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Showing metabocard for D-Ribose 1-phosphate (HMDB0250796)

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enzymes (6) Show 6 proteins
Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 07:54:16 UTC
Update Date2021-10-01 21:19:12 UTC
HMDB IDHMDB0250796
Secondary Accession NumbersNone
Metabolite Identification
Common NameD-Ribose 1-phosphate
Description{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}phosphonic acid belongs to the class of organic compounds known as pentoses. These are monosaccharides in which the carbohydrate moiety contains five carbon atoms. Based on a literature review very few articles have been published on {[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}phosphonic acid. This compound has been identified in human blood as reported by (PMID: 31557052 ). D-ribose 1-phosphate is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically D-Ribose 1-phosphate is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
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MOL3D MOLSDF3D SDFPDB3D PDBSMILESInChI

MOL for HMDB0250796 (D-Ribose 1-phosphate)


  Mrv1652309112109542D          

 14 14  0  0  0  0            999 V2000
    0.5678    1.9393    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5678    1.1143    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2352    0.6294    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9803   -0.1553    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1553   -0.1553    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0997    0.6294    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3297   -0.8227    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0059   -1.5764    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
    0.3415   -2.3300    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7596   -1.2408    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7478   -1.9119    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4652   -0.8227    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.0198    0.8843    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1467    2.3518    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  2  6  1  0  0  0  0
  5  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  2  0  0  0  0
  8 10  1  0  0  0  0
  8 11  1  0  0  0  0
  4 12  1  0  0  0  0
  3 13  1  0  0  0  0
  1 14  1  0  0  0  0
M  END
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3D MOL for HMDB0250796 (D-Ribose 1-phosphate)

HMDB0258009
     RDKit          3D
alpha-L-Arabinofuranose 1-phosphoric acid
 25 25  0  0  0  0  0  0  0  0999 V2000
    4.1434    0.4012    1.4952 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0974    0.5184    0.4028 P   0  0  0  0  0  5  0  0  0  0  0  0
    3.3593    1.9953   -0.3726 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3787   -0.7028   -0.7231 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5735    0.4121    1.0940 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5953    0.1562    0.1759 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4337    1.0924    0.1610 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4393    0.5397   -0.5918 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8168    0.9947   -0.1523 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9081    2.3758   -0.2695 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3311   -0.9605   -0.4890 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4932   -1.5652   -0.0673 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2059   -1.1018    0.5431 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5194   -2.2502    0.3768 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.3399    2.2132   -0.3782 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4512   -1.5910   -0.2661 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9640    0.0617   -0.8637 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3184    0.8529   -1.6408 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0200    0.7386    0.9074 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5489    0.4545   -0.7885 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6665    2.6979   -1.1753 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9326   -1.4111   -1.4351 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2827   -2.5147    0.1179 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6433   -0.9485    1.5282 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6186   -2.4587   -0.5770 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  2  4  1  0
  2  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
  8 11  1  0
 11 12  1  0
 11 13  1  0
 13 14  1  0
 13  6  1  0
  3 15  1  0
  4 16  1  0
  6 17  1  0
  8 18  1  0
  9 19  1  0
  9 20  1  0
 10 21  1  0
 11 22  1  0
 12 23  1  0
 13 24  1  0
 14 25  1  0
M  END
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3D SDF for HMDB0250796 (D-Ribose 1-phosphate)


  Mrv1652309112109542D          

 14 14  0  0  0  0            999 V2000
    0.5678    1.9393    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5678    1.1143    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2352    0.6294    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9803   -0.1553    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1553   -0.1553    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0997    0.6294    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3297   -0.8227    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0059   -1.5764    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
    0.3415   -2.3300    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7596   -1.2408    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7478   -1.9119    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4652   -0.8227    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.0198    0.8843    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1467    2.3518    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  2  6  1  0  0  0  0
  5  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  2  0  0  0  0
  8 10  1  0  0  0  0
  8 11  1  0  0  0  0
  4 12  1  0  0  0  0
  3 13  1  0  0  0  0
  1 14  1  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0250796

> <DATABASE_NAME>
hmdb

> <SMILES>
OCC1OC(OP(O)(O)=O)C(O)C1O

> <INCHI_IDENTIFIER>
InChI=1S/C5H11O8P/c6-1-2-3(7)4(8)5(12-2)13-14(9,10)11/h2-8H,1H2,(H2,9,10,11)

> <INCHI_KEY>
YXJDFQJKERBOBM-UHFFFAOYSA-N

> <FORMULA>
C5H11O8P

> <MOLECULAR_WEIGHT>
230.109

> <EXACT_MASS>
230.019154312

> <JCHEM_ACCEPTOR_COUNT>
7

> <JCHEM_ATOM_COUNT>
25

> <JCHEM_AVERAGE_POLARIZABILITY>
18.338000610648557

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
5

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}phosphonic acid

> <ALOGPS_LOGP>
-2.04

> <JCHEM_LOGP>
-2.425770307333333

> <ALOGPS_LOGS>
-0.82

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-2

> <JCHEM_PKA>
6.218897432342066

> <JCHEM_PKA_STRONGEST_ACIDIC>
1.1553760127282273

> <JCHEM_PKA_STRONGEST_BASIC>
-2.9811597090040385

> <JCHEM_POLAR_SURFACE_AREA>
136.68

> <JCHEM_REFRACTIVITY>
40.8338

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
3.52e+01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxyphosphonic acid

> <JCHEM_VEBER_RULE>
0

$$$$
Download

3D-SDF for HMDB0250796 (D-Ribose 1-phosphate)

HMDB0258009
     RDKit          3D
alpha-L-Arabinofuranose 1-phosphoric acid
 25 25  0  0  0  0  0  0  0  0999 V2000
    4.1434    0.4012    1.4952 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0974    0.5184    0.4028 P   0  0  0  0  0  5  0  0  0  0  0  0
    3.3593    1.9953   -0.3726 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3787   -0.7028   -0.7231 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5735    0.4121    1.0940 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5953    0.1562    0.1759 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4337    1.0924    0.1610 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4393    0.5397   -0.5918 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8168    0.9947   -0.1523 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9081    2.3758   -0.2695 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3311   -0.9605   -0.4890 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4932   -1.5652   -0.0673 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2059   -1.1018    0.5431 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5194   -2.2502    0.3768 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.3399    2.2132   -0.3782 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4512   -1.5910   -0.2661 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9640    0.0617   -0.8637 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3184    0.8529   -1.6408 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0200    0.7386    0.9074 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5489    0.4545   -0.7885 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6665    2.6979   -1.1753 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9326   -1.4111   -1.4351 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2827   -2.5147    0.1179 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6433   -0.9485    1.5282 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6186   -2.4587   -0.5770 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  2  4  1  0
  2  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
  8 11  1  0
 11 12  1  0
 11 13  1  0
 13 14  1  0
 13  6  1  0
  3 15  1  0
  4 16  1  0
  6 17  1  0
  8 18  1  0
  9 19  1  0
  9 20  1  0
 10 21  1  0
 11 22  1  0
 12 23  1  0
 13 24  1  0
 14 25  1  0
M  END
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PDB for HMDB0250796 (D-Ribose 1-phosphate)

HEADER    PROTEIN                                 11-SEP-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   11-SEP-21         0                                  
HETATM    1  C   UNK     0       1.060   3.620   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       1.060   2.080   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       2.306   1.175   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       1.830  -0.290   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       0.290  -0.290   0.000  0.00  0.00           C+0
HETATM    6  O   UNK     0      -0.186   1.175   0.000  0.00  0.00           O+0
HETATM    7  O   UNK     0      -0.615  -1.536   0.000  0.00  0.00           O+0
HETATM    8  P   UNK     0       0.011  -2.943   0.000  0.00  0.00           P+0
HETATM    9  O   UNK     0       0.637  -4.349   0.000  0.00  0.00           O+0
HETATM   10  O   UNK     0       1.418  -2.316   0.000  0.00  0.00           O+0
HETATM   11  O   UNK     0      -1.396  -3.569   0.000  0.00  0.00           O+0
HETATM   12  O   UNK     0       2.735  -1.536   0.000  0.00  0.00           O+0
HETATM   13  O   UNK     0       3.770   1.651   0.000  0.00  0.00           O+0
HETATM   14  O   UNK     0      -0.274   4.390   0.000  0.00  0.00           O+0
CONECT    1    2   14                                                       
CONECT    2    1    3    6                                                  
CONECT    3    2    4   13                                                  
CONECT    4    3    5   12                                                  
CONECT    5    4    6    7                                                  
CONECT    6    5    2                                                       
CONECT    7    5    8                                                       
CONECT    8    7    9   10   11                                             
CONECT    9    8                                                            
CONECT   10    8                                                            
CONECT   11    8                                                            
CONECT   12    4                                                            
CONECT   13    3                                                            
CONECT   14    1                                                            
MASTER        0    0    0    0    0    0    0    0   14    0   28    0
END
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3D PDB for HMDB0250796 (D-Ribose 1-phosphate)

COMPND    HMDB0258009
HETATM    1  O1  UNL     1       4.143   0.401   1.495  1.00  0.00           O  
HETATM    2  P1  UNL     1       3.097   0.518   0.403  1.00  0.00           P  
HETATM    3  O2  UNL     1       3.359   1.995  -0.373  1.00  0.00           O  
HETATM    4  O3  UNL     1       3.379  -0.703  -0.723  1.00  0.00           O  
HETATM    5  O4  UNL     1       1.573   0.412   1.094  1.00  0.00           O  
HETATM    6  C1  UNL     1       0.595   0.156   0.176  1.00  0.00           C  
HETATM    7  O5  UNL     1      -0.434   1.092   0.161  1.00  0.00           O  
HETATM    8  C2  UNL     1      -1.439   0.540  -0.592  1.00  0.00           C  
HETATM    9  C3  UNL     1      -2.817   0.995  -0.152  1.00  0.00           C  
HETATM   10  O6  UNL     1      -2.908   2.376  -0.270  1.00  0.00           O  
HETATM   11  C4  UNL     1      -1.331  -0.961  -0.489  1.00  0.00           C  
HETATM   12  O7  UNL     1      -2.493  -1.565  -0.067  1.00  0.00           O  
HETATM   13  C5  UNL     1      -0.206  -1.102   0.543  1.00  0.00           C  
HETATM   14  O8  UNL     1       0.519  -2.250   0.377  1.00  0.00           O  
HETATM   15  H1  UNL     1       4.340   2.213  -0.378  1.00  0.00           H  
HETATM   16  H2  UNL     1       3.451  -1.591  -0.266  1.00  0.00           H  
HETATM   17  H3  UNL     1       0.964   0.062  -0.864  1.00  0.00           H  
HETATM   18  H4  UNL     1      -1.318   0.853  -1.641  1.00  0.00           H  
HETATM   19  H5  UNL     1      -3.020   0.739   0.907  1.00  0.00           H  
HETATM   20  H6  UNL     1      -3.549   0.454  -0.789  1.00  0.00           H  
HETATM   21  H7  UNL     1      -2.667   2.698  -1.175  1.00  0.00           H  
HETATM   22  H8  UNL     1      -0.933  -1.411  -1.435  1.00  0.00           H  
HETATM   23  H9  UNL     1      -2.283  -2.515   0.118  1.00  0.00           H  
HETATM   24  H10 UNL     1      -0.643  -0.949   1.528  1.00  0.00           H  
HETATM   25  H11 UNL     1       0.619  -2.459  -0.577  1.00  0.00           H  
CONECT    1    2    2
CONECT    2    3    4    5
CONECT    3   15
CONECT    4   16
CONECT    5    6
CONECT    6    7   13   17
CONECT    7    8
CONECT    8    9   11   18
CONECT    9   10   19   20
CONECT   10   21
CONECT   11   12   13   22
CONECT   12   23
CONECT   13   14   24
CONECT   14   25
END
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SMILES for HMDB0250796 (D-Ribose 1-phosphate)

OCC1OC(OP(O)(O)=O)C(O)C1O
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INCHI for HMDB0250796 (D-Ribose 1-phosphate)

InChI=1S/C5H11O8P/c6-1-2-3(7)4(8)5(12-2)13-14(9,10)11/h2-8H,1H2,(H2,9,10,11)
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View in JSmolView Stereo Labels
Synonyms
ValueSource
{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}phosphonateGenerator
D-Ribose 1-phosphoric acidGenerator
Chemical FormulaC5H11O8P
Average Molecular Weight230.109
Monoisotopic Molecular Weight230.019154312
IUPAC Name{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}phosphonic acid
Traditional Name[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxyphosphonic acid
CAS Registry NumberNot Available
SMILES
OCC1OC(OP(O)(O)=O)C(O)C1O
InChI Identifier
InChI=1S/C5H11O8P/c6-1-2-3(7)4(8)5(12-2)13-14(9,10)11/h2-8H,1H2,(H2,9,10,11)
InChI KeyYXJDFQJKERBOBM-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as pentoses. These are monosaccharides in which the carbohydrate moiety contains five carbon atoms.
KingdomOrganic compounds
Super ClassOrganic oxygen compounds
ClassOrganooxygen compounds
Sub ClassCarbohydrates and carbohydrate conjugates
Direct ParentPentoses
Alternative Parents
Substituents
  • Pentose monosaccharide
  • Monoalkyl phosphate
  • Alkyl phosphate
  • Phosphoric acid ester
  • Organic phosphoric acid derivative
  • Tetrahydrofuran
  • Secondary alcohol
  • Oxacycle
  • Organoheterocyclic compound
  • Organic oxide
  • Hydrocarbon derivative
  • Primary alcohol
  • Alcohol
  • Aliphatic heteromonocyclic compound
Molecular FrameworkAliphatic heteromonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Biological location
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP-2ALOGPS
logP-2.4ChemAxon
logS-0.82ALOGPS
pKa (Strongest Acidic)1.16ChemAxon
pKa (Strongest Basic)-3ChemAxon
Physiological Charge-2ChemAxon
Hydrogen Acceptor Count7ChemAxon
Hydrogen Donor Count5ChemAxon
Polar Surface Area136.68 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity40.83 m³·mol⁻¹ChemAxon
Polarizability18.34 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+140.78130932474
DeepCCS[M-H]-138.39330932474
DeepCCS[M-2H]-173.81630932474
DeepCCS[M+Na]+149.16230932474
AllCCS[M+H]+150.232859911
AllCCS[M+H-H2O]+146.432859911
AllCCS[M+NH4]+153.732859911
AllCCS[M+Na]+154.732859911
AllCCS[M-H]-140.132859911
AllCCS[M+Na-2H]-140.732859911
AllCCS[M+HCOO]-141.532859911

Predicted Kovats Retention Indices

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
D-Ribose 1-phosphate,1TMS,isomer #2C[Si](C)(C)OC1C(OP(=O)(O)O)OC(CO)C1O2086.7Semi standard non polar33892256
D-Ribose 1-phosphate,1TMS,isomer #2C[Si](C)(C)OC1C(OP(=O)(O)O)OC(CO)C1O1903.6Standard non polar33892256
D-Ribose 1-phosphate,1TMS,isomer #2C[Si](C)(C)OC1C(OP(=O)(O)O)OC(CO)C1O3478.7Standard polar33892256
D-Ribose 1-phosphate,1TMS,isomer #3C[Si](C)(C)OC1C(CO)OC(OP(=O)(O)O)C1O2071.6Semi standard non polar33892256
D-Ribose 1-phosphate,1TMS,isomer #3C[Si](C)(C)OC1C(CO)OC(OP(=O)(O)O)C1O1895.2Standard non polar33892256
D-Ribose 1-phosphate,1TMS,isomer #3C[Si](C)(C)OC1C(CO)OC(OP(=O)(O)O)C1O3426.3Standard polar33892256
D-Ribose 1-phosphate,2TMS,isomer #3C[Si](C)(C)OCC1OC(OP(=O)(O)O[Si](C)(C)C)C(O)C1O2115.1Semi standard non polar33892256
D-Ribose 1-phosphate,2TMS,isomer #3C[Si](C)(C)OCC1OC(OP(=O)(O)O[Si](C)(C)C)C(O)C1O2051.7Standard non polar33892256
D-Ribose 1-phosphate,2TMS,isomer #3C[Si](C)(C)OCC1OC(OP(=O)(O)O[Si](C)(C)C)C(O)C1O2892.1Standard polar33892256
D-Ribose 1-phosphate,2TMS,isomer #4C[Si](C)(C)OC1C(CO)OC(OP(=O)(O)O)C1O[Si](C)(C)C2050.7Semi standard non polar33892256
D-Ribose 1-phosphate,2TMS,isomer #4C[Si](C)(C)OC1C(CO)OC(OP(=O)(O)O)C1O[Si](C)(C)C2013.7Standard non polar33892256
D-Ribose 1-phosphate,2TMS,isomer #4C[Si](C)(C)OC1C(CO)OC(OP(=O)(O)O)C1O[Si](C)(C)C2933.3Standard polar33892256
D-Ribose 1-phosphate,2TMS,isomer #5C[Si](C)(C)OC1C(OP(=O)(O)O[Si](C)(C)C)OC(CO)C1O2097.0Semi standard non polar33892256
D-Ribose 1-phosphate,2TMS,isomer #5C[Si](C)(C)OC1C(OP(=O)(O)O[Si](C)(C)C)OC(CO)C1O2027.4Standard non polar33892256
D-Ribose 1-phosphate,2TMS,isomer #5C[Si](C)(C)OC1C(OP(=O)(O)O[Si](C)(C)C)OC(CO)C1O2876.0Standard polar33892256
D-Ribose 1-phosphate,3TMS,isomer #2C[Si](C)(C)OCC1OC(OP(=O)(O)O[Si](C)(C)C)C(O[Si](C)(C)C)C1O2099.6Semi standard non polar33892256
D-Ribose 1-phosphate,3TMS,isomer #2C[Si](C)(C)OCC1OC(OP(=O)(O)O[Si](C)(C)C)C(O[Si](C)(C)C)C1O2126.3Standard non polar33892256
D-Ribose 1-phosphate,3TMS,isomer #2C[Si](C)(C)OCC1OC(OP(=O)(O)O[Si](C)(C)C)C(O[Si](C)(C)C)C1O2618.5Standard polar33892256
D-Ribose 1-phosphate,3TMS,isomer #3C[Si](C)(C)OCC1OC(OP(=O)(O)O[Si](C)(C)C)C(O)C1O[Si](C)(C)C2094.9Semi standard non polar33892256
D-Ribose 1-phosphate,3TMS,isomer #3C[Si](C)(C)OCC1OC(OP(=O)(O)O[Si](C)(C)C)C(O)C1O[Si](C)(C)C2127.3Standard non polar33892256
D-Ribose 1-phosphate,3TMS,isomer #3C[Si](C)(C)OCC1OC(OP(=O)(O)O[Si](C)(C)C)C(O)C1O[Si](C)(C)C2602.2Standard polar33892256
D-Ribose 1-phosphate,3TMS,isomer #5C[Si](C)(C)OC1C(CO)OC(OP(=O)(O)O[Si](C)(C)C)C1O[Si](C)(C)C2075.5Semi standard non polar33892256
D-Ribose 1-phosphate,3TMS,isomer #5C[Si](C)(C)OC1C(CO)OC(OP(=O)(O)O[Si](C)(C)C)C1O[Si](C)(C)C2094.6Standard non polar33892256
D-Ribose 1-phosphate,3TMS,isomer #5C[Si](C)(C)OC1C(CO)OC(OP(=O)(O)O[Si](C)(C)C)C1O[Si](C)(C)C2557.1Standard polar33892256
D-Ribose 1-phosphate,3TMS,isomer #6C[Si](C)(C)OC1C(OP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)OC(CO)C1O2058.6Semi standard non polar33892256
D-Ribose 1-phosphate,3TMS,isomer #6C[Si](C)(C)OC1C(OP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)OC(CO)C1O2148.4Standard non polar33892256
D-Ribose 1-phosphate,3TMS,isomer #6C[Si](C)(C)OC1C(OP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)OC(CO)C1O2536.9Standard polar33892256
D-Ribose 1-phosphate,4TMS,isomer #1C[Si](C)(C)OCC1OC(OP(=O)(O)O[Si](C)(C)C)C(O[Si](C)(C)C)C1O[Si](C)(C)C2061.5Semi standard non polar33892256
D-Ribose 1-phosphate,4TMS,isomer #1C[Si](C)(C)OCC1OC(OP(=O)(O)O[Si](C)(C)C)C(O[Si](C)(C)C)C1O[Si](C)(C)C2131.4Standard non polar33892256
D-Ribose 1-phosphate,4TMS,isomer #1C[Si](C)(C)OCC1OC(OP(=O)(O)O[Si](C)(C)C)C(O[Si](C)(C)C)C1O[Si](C)(C)C2350.8Standard polar33892256
D-Ribose 1-phosphate,4TMS,isomer #2C[Si](C)(C)OCC1OC(OP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)C(O[Si](C)(C)C)C1O2075.9Semi standard non polar33892256
D-Ribose 1-phosphate,4TMS,isomer #2C[Si](C)(C)OCC1OC(OP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)C(O[Si](C)(C)C)C1O2204.5Standard non polar33892256
D-Ribose 1-phosphate,4TMS,isomer #2C[Si](C)(C)OCC1OC(OP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)C(O[Si](C)(C)C)C1O2350.1Standard polar33892256
D-Ribose 1-phosphate,4TMS,isomer #3C[Si](C)(C)OCC1OC(OP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)C(O)C1O[Si](C)(C)C2075.2Semi standard non polar33892256
D-Ribose 1-phosphate,4TMS,isomer #3C[Si](C)(C)OCC1OC(OP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)C(O)C1O[Si](C)(C)C2202.0Standard non polar33892256
D-Ribose 1-phosphate,4TMS,isomer #3C[Si](C)(C)OCC1OC(OP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)C(O)C1O[Si](C)(C)C2341.7Standard polar33892256
D-Ribose 1-phosphate,4TMS,isomer #4C[Si](C)(C)OC1C(CO)OC(OP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)C1O[Si](C)(C)C2053.7Semi standard non polar33892256
D-Ribose 1-phosphate,4TMS,isomer #4C[Si](C)(C)OC1C(CO)OC(OP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)C1O[Si](C)(C)C2163.3Standard non polar33892256
D-Ribose 1-phosphate,4TMS,isomer #4C[Si](C)(C)OC1C(CO)OC(OP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)C1O[Si](C)(C)C2306.1Standard polar33892256
D-Ribose 1-phosphate,5TMS,isomer #1C[Si](C)(C)OCC1OC(OP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)C(O[Si](C)(C)C)C1O[Si](C)(C)C2052.0Semi standard non polar33892256
D-Ribose 1-phosphate,5TMS,isomer #1C[Si](C)(C)OCC1OC(OP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)C(O[Si](C)(C)C)C1O[Si](C)(C)C2181.2Standard non polar33892256
D-Ribose 1-phosphate,5TMS,isomer #1C[Si](C)(C)OCC1OC(OP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)C(O[Si](C)(C)C)C1O[Si](C)(C)C2177.1Standard polar33892256
D-Ribose 1-phosphate,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OCC1OC(OP(=O)(O)O)C(O)C1O2343.6Semi standard non polar33892256
D-Ribose 1-phosphate,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OCC1OC(OP(=O)(O)O)C(O)C1O2184.0Standard non polar33892256
D-Ribose 1-phosphate,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OCC1OC(OP(=O)(O)O)C(O)C1O3535.3Standard polar33892256
D-Ribose 1-phosphate,1TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC1C(CO)OC(OP(=O)(O)O)C1O2343.0Semi standard non polar33892256
D-Ribose 1-phosphate,1TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC1C(CO)OC(OP(=O)(O)O)C1O2143.7Standard non polar33892256
D-Ribose 1-phosphate,1TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC1C(CO)OC(OP(=O)(O)O)C1O3439.6Standard polar33892256
D-Ribose 1-phosphate,2TBDMS,isomer #6CC(C)(C)[Si](C)(C)OC1C(CO)OC(OP(=O)(O)O[Si](C)(C)C(C)(C)C)C1O2532.9Semi standard non polar33892256
D-Ribose 1-phosphate,2TBDMS,isomer #6CC(C)(C)[Si](C)(C)OC1C(CO)OC(OP(=O)(O)O[Si](C)(C)C(C)(C)C)C1O2476.0Standard non polar33892256
D-Ribose 1-phosphate,2TBDMS,isomer #6CC(C)(C)[Si](C)(C)OC1C(CO)OC(OP(=O)(O)O[Si](C)(C)C(C)(C)C)C1O3002.4Standard polar33892256
D-Ribose 1-phosphate,2TBDMS,isomer #7CC(C)(C)[Si](C)(C)OP(=O)(OC1OC(CO)C(O)C1O)O[Si](C)(C)C(C)(C)C2490.7Semi standard non polar33892256
D-Ribose 1-phosphate,2TBDMS,isomer #7CC(C)(C)[Si](C)(C)OP(=O)(OC1OC(CO)C(O)C1O)O[Si](C)(C)C(C)(C)C2490.1Standard non polar33892256
D-Ribose 1-phosphate,2TBDMS,isomer #7CC(C)(C)[Si](C)(C)OP(=O)(OC1OC(CO)C(O)C1O)O[Si](C)(C)C(C)(C)C2936.4Standard polar33892256
D-Ribose 1-phosphate,3TBDMS,isomer #6CC(C)(C)[Si](C)(C)OC1C(OP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)OC(CO)C1O2718.0Semi standard non polar33892256
D-Ribose 1-phosphate,3TBDMS,isomer #6CC(C)(C)[Si](C)(C)OC1C(OP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)OC(CO)C1O2745.3Standard non polar33892256
D-Ribose 1-phosphate,3TBDMS,isomer #6CC(C)(C)[Si](C)(C)OC1C(OP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)OC(CO)C1O2801.7Standard polar33892256
D-Ribose 1-phosphate,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)OCC1OC(OP(=O)(O)O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C1O[Si](C)(C)C(C)(C)C2912.8Semi standard non polar33892256
D-Ribose 1-phosphate,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)OCC1OC(OP(=O)(O)O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C1O[Si](C)(C)C(C)(C)C2905.0Standard non polar33892256
D-Ribose 1-phosphate,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)OCC1OC(OP(=O)(O)O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C1O[Si](C)(C)C(C)(C)C2731.2Standard polar33892256
D-Ribose 1-phosphate,4TBDMS,isomer #2CC(C)(C)[Si](C)(C)OCC1OC(OP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C1O2888.0Semi standard non polar33892256
D-Ribose 1-phosphate,4TBDMS,isomer #2CC(C)(C)[Si](C)(C)OCC1OC(OP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C1O2953.7Standard non polar33892256
D-Ribose 1-phosphate,4TBDMS,isomer #2CC(C)(C)[Si](C)(C)OCC1OC(OP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C1O2726.4Standard polar33892256
D-Ribose 1-phosphate,4TBDMS,isomer #3CC(C)(C)[Si](C)(C)OCC1OC(OP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)C(O)C1O[Si](C)(C)C(C)(C)C2888.5Semi standard non polar33892256
D-Ribose 1-phosphate,4TBDMS,isomer #3CC(C)(C)[Si](C)(C)OCC1OC(OP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)C(O)C1O[Si](C)(C)C(C)(C)C2954.6Standard non polar33892256
D-Ribose 1-phosphate,4TBDMS,isomer #3CC(C)(C)[Si](C)(C)OCC1OC(OP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)C(O)C1O[Si](C)(C)C(C)(C)C2720.6Standard polar33892256
D-Ribose 1-phosphate,4TBDMS,isomer #4CC(C)(C)[Si](C)(C)OC1C(CO)OC(OP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)C1O[Si](C)(C)C(C)(C)C2874.3Semi standard non polar33892256
D-Ribose 1-phosphate,4TBDMS,isomer #4CC(C)(C)[Si](C)(C)OC1C(CO)OC(OP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)C1O[Si](C)(C)C(C)(C)C2896.6Standard non polar33892256
D-Ribose 1-phosphate,4TBDMS,isomer #4CC(C)(C)[Si](C)(C)OC1C(CO)OC(OP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)C1O[Si](C)(C)C(C)(C)C2678.8Standard polar33892256
D-Ribose 1-phosphate,5TBDMS,isomer #1CC(C)(C)[Si](C)(C)OCC1OC(OP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C1O[Si](C)(C)C(C)(C)C3050.2Semi standard non polar33892256
D-Ribose 1-phosphate,5TBDMS,isomer #1CC(C)(C)[Si](C)(C)OCC1OC(OP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C1O[Si](C)(C)C(C)(C)C3071.0Standard non polar33892256
D-Ribose 1-phosphate,5TBDMS,isomer #1CC(C)(C)[Si](C)(C)OCC1OC(OP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C1O[Si](C)(C)C(C)(C)C2683.4Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - D-Ribose 1-phosphate GC-MS (Non-derivatized) - 70eV, Positivesplash10-0002-9000000000-98736a1ab6e6257e135f2021-09-23Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - D-Ribose 1-phosphate GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - D-Ribose 1-phosphate GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - D-Ribose 1-phosphate GC-MS (TMS_1_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - D-Ribose 1-phosphate GC-MS (TMS_1_4) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - D-Ribose 1-phosphate GC-MS (TMS_2_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - D-Ribose 1-phosphate GC-MS (TMS_2_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - D-Ribose 1-phosphate GC-MS (TMS_2_6) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - D-Ribose 1-phosphate GC-MS (TMS_2_7) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - D-Ribose 1-phosphate GC-MS (TMS_3_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - D-Ribose 1-phosphate GC-MS (TMS_3_4) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - D-Ribose 1-phosphate GC-MS (TMS_3_7) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - D-Ribose 1-phosphate GC-MS (TBDMS_1_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - D-Ribose 1-phosphate GC-MS (TBDMS_1_4) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - D-Ribose 1-phosphate GC-MS (TBDMS_2_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - D-Ribose 1-phosphate GC-MS (TBDMS_2_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - D-Ribose 1-phosphate GC-MS (TBDMS_2_3) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - D-Ribose 1-phosphate GC-MS (TBDMS_2_4) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - D-Ribose 1-phosphate GC-MS (TBDMS_2_5) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - D-Ribose 1-phosphate GC-MS (TBDMS_3_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - D-Ribose 1-phosphate GC-MS (TBDMS_3_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - D-Ribose 1-phosphate GC-MS (TBDMS_3_3) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - D-Ribose 1-phosphate GC-MS (TBDMS_3_4) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - D-Ribose 1-phosphate GC-MS (TBDMS_3_5) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - D-Ribose 1-phosphate GC-MS (TBDMS_3_7) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - D-Ribose 1-phosphate 10V, Positive-QTOFsplash10-0159-0900000000-6d6c0c7544f77dfb0c412021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - D-Ribose 1-phosphate 20V, Positive-QTOFsplash10-00lr-7910000000-9441b177b385255d831b2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - D-Ribose 1-phosphate 40V, Positive-QTOFsplash10-0a4m-9000000000-a9998928687caae441902021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - D-Ribose 1-phosphate 10V, Negative-QTOFsplash10-004i-3090000000-4bb2aedb7cfc3f4c22552021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - D-Ribose 1-phosphate 20V, Negative-QTOFsplash10-004i-9000000000-e5ae44d04fcc61ba1d702021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - D-Ribose 1-phosphate 40V, Negative-QTOFsplash10-004i-9000000000-00ffef4ac2a980d6a3102021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID1045
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound1074
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]

Enzymes

Enzyme Details
1. Pyrimidine/purine nucleoside phosphorylase
General function:
Not Available
Specific function:
Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.
Gene Name:
PPNP
Uniprot ID:
A1A863
Molecular weight:
10234.335
Enzyme Details
2. Pyrimidine/purine nucleoside phosphorylase
General function:
Not Available
Specific function:
Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.
Gene Name:
PPNP
Uniprot ID:
Q186L5
Molecular weight:
11779.35
Enzyme Details
3. Purine nucleoside phosphorylase BT_4389
General function:
Not Available
Specific function:
Purine nucleoside enzyme that catalyzes the phosphorolysis of adenosine and inosine nucleosides, yielding D-ribose 1-phosphate and the respective free bases, adenine and hypoxanthine. Also catalyzes the phosphorolysis of S-methyl-5'-thioadenosine into adenine and S-methyl-5-thio-alpha-D-ribose 1-phosphate. Also has adenosine deaminase activity.
Gene Name:
(GENBANK) CONSERVED HYPOTHETICAL PROTEIN
Uniprot ID:
Q89ZI8
Molecular weight:
30118.085
Enzyme Details
4. Purine nucleoside phosphorylase SH1728
General function:
Not Available
Specific function:
Purine nucleoside enzyme that catalyzes the phosphorolysis of adenosine and inosine nucleosides, yielding D-ribose 1-phosphate and the respective free bases, adenine and hypoxanthine. Also catalyzes the phosphorolysis of S-methyl-5'-thioadenosine into adenine and S-methyl-5-thio-alpha-D-ribose 1-phosphate. Also has adenosine deaminase activity.
Gene Name:
(GENBANK) UNNAMED PROTEIN PRODUCT; SIMILAR TO UNKNOWN PROTEIN
Uniprot ID:
Q4L5N8
Molecular weight:
30426.01
Enzyme Details
5. Pyrimidine/purine nucleoside phosphorylase
General function:
Not Available
Specific function:
Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.
Gene Name:
PPNP
Uniprot ID:
Q5PFU0
Molecular weight:
10188.465
Enzyme Details
6. Purine nucleoside phosphorylase LACC1
General function:
Not Available
Specific function:
Purine nucleoside enzyme that catalyzes the phosphorolysis of adenosine, guanosine and inosine nucleosides, yielding D-ribose 1-phosphate and the respective free bases, adenine, guanine and hypoxanthine (PubMed:31978345). Also catalyzes the phosphorolysis of S-methyl-5'-thioadenosine into adenine and S-methyl-5-thio-alpha-D-ribose 1-phosphate (PubMed:31978345). Also has adenosine deaminase activity (PubMed:31978345). Acts as a regulator of innate immunity in macrophages by modulating the purine nucleotide metabolism, thereby regulating the metabolic function and bioenergetic state of macrophages (PubMed:31978345). Enables a purine nucleotide cycle between adenosine and inosine monophosphate and adenylosuccinate that prevents cytoplasmic acidification and balances the cytoplasmic-mitochondrial redox interface (PubMed:31978345). The purine nucleotide cycle consumes aspartate and releases fumarate in a manner involving fatty acid oxidation and ATP-citrate lyase activity (PubMed:31978345). Participates in pattern recognition receptor (PRR)-induced cytokines in macrophages: associates with the NOD2-signaling complex and promotes optimal NOD2-induced signaling, cytokine secretion and bacterial clearance (PubMed:28593945, PubMed:31875558). Localizes to the endoplasmic reticulum upon PRR stimulation of macrophages and associates with endoplasmic reticulum-stress sensors, promoting the endoplasmic reticulum unfolded protein response (UPR) (PubMed:31875558). Does not show laccase activity (PubMed:27959965, PubMed:31978345).
Gene Name:
LACC1
Uniprot ID:
Q8IV20
Molecular weight:
47779.575