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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:38:25 UTC
Update Date2022-03-07 02:52:39 UTC
HMDB IDHMDB0030685
Secondary Accession Numbers
  • HMDB30685
Metabolite Identification
Common NameCycloheterophyllin
DescriptionCycloheterophyllin belongs to the class of organic compounds known as pyranoflavonoids. Pyranoflavonoids are compounds containing a pyran ring fused to a 2-phenyl-1,4-benzopyran skeleton. Thus, cycloheterophyllin is considered to be a flavonoid. Cycloheterophyllin has been detected, but not quantified in, fruits and jackfruits (Artocarpus heterophyllus). This could make cycloheterophyllin a potential biomarker for the consumption of these foods. Based on a literature review very few articles have been published on Cycloheterophyllin.
Structure
Data?1563862022
Synonyms
ValueSource
2,3,8-Trihydroxy-11,11-dimethyl-13-(3-methyl-2-butenyl)-6-(2-methyl-1-propenyl)-6H,7H,11H-bis[1]benzopyrano[4,3-b:6',7'-e]pyran-7-one, 9ciHMDB
Chemical FormulaC30H30O7
Average Molecular Weight502.555
Monoisotopic Molecular Weight502.199153314
IUPAC Name6,7,15-trihydroxy-19,19-dimethyl-22-(3-methylbut-2-en-1-yl)-11-(2-methylprop-1-en-1-yl)-2,10,20-trioxapentacyclo[12.8.0.0³,¹².0⁴,⁹.0¹⁶,²¹]docosa-1(14),3(12),4(9),5,7,15,17,21-octaen-13-one
Traditional Namecycloheterophyllin
CAS Registry Number36545-53-6
SMILES
CC(C)=CCC1=C2OC(C)(C)C=CC2=C(O)C2=C1OC1=C(C(OC3=C1C=C(O)C(O)=C3)C=C(C)C)C2=O
InChI Identifier
InChI=1S/C30H30O7/c1-14(2)7-8-17-27-16(9-10-30(5,6)37-27)25(33)24-26(34)23-22(11-15(3)4)35-21-13-20(32)19(31)12-18(21)29(23)36-28(17)24/h7,9-13,22,31-33H,8H2,1-6H3
InChI KeyZZPIXEJZTXAVCX-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as pyranoflavonoids. Pyranoflavonoids are compounds containing a pyran ring fused to a 2-phenyl-1,4-benzopyran skeleton.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassFlavonoids
Sub ClassPyranoflavonoids
Direct ParentPyranoflavonoids
Alternative Parents
Substituents
  • Pyranoflavonoid
  • Pyranochromene
  • 2,2-dimethyl-1-benzopyran
  • Chromone
  • Benzopyran
  • 1-benzopyran
  • 1-hydroxy-2-unsubstituted benzenoid
  • Alkyl aryl ether
  • Pyranone
  • Pyran
  • Benzenoid
  • Heteroaromatic compound
  • Vinylogous acid
  • Ether
  • Polyol
  • Oxacycle
  • Organoheterocyclic compound
  • Organic oxygen compound
  • Organooxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point205 - 206 °CNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.0036 g/LALOGPS
logP5.18ALOGPS
logP6.23ChemAxon
logS-5.1ALOGPS
pKa (Strongest Acidic)8.23ChemAxon
pKa (Strongest Basic)-4.6ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count7ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area105.45 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity144.67 m³·mol⁻¹ChemAxon
Polarizability55.48 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+219.15531661259
DarkChem[M-H]-215.91231661259
DeepCCS[M+H]+219.48730932474
DeepCCS[M-H]-217.09130932474
DeepCCS[M-2H]-249.97730932474
DeepCCS[M+Na]+225.430932474
AllCCS[M+H]+220.432859911
AllCCS[M+H-H2O]+218.332859911
AllCCS[M+NH4]+222.332859911
AllCCS[M+Na]+222.832859911
AllCCS[M-H]-212.732859911
AllCCS[M+Na-2H]-212.932859911
AllCCS[M+HCOO]-213.232859911

Predicted Retention Times

Underivatized

Chromatographic MethodRetention TimeReference
Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. Predicted by Afia on May 17, 2022.8.67 minutes32390414
Predicted by Siyang on May 30, 202217.0371 minutes33406817
Predicted by Siyang using ReTip algorithm on June 8, 20221.18 minutes32390414
AjsUoB = Accucore 150 Amide HILIC with 10mM Ammonium Formate, 0.1% Formic Acid31.5 seconds40023050
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid3698.9 seconds40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid297.3 seconds40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid232.6 seconds40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid159.4 seconds40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid144.4 seconds40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid801.9 seconds40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid708.6 seconds40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)78.4 seconds40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid1497.1 seconds40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid706.5 seconds40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid1493.8 seconds40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid541.4 seconds40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid480.4 seconds40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate161.7 seconds40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA301.0 seconds40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water8.9 seconds40023050

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
CycloheterophyllinCC(C)=CCC1=C2OC(C)(C)C=CC2=C(O)C2=C1OC1=C(C(OC3=C1C=C(O)C(O)=C3)C=C(C)C)C2=O5525.5Standard polar33892256
CycloheterophyllinCC(C)=CCC1=C2OC(C)(C)C=CC2=C(O)C2=C1OC1=C(C(OC3=C1C=C(O)C(O)=C3)C=C(C)C)C2=O4284.7Standard non polar33892256
CycloheterophyllinCC(C)=CCC1=C2OC(C)(C)C=CC2=C(O)C2=C1OC1=C(C(OC3=C1C=C(O)C(O)=C3)C=C(C)C)C2=O4137.3Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Cycloheterophyllin,1TMS,isomer #1CC(C)=CCC1=C2OC(C)(C)C=CC2=C(O[Si](C)(C)C)C2=C1OC1=C(C2=O)C(C=C(C)C)OC2=CC(O)=C(O)C=C213931.7Semi standard non polar33892256
Cycloheterophyllin,1TMS,isomer #2CC(C)=CCC1=C2OC(C)(C)C=CC2=C(O)C2=C1OC1=C(C2=O)C(C=C(C)C)OC2=CC(O)=C(O[Si](C)(C)C)C=C213938.6Semi standard non polar33892256
Cycloheterophyllin,1TMS,isomer #3CC(C)=CCC1=C2OC(C)(C)C=CC2=C(O)C2=C1OC1=C(C2=O)C(C=C(C)C)OC2=CC(O[Si](C)(C)C)=C(O)C=C213952.8Semi standard non polar33892256
Cycloheterophyllin,2TMS,isomer #1CC(C)=CCC1=C2OC(C)(C)C=CC2=C(O[Si](C)(C)C)C2=C1OC1=C(C2=O)C(C=C(C)C)OC2=CC(O)=C(O[Si](C)(C)C)C=C213832.5Semi standard non polar33892256
Cycloheterophyllin,2TMS,isomer #2CC(C)=CCC1=C2OC(C)(C)C=CC2=C(O[Si](C)(C)C)C2=C1OC1=C(C2=O)C(C=C(C)C)OC2=CC(O[Si](C)(C)C)=C(O)C=C213852.6Semi standard non polar33892256
Cycloheterophyllin,2TMS,isomer #3CC(C)=CCC1=C2OC(C)(C)C=CC2=C(O)C2=C1OC1=C(C2=O)C(C=C(C)C)OC2=CC(O[Si](C)(C)C)=C(O[Si](C)(C)C)C=C213875.9Semi standard non polar33892256
Cycloheterophyllin,3TMS,isomer #1CC(C)=CCC1=C2OC(C)(C)C=CC2=C(O[Si](C)(C)C)C2=C1OC1=C(C2=O)C(C=C(C)C)OC2=CC(O[Si](C)(C)C)=C(O[Si](C)(C)C)C=C213804.9Semi standard non polar33892256
Cycloheterophyllin,1TBDMS,isomer #1CC(C)=CCC1=C2OC(C)(C)C=CC2=C(O[Si](C)(C)C(C)(C)C)C2=C1OC1=C(C2=O)C(C=C(C)C)OC2=CC(O)=C(O)C=C214165.2Semi standard non polar33892256
Cycloheterophyllin,1TBDMS,isomer #2CC(C)=CCC1=C2OC(C)(C)C=CC2=C(O)C2=C1OC1=C(C2=O)C(C=C(C)C)OC2=CC(O)=C(O[Si](C)(C)C(C)(C)C)C=C214173.8Semi standard non polar33892256
Cycloheterophyllin,1TBDMS,isomer #3CC(C)=CCC1=C2OC(C)(C)C=CC2=C(O)C2=C1OC1=C(C2=O)C(C=C(C)C)OC2=CC(O[Si](C)(C)C(C)(C)C)=C(O)C=C214189.8Semi standard non polar33892256
Cycloheterophyllin,2TBDMS,isomer #1CC(C)=CCC1=C2OC(C)(C)C=CC2=C(O[Si](C)(C)C(C)(C)C)C2=C1OC1=C(C2=O)C(C=C(C)C)OC2=CC(O)=C(O[Si](C)(C)C(C)(C)C)C=C214230.7Semi standard non polar33892256
Cycloheterophyllin,2TBDMS,isomer #2CC(C)=CCC1=C2OC(C)(C)C=CC2=C(O[Si](C)(C)C(C)(C)C)C2=C1OC1=C(C2=O)C(C=C(C)C)OC2=CC(O[Si](C)(C)C(C)(C)C)=C(O)C=C214249.7Semi standard non polar33892256
Cycloheterophyllin,2TBDMS,isomer #3CC(C)=CCC1=C2OC(C)(C)C=CC2=C(O)C2=C1OC1=C(C2=O)C(C=C(C)C)OC2=CC(O[Si](C)(C)C(C)(C)C)=C(O[Si](C)(C)C(C)(C)C)C=C214280.0Semi standard non polar33892256
Cycloheterophyllin,3TBDMS,isomer #1CC(C)=CCC1=C2OC(C)(C)C=CC2=C(O[Si](C)(C)C(C)(C)C)C2=C1OC1=C(C2=O)C(C=C(C)C)OC2=CC(O[Si](C)(C)C(C)(C)C)=C(O[Si](C)(C)C(C)(C)C)C=C214346.1Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Cycloheterophyllin GC-MS (Non-derivatized) - 70eV, Positivesplash10-000i-1210900000-2b9348571f9c2ede2c212017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Cycloheterophyllin GC-MS (2 TMS) - 70eV, Positivesplash10-001i-2100029000-1a10b698dc6f89f727b52017-10-06Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cycloheterophyllin 10V, Positive-QTOFsplash10-0udi-1301890000-3a9668040559528c86dc2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cycloheterophyllin 20V, Positive-QTOFsplash10-07bb-3103910000-3e34e7b9d27e80266f152016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cycloheterophyllin 40V, Positive-QTOFsplash10-0pxr-9501100000-7f051663aa9661ab06112016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cycloheterophyllin 10V, Negative-QTOFsplash10-0udi-0000190000-684986bbcc1af6b7bb2b2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cycloheterophyllin 20V, Negative-QTOFsplash10-0udi-1002960000-ab6c73fca49f7aae21e82016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cycloheterophyllin 40V, Negative-QTOFsplash10-0apj-1445900000-e6a2476407cfa534cc222016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cycloheterophyllin 10V, Negative-QTOFsplash10-0udi-0000090000-27a32bd6c97a965edc442021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cycloheterophyllin 20V, Negative-QTOFsplash10-0udi-0000090000-27a32bd6c97a965edc442021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cycloheterophyllin 40V, Negative-QTOFsplash10-0a4r-0090010000-7e9d5fac0bdd16aa06132021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cycloheterophyllin 10V, Positive-QTOFsplash10-0udi-0000090000-db49500cd3a1fa6367862021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cycloheterophyllin 20V, Positive-QTOFsplash10-0udi-0000090000-db49500cd3a1fa6367862021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cycloheterophyllin 40V, Positive-QTOFsplash10-0f79-0090250000-7dd066fbdb79c38212a82021-09-22Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB002604
KNApSAcK IDC00004064
Chemspider ID4475345
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound5316250
PDB IDNot Available
ChEBI ID563917
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Lin CN, Lu CM, Lin HC, Fang SC, Shieh BJ, Hsu MF, Wang JP, Ko FN, Teng CM: Novel antiplatelet constituents from formosan moraceous plants. J Nat Prod. 1996 Sep;59(9):834-8. [PubMed:8864236 ]
  2. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .

Enzymes

General function:
Involved in transferase activity, transferring hexosyl groups
Specific function:
UDPGT is of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds. This isoform glucuronidates bilirubin IX-alpha to form both the IX-alpha-C8 and IX-alpha-C12 monoconjugates and diconjugate. Is also able to catalyze the glucuronidation of 17beta-estradiol, 17alpha-ethinylestradiol, 1-hydroxypyrene, 4-methylumbelliferone, 1-naphthol, paranitrophenol, scopoletin, and umbelliferone.
Gene Name:
UGT1A1
Uniprot ID:
P22309
Molecular weight:
59590.91
Reactions
Cycloheterophyllin → 6-{[6,15-dihydroxy-19,19-dimethyl-22-(3-methylbut-2-en-1-yl)-11-(2-methylprop-1-en-1-yl)-13-oxo-2,10,20-trioxapentacyclo[12.8.0.0³,¹².0⁴,⁹.0¹⁶,²¹]docosa-1(14),3(12),4,6,8,15,17,21-octaen-7-yl]oxy}-3,4,5-trihydroxyoxane-2-carboxylic aciddetails
Cycloheterophyllin → 6-{[7,15-dihydroxy-19,19-dimethyl-22-(3-methylbut-2-en-1-yl)-11-(2-methylprop-1-en-1-yl)-13-oxo-2,10,20-trioxapentacyclo[12.8.0.0³,¹².0⁴,⁹.0¹⁶,²¹]docosa-1(14),3(12),4,6,8,15,17,21-octaen-6-yl]oxy}-3,4,5-trihydroxyoxane-2-carboxylic aciddetails
Cycloheterophyllin → 6-{[6,7-dihydroxy-19,19-dimethyl-22-(3-methylbut-2-en-1-yl)-11-(2-methylprop-1-en-1-yl)-13-oxo-2,10,20-trioxapentacyclo[12.8.0.0³,¹².0⁴,⁹.0¹⁶,²¹]docosa-1(14),3(12),4(9),5,7,15,17,21-octaen-15-yl]oxy}-3,4,5-trihydroxyoxane-2-carboxylic aciddetails