Hmdb loader
Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 16:49:56 UTC
Update Date2021-09-26 23:12:01 UTC
HMDB IDHMDB0256399
Secondary Accession NumbersNone
Metabolite Identification
Common NamePhencyclidine
DescriptionPhencyclidine, also known as fenciclidina or PCP, belongs to the class of organic compounds known as aralkylamines. These are alkylamines in which the alkyl group is substituted at one carbon atom by an aromatic hydrocarbyl group. Phencyclidine is a primary metabolite. Primary metabolites are metabolically or physiologically essential metabolites. They are directly involved in an organism’s growth, development or reproduction. Based on a literature review a significant number of articles have been published on Phencyclidine. This compound has been identified in human blood as reported by (PMID: 31557052 ). Phencyclidine is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Phencyclidine is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
FenciclidinaChEBI
PCPChEBI
PhencyclidinumChEBI
Angel dustMeSH
SerylanMeSH
Dust, angelMeSH
Phencyclidine hydrochlorideMeSH
SernylMeSH
1-(1-Phenylcyclohexyl)piperidineMeSH
Phencyclidine hydrobromideMeSH
Chemical FormulaC17H25N
Average Molecular Weight243.3871
Monoisotopic Molecular Weight243.198699805
IUPAC Name1-(1-phenylcyclohexyl)piperidine
Traditional Nameselma
CAS Registry NumberNot Available
SMILES
C1CCN(CC1)C1(CCCCC1)C1=CC=CC=C1
InChI Identifier
InChI=1S/C17H25N/c1-4-10-16(11-5-1)17(12-6-2-7-13-17)18-14-8-3-9-15-18/h1,4-5,10-11H,2-3,6-9,12-15H2
InChI KeyJTJMJGYZQZDUJJ-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as aralkylamines. These are alkylamines in which the alkyl group is substituted at one carbon atom by an aromatic hydrocarbyl group.
KingdomOrganic compounds
Super ClassOrganic nitrogen compounds
ClassOrganonitrogen compounds
Sub ClassAmines
Direct ParentAralkylamines
Alternative Parents
Substituents
  • Aralkylamine
  • Cyclohexylamine
  • Benzenoid
  • Piperidine
  • Monocyclic benzene moiety
  • Tertiary aliphatic amine
  • Tertiary amine
  • Azacycle
  • Organoheterocyclic compound
  • Organopnictogen compound
  • Hydrocarbon derivative
  • Aromatic heteromonocyclic compound
Molecular FrameworkAromatic heteromonocyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP5.31ALOGPS
logP4.49ChemAxon
logS-4.9ALOGPS
pKa (Strongest Basic)10.64ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area3.24 ŲChemAxon
Rotatable Bond Count2ChemAxon
Refractivity77.65 m³·mol⁻¹ChemAxon
Polarizability29.66 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+162.3730932474
DeepCCS[M-H]-160.01230932474
DeepCCS[M-2H]-192.89830932474
DeepCCS[M+Na]+168.46330932474
AllCCS[M+H]+160.432859911
AllCCS[M+H-H2O]+156.732859911
AllCCS[M+NH4]+163.832859911
AllCCS[M+Na]+164.832859911
AllCCS[M-H]-166.932859911
AllCCS[M+Na-2H]-167.032859911
AllCCS[M+HCOO]-167.332859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
PhencyclidineC1CCN(CC1)C1(CCCCC1)C1=CC=CC=C12340.1Standard polar33892256
PhencyclidineC1CCN(CC1)C1(CCCCC1)C1=CC=CC=C11994.3Standard non polar33892256
PhencyclidineC1CCN(CC1)C1(CCCCC1)C1=CC=CC=C11914.1Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Experimental GC-MSGC-MS Spectrum - Phencyclidine EI-B (Non-derivatized)splash10-0uyl-9740000000-a1aa5f844f1483af1bc72017-09-12HMDB team, MONA, MassBankView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Phencyclidine GC-MS (Non-derivatized) - 70eV, Positivesplash10-00di-0920000000-67053cf44c8040a3c5102021-09-24Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Phencyclidine GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Phencyclidine 10V, Positive-QTOFsplash10-0006-0190000000-169bbbaf9329b15697032016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Phencyclidine 20V, Positive-QTOFsplash10-052f-2690000000-b23ab1907da4b999f8b72016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Phencyclidine 40V, Positive-QTOFsplash10-00kf-9840000000-cfc9c01b91cc06847aa72016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Phencyclidine 10V, Negative-QTOFsplash10-0006-0090000000-40ebbb38b0f7a643c4de2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Phencyclidine 20V, Negative-QTOFsplash10-0006-1190000000-e851147ab61218e666cf2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Phencyclidine 40V, Negative-QTOFsplash10-00ec-9630000000-71b986393f4551b0d9762016-08-03Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDDB03575
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID6224
KEGG Compound IDC07575
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkPhencyclidine
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI ID8058
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]