Hmdb loader
Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 07:21:28 UTC
Update Date2022-11-23 22:02:39 UTC
HMDB IDHMDB0250353
Secondary Accession NumbersNone
Metabolite Identification
Common NameChlosudimeprimylum
Descriptionclopamide, also known as brinaldix or brinedine, belongs to the class of organic compounds known as benzenesulfonamides. These are organic compounds containing a sulfonamide group that is S-linked to a benzene ring. Based on a literature review very few articles have been published on clopamide. This compound has been identified in human blood as reported by (PMID: 31557052 ). Chlosudimeprimylum is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Chlosudimeprimylum is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
BrinaldixMeSH
BrinedineMeSH
AquexChEMBL
DT-327ChlosudimeprimylumChEMBL
4-Chloro-N-(2,6-dimethylpiperidin-1-yl)-3-sulfamoylbenzene-1-carboximidateGenerator
4-Chloro-N-(2,6-dimethylpiperidin-1-yl)-3-sulphamoylbenzene-1-carboximidateGenerator
4-Chloro-N-(2,6-dimethylpiperidin-1-yl)-3-sulphamoylbenzene-1-carboximidic acidGenerator
Chemical FormulaC14H20ClN3O3S
Average Molecular Weight345.84
Monoisotopic Molecular Weight345.0913904
IUPAC Name4-chloro-N-(2,6-dimethylpiperidin-1-yl)-3-sulfamoylbenzene-1-carboximidic acid
Traditional Nameclopamide
CAS Registry NumberNot Available
SMILES
CC1CCCC(C)N1N=C(O)C1=CC(=C(Cl)C=C1)S(N)(=O)=O
InChI Identifier
InChI=1S/C14H20ClN3O3S/c1-9-4-3-5-10(2)18(9)17-14(19)11-6-7-12(15)13(8-11)22(16,20)21/h6-10H,3-5H2,1-2H3,(H,17,19)(H2,16,20,21)
InChI KeyLBXHRAWDUMTPSE-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as benzenesulfonamides. These are organic compounds containing a sulfonamide group that is S-linked to a benzene ring.
KingdomOrganic compounds
Super ClassBenzenoids
ClassBenzene and substituted derivatives
Sub ClassBenzenesulfonamides
Direct ParentBenzenesulfonamides
Alternative Parents
Substituents
  • Benzenesulfonamide
  • Halobenzoic acid or derivatives
  • 4-halobenzoic acid or derivatives
  • Benzoic acid or derivatives
  • Benzenesulfonyl group
  • Benzoyl
  • Chlorobenzene
  • Halobenzene
  • Aryl chloride
  • Aryl halide
  • Piperidine
  • Organosulfonic acid amide
  • Aminosulfonyl compound
  • Organic sulfonic acid or derivatives
  • Organosulfonic acid or derivatives
  • Sulfonyl
  • Carboxylic acid hydrazide
  • Organoheterocyclic compound
  • Azacycle
  • Carboxylic acid derivative
  • Organosulfur compound
  • Organooxygen compound
  • Organonitrogen compound
  • Organochloride
  • Organohalogen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Organic nitrogen compound
  • Organic oxygen compound
  • Organopnictogen compound
  • Aromatic heteromonocyclic compound
Molecular FrameworkAromatic heteromonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP2.33ALOGPS
logP2.41ChemAxon
logS-3.8ALOGPS
pKa (Strongest Acidic)7.13ChemAxon
pKa (Strongest Basic)1.53ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area95.99 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity86.69 m³·mol⁻¹ChemAxon
Polarizability34.78 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+182.22930932474
DeepCCS[M-H]-179.87230932474
DeepCCS[M-2H]-212.75830932474
DeepCCS[M+Na]+188.32330932474
AllCCS[M+H]+178.732859911
AllCCS[M+H-H2O]+175.632859911
AllCCS[M+NH4]+181.532859911
AllCCS[M+Na]+182.332859911
AllCCS[M-H]-176.132859911
AllCCS[M+Na-2H]-176.532859911
AllCCS[M+HCOO]-177.032859911

Predicted Kovats Retention Indices

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Aquex,1TMS,isomer #1CC1CCCC(C)N1N=C(O[Si](C)(C)C)C1=CC=C(Cl)C(S(N)(=O)=O)=C12927.5Semi standard non polar33892256
Aquex,1TMS,isomer #1CC1CCCC(C)N1N=C(O[Si](C)(C)C)C1=CC=C(Cl)C(S(N)(=O)=O)=C12810.3Standard non polar33892256
Aquex,1TMS,isomer #1CC1CCCC(C)N1N=C(O[Si](C)(C)C)C1=CC=C(Cl)C(S(N)(=O)=O)=C14338.7Standard polar33892256
Aquex,1TMS,isomer #2CC1CCCC(C)N1N=C(O)C1=CC=C(Cl)C(S(=O)(=O)N[Si](C)(C)C)=C12905.9Semi standard non polar33892256
Aquex,1TMS,isomer #2CC1CCCC(C)N1N=C(O)C1=CC=C(Cl)C(S(=O)(=O)N[Si](C)(C)C)=C12833.5Standard non polar33892256
Aquex,1TMS,isomer #2CC1CCCC(C)N1N=C(O)C1=CC=C(Cl)C(S(=O)(=O)N[Si](C)(C)C)=C13839.1Standard polar33892256
Aquex,2TMS,isomer #1CC1CCCC(C)N1N=C(O[Si](C)(C)C)C1=CC=C(Cl)C(S(=O)(=O)N[Si](C)(C)C)=C12875.6Semi standard non polar33892256
Aquex,2TMS,isomer #1CC1CCCC(C)N1N=C(O[Si](C)(C)C)C1=CC=C(Cl)C(S(=O)(=O)N[Si](C)(C)C)=C12963.2Standard non polar33892256
Aquex,2TMS,isomer #1CC1CCCC(C)N1N=C(O[Si](C)(C)C)C1=CC=C(Cl)C(S(=O)(=O)N[Si](C)(C)C)=C13662.1Standard polar33892256
Aquex,2TMS,isomer #2CC1CCCC(C)N1N=C(O)C1=CC=C(Cl)C(S(=O)(=O)N([Si](C)(C)C)[Si](C)(C)C)=C12882.3Semi standard non polar33892256
Aquex,2TMS,isomer #2CC1CCCC(C)N1N=C(O)C1=CC=C(Cl)C(S(=O)(=O)N([Si](C)(C)C)[Si](C)(C)C)=C13028.0Standard non polar33892256
Aquex,2TMS,isomer #2CC1CCCC(C)N1N=C(O)C1=CC=C(Cl)C(S(=O)(=O)N([Si](C)(C)C)[Si](C)(C)C)=C13800.1Standard polar33892256
Aquex,3TMS,isomer #1CC1CCCC(C)N1N=C(O[Si](C)(C)C)C1=CC=C(Cl)C(S(=O)(=O)N([Si](C)(C)C)[Si](C)(C)C)=C12832.6Semi standard non polar33892256
Aquex,3TMS,isomer #1CC1CCCC(C)N1N=C(O[Si](C)(C)C)C1=CC=C(Cl)C(S(=O)(=O)N([Si](C)(C)C)[Si](C)(C)C)=C13152.2Standard non polar33892256
Aquex,3TMS,isomer #1CC1CCCC(C)N1N=C(O[Si](C)(C)C)C1=CC=C(Cl)C(S(=O)(=O)N([Si](C)(C)C)[Si](C)(C)C)=C13612.6Standard polar33892256
Aquex,1TBDMS,isomer #1CC1CCCC(C)N1N=C(O[Si](C)(C)C(C)(C)C)C1=CC=C(Cl)C(S(N)(=O)=O)=C13131.5Semi standard non polar33892256
Aquex,1TBDMS,isomer #1CC1CCCC(C)N1N=C(O[Si](C)(C)C(C)(C)C)C1=CC=C(Cl)C(S(N)(=O)=O)=C13057.5Standard non polar33892256
Aquex,1TBDMS,isomer #1CC1CCCC(C)N1N=C(O[Si](C)(C)C(C)(C)C)C1=CC=C(Cl)C(S(N)(=O)=O)=C14362.3Standard polar33892256
Aquex,1TBDMS,isomer #2CC1CCCC(C)N1N=C(O)C1=CC=C(Cl)C(S(=O)(=O)N[Si](C)(C)C(C)(C)C)=C13131.8Semi standard non polar33892256
Aquex,1TBDMS,isomer #2CC1CCCC(C)N1N=C(O)C1=CC=C(Cl)C(S(=O)(=O)N[Si](C)(C)C(C)(C)C)=C13091.1Standard non polar33892256
Aquex,1TBDMS,isomer #2CC1CCCC(C)N1N=C(O)C1=CC=C(Cl)C(S(=O)(=O)N[Si](C)(C)C(C)(C)C)=C13914.9Standard polar33892256
Aquex,2TBDMS,isomer #1CC1CCCC(C)N1N=C(O[Si](C)(C)C(C)(C)C)C1=CC=C(Cl)C(S(=O)(=O)N[Si](C)(C)C(C)(C)C)=C13272.4Semi standard non polar33892256
Aquex,2TBDMS,isomer #1CC1CCCC(C)N1N=C(O[Si](C)(C)C(C)(C)C)C1=CC=C(Cl)C(S(=O)(=O)N[Si](C)(C)C(C)(C)C)=C13473.6Standard non polar33892256
Aquex,2TBDMS,isomer #1CC1CCCC(C)N1N=C(O[Si](C)(C)C(C)(C)C)C1=CC=C(Cl)C(S(=O)(=O)N[Si](C)(C)C(C)(C)C)=C13743.0Standard polar33892256
Aquex,2TBDMS,isomer #2CC1CCCC(C)N1N=C(O)C1=CC=C(Cl)C(S(=O)(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=C13288.3Semi standard non polar33892256
Aquex,2TBDMS,isomer #2CC1CCCC(C)N1N=C(O)C1=CC=C(Cl)C(S(=O)(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=C13519.5Standard non polar33892256
Aquex,2TBDMS,isomer #2CC1CCCC(C)N1N=C(O)C1=CC=C(Cl)C(S(=O)(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=C13896.4Standard polar33892256
Aquex,3TBDMS,isomer #1CC1CCCC(C)N1N=C(O[Si](C)(C)C(C)(C)C)C1=CC=C(Cl)C(S(=O)(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=C13466.4Semi standard non polar33892256
Aquex,3TBDMS,isomer #1CC1CCCC(C)N1N=C(O[Si](C)(C)C(C)(C)C)C1=CC=C(Cl)C(S(=O)(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=C13868.0Standard non polar33892256
Aquex,3TBDMS,isomer #1CC1CCCC(C)N1N=C(O[Si](C)(C)C(C)(C)C)C1=CC=C(Cl)C(S(=O)(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=C13745.3Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Chlosudimeprimylum GC-MS (Non-derivatized) - 70eV, Positivesplash10-014i-3293000000-d5469b3ebccd097b75dc2021-09-23Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Chlosudimeprimylum GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Chlosudimeprimylum GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlosudimeprimylum 10V, Positive-QTOFsplash10-0002-0209000000-0ad14d1b5efd990251eb2016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlosudimeprimylum 20V, Positive-QTOFsplash10-03dj-1897000000-3b52942234db82437ad02016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlosudimeprimylum 40V, Positive-QTOFsplash10-0296-9740000000-f99e586079b5d5192d852016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlosudimeprimylum 10V, Negative-QTOFsplash10-0006-1119000000-ac256c7f27514da9b3122016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlosudimeprimylum 20V, Negative-QTOFsplash10-004l-9436000000-4c9350da5402ff1fc31f2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlosudimeprimylum 40V, Negative-QTOFsplash10-004i-9210000000-4dc9dc548383f6f1829d2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlosudimeprimylum 10V, Positive-QTOFsplash10-0002-0009000000-b609f5e7529e74a3329b2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlosudimeprimylum 20V, Positive-QTOFsplash10-0002-0019000000-abe23b26a677cf2a82052021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlosudimeprimylum 40V, Positive-QTOFsplash10-052k-9242000000-2f240af4a55c92af8ca32021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlosudimeprimylum 10V, Negative-QTOFsplash10-0006-0009000000-75d0c8bd4b3a399aa3682021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlosudimeprimylum 20V, Negative-QTOFsplash10-002f-7169000000-9a4fdbc37e1b81fc58f12021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlosudimeprimylum 40V, Negative-QTOFsplash10-004i-9210000000-3155c70cf1ba55e9f0902021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID2702
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkClopamide
METLIN IDNot Available
PubChem Compound2804
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]