C)(C)C)O1 | 1994.8 | Semi standard non polar | 33892256 |
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| Spectra |
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| Biological Properties |
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| Cellular Locations | - Cytoplasm (predicted from logP)
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| Biospecimen Locations | |
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| Tissue Locations | Not Available |
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| Pathways | |
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| Normal Concentrations |
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| Blood | Expected but not Quantified | Not Quantified | Not Available | Not Available | Normal | | details | | Feces | Detected but not Quantified | Not Quantified | Adult (>18 years old) | Both | Normal | | details | | Feces | Detected but not Quantified | Not Quantified | Adult (>18 years old) | Both | Normal | | details | | Urine | Detected and Quantified | 15.1(1.4-28.8) umol/mmol creatinine | Newborn (0-30 days old) | Both | Normal | | details | | Urine | Detected and Quantified | 12.2 (0.9-34.4) umol/mmol creatinine | Children (1-13 years old) | Both | Normal | | details | | Urine | Detected and Quantified | 3.2 (0.9-44.0) umol/mmol creatinine | Children (1-13 years old) | Both | Normal | | details | | Urine | Detected and Quantified | 7.3 (0.8-26.1) umol/mmol creatinine | Adolescent (13-18 years old) | Both | Normal | | details | | Urine | Detected and Quantified | 1.6 umol/mmol creatinine | Adult (>18 years old) | Both | Normal | | details | | Urine | Detected and Quantified | 1.7 umol/mmol creatinine | Adult (>18 years old) | Both | Normal | | details | | Urine | Detected but not Quantified | Not Quantified | Adult (>18 years old) | Both | Normal | | details | | Urine | Detected and Quantified | 9.143 +/- 4.737 umol/mmol creatinine | Children (1 - 13 years old) | Not Specified | Normal | | details |
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| Abnormal Concentrations |
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| Feces | Detected but not Quantified | Not Quantified | Adult (>18 years old) | Both | Colorectal cancer | | details | | Urine | Detected and Quantified | 7.185 +/- 5.965 umol/mmol creatinine | Children (1 - 13 years old) | Not Specified | Eosinophilic esophagitis | | details | | Urine | Detected and Quantified | 8.298 +/- 6.579 umol/mmol creatinine | Children (1 - 13 years old) | Not Specified | Gastroesophageal reflux disease | | details | | Urine | Detected but not Quantified | Not Quantified | Adult (>18 years old) | Both | Bladder cancer | | details |
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| Associated Disorders and Diseases |
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| Disease References | | Colorectal cancer |
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- Goedert JJ, Sampson JN, Moore SC, Xiao Q, Xiong X, Hayes RB, Ahn J, Shi J, Sinha R: Fecal metabolomics: assay performance and association with colorectal cancer. Carcinogenesis. 2014 Sep;35(9):2089-96. doi: 10.1093/carcin/bgu131. Epub 2014 Jul 18. [PubMed:25037050 ]
| | Eosinophilic esophagitis |
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- Slae, M., Huynh, H., Wishart, D.S. (2014). Analysis of 30 normal pediatric urine samples via NMR spectroscopy (unpublished work). NA.
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| Associated OMIM IDs | - 114500 (Colorectal cancer)
- 610247 (Eosinophilic esophagitis)
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| External Links |
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| DrugBank ID | Not Available |
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| Phenol Explorer Compound ID | Not Available |
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| FooDB ID | FDB023004 |
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| KNApSAcK ID | C00052414 |
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| Chemspider ID | 72827 |
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| KEGG Compound ID | C20448 |
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| BioCyc ID | CPD-14103 |
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| BiGG ID | Not Available |
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| Wikipedia Link | Not Available |
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| METLIN ID | 6680 |
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| PubChem Compound | 80642 |
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| PDB ID | Not Available |
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| ChEBI ID | 89118 |
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| Food Biomarker Ontology | Not Available |
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| VMH ID | Not Available |
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| MarkerDB ID | Not Available |
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| Good Scents ID | rw1059531 |
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| References |
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| Synthesis Reference | Shmagina, N. N.; Moshkin, P. A. Preparation of 5-hydroxymethyl-2-furoic acid and its butyl ester. Plasticheskie Massy (1964), (2), 51-2. |
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| Material Safety Data Sheet (MSDS) | Download (PDF) |
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| General References | - Lawson AM, Chalmers RA, Watts RW: Urinary organic acids in man. I. Normal patterns. Clin Chem. 1976 Aug;22(8):1283-7. [PubMed:949837 ]
- Mrochek JE, Rainey WT Jr: Identification and biochemical significance of substituted furans in human urine. Clin Chem. 1972 Aug;18(8):821-8. [PubMed:5043270 ]
- Blau K, Summer GK, Newsome HC, Edwards CH: Phenylalanine loading and aromatic acid excretion in normal subjects and heterozygotes for phenylketonuria. Clin Chim Acta. 1973 May 18;45(3):197-205. [PubMed:4708049 ]
- Jellum E, Borresen HC, Eldjarn L: The presence of furan derivatives in patients receiving fructose-containing solutions intravenously. Clin Chim Acta. 1973 Aug 30;47(2):191-201. [PubMed:4202014 ]
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