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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2021-09-24 06:44:01 UTC
Update Date2021-09-24 06:44:01 UTC
HMDB IDHMDB0304050
Secondary Accession NumbersNone
Metabolite Identification
Common Name2-(3'-methylthio)propylmalate
Description2-(3'-methylthio)propylmalate, also known as 2-hydroxy-2-[3-(methylsulfanyl)propyl]succinate or 2-(3-methylsulfanyl)propylmalic acid, belongs to medium-chain hydroxy acids and derivatives class of compounds. Those are hydroxy acids with a 6 to 12 carbon atoms long side chain. 2-(3'-methylthio)propylmalate is slightly soluble (in water) and a weakly acidic compound (based on its pKa). 2-(3'-methylthio)propylmalate can be found in a number of food items such as broad bean, gram bean, sesbania flower, and cherimoya, which makes 2-(3'-methylthio)propylmalate a potential biomarker for the consumption of these food products.
Structure
Thumb
Synonyms
ValueSource
2-(3-Methylsulfanyl)propylmalateChEBI
2-Hydroxy-2-[3-(methylsulfanyl)propyl]succinateChEBI
2-(3-Methylsulfanyl)propylmalic acidGenerator
2-(3-Methylsulphanyl)propylmalateGenerator
2-(3-Methylsulphanyl)propylmalic acidGenerator
2-Hydroxy-2-[3-(methylsulfanyl)propyl]succinic acidGenerator
2-Hydroxy-2-[3-(methylsulphanyl)propyl]succinateGenerator
2-Hydroxy-2-[3-(methylsulphanyl)propyl]succinic acidGenerator
2-(3-Methylthiopropyl)malic acid(2-)Generator
2-(3'-Methylthio)propylmalic acidGenerator
Chemical FormulaC8H12O5S
Average Molecular Weight220.24
Monoisotopic Molecular Weight220.04164182
IUPAC Name2-hydroxy-2-[3-(methylsulfanyl)propyl]butanedioate
Traditional Name2-(3-methylthiopropyl)malate
CAS Registry NumberNot Available
SMILES
CSCCCC(O)(CC([O-])=O)C([O-])=O
InChI Identifier
InChI=1S/C8H14O5S/c1-14-4-2-3-8(13,7(11)12)5-6(9)10/h13H,2-5H2,1H3,(H,9,10)(H,11,12)/p-2
InChI KeyWLOKFRZXOVZGIN-UHFFFAOYSA-L
Chemical Taxonomy
Description Belongs to the class of organic compounds known as medium-chain hydroxy acids and derivatives. These are hydroxy acids with a 6 to 12 carbon atoms long side chain.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassHydroxy acids and derivatives
Sub ClassMedium-chain hydroxy acids and derivatives
Direct ParentMedium-chain hydroxy acids and derivatives
Alternative Parents
Substituents
  • Medium-chain hydroxy acid
  • Medium-chain fatty acid
  • Branched fatty acid
  • Hydroxy fatty acid
  • Thia fatty acid
  • Dicarboxylic acid or derivatives
  • Fatty acyl
  • Fatty acid
  • Tertiary alcohol
  • Carboxylic acid derivative
  • Carboxylic acid
  • Dialkylthioether
  • Sulfenyl compound
  • Thioether
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Organooxygen compound
  • Organosulfur compound
  • Carbonyl group
  • Alcohol
  • Organic anion
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
Source
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP0.05ALOGPS
logP0.49ChemAxon
logS-1.9ALOGPS
pKa (Strongest Acidic)3.7ChemAxon
pKa (Strongest Basic)-4.1ChemAxon
Physiological Charge-2ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area100.49 ŲChemAxon
Rotatable Bond Count7ChemAxon
Refractivity73 m³·mol⁻¹ChemAxon
Polarizability21 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
AllCCS[M+H]+147.44332859911
AllCCS[M+H-H2O]+143.93332859911
AllCCS[M+Na]+151.63932859911
AllCCS[M+NH4]+150.70132859911
AllCCS[M-H]-143.9232859911
AllCCS[M+Na-2H]-144.88532859911
AllCCS[M+HCOO]-146.02632859911
DeepCCS[M+H]+140.15530932474
DeepCCS[M-H]-136.64930932474
DeepCCS[M-2H]-172.73930932474
DeepCCS[M+Na]+148.9730932474

Predicted Kovats Retention Indices

Not Available
Spectra
Biological Properties
Cellular LocationsNot Available
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB030309
KNApSAcK IDNot Available
Chemspider ID24785708
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI ID58817
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available