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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:44:58 UTC
Update Date2023-02-21 17:21:13 UTC
HMDB IDHMDB0031709
Secondary Accession Numbers
  • HMDB31709
Metabolite Identification
Common Name1,6-Hexanedithiol
Description1,6-Hexanedithiol belongs to the class of organic compounds known as alkylthiols. These are organic compounds containing the thiol functional group linked to an alkyl chain. 1,6-Hexanedithiol is a burnt, fatty, and meaty tasting compound. Based on a literature review a significant number of articles have been published on 1,6-Hexanedithiol.
Structure
Data?1677000073
Synonyms
ValueSource
1, 6-HexanedimercaptanHMDB
1,6-DimercaptohexaneHMDB
1,6-HexamethylenedithiolHMDB
1,6-HexanedimercaptanHMDB
FEMA 3495HMDB
HexamethylendithiolHMDB
Hexamethylene dimercaptanHMDB
Hexane-1,6-dithiolHMDB, MeSH
Hexanedithiol-(1,6)HMDB
1,6-HexanedithiolMeSH
Chemical FormulaC6H14S2
Average Molecular Weight150.305
Monoisotopic Molecular Weight150.053691828
IUPAC Namehexane-1,6-dithiol
Traditional Namehexane-1,6-dithiol
CAS Registry Number1191-43-1
SMILES
SCCCCCCS
InChI Identifier
InChI=1S/C6H14S2/c7-5-3-1-2-4-6-8/h7-8H,1-6H2
InChI KeySRZXCOWFGPICGA-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as alkylthiols. These are organic compounds containing the thiol functional group linked to an alkyl chain.
KingdomOrganic compounds
Super ClassOrganosulfur compounds
ClassThiols
Sub ClassAlkylthiols
Direct ParentAlkylthiols
Alternative Parents
Substituents
  • Alkylthiol
  • Hydrocarbon derivative
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Ontology
Physiological effect
Disposition
ProcessNot Available
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting Point-21.00 °C. @ 760.00 mm HgThe Good Scents Company Information System
Boiling Point118.00 to 119.00 °C. @ 15.00 mm HgThe Good Scents Company Information System
Water Solubility146.9 mg/L @ 25 °C (est)The Good Scents Company Information System
LogP3.195 (est)The Good Scents Company Information System
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.079 g/LALOGPS
logP2.53ALOGPS
logP2.76ChemAxon
logS-3.3ALOGPS
pKa (Strongest Acidic)9.9ChemAxon
pKa (Strongest Basic)-9.6ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count0ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area0 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity45.32 m³·mol⁻¹ChemAxon
Polarizability18.55 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+132.43331661259
DarkChem[M-H]-128.82631661259
DeepCCS[M+H]+139.41830932474
DeepCCS[M-H]-137.16230932474
DeepCCS[M-2H]-172.88130932474
DeepCCS[M+Na]+147.79430932474
AllCCS[M+H]+132.632859911
AllCCS[M+H-H2O]+128.732859911
AllCCS[M+NH4]+136.232859911
AllCCS[M+Na]+137.232859911
AllCCS[M-H]-144.532859911
AllCCS[M+Na-2H]-147.932859911
AllCCS[M+HCOO]-151.632859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
1,6-HexanedithiolSCCCCCCS1767.3Standard polar33892256
1,6-HexanedithiolSCCCCCCS1237.4Standard non polar33892256
1,6-HexanedithiolSCCCCCCS1255.9Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
1,6-Hexanedithiol,1TMS,isomer #1C[Si](C)(C)SCCCCCCS1476.6Semi standard non polar33892256
1,6-Hexanedithiol,1TMS,isomer #1C[Si](C)(C)SCCCCCCS1462.6Standard non polar33892256
1,6-Hexanedithiol,2TMS,isomer #1C[Si](C)(C)SCCCCCCS[Si](C)(C)C1698.1Semi standard non polar33892256
1,6-Hexanedithiol,2TMS,isomer #1C[Si](C)(C)SCCCCCCS[Si](C)(C)C1749.0Standard non polar33892256
1,6-Hexanedithiol,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)SCCCCCCS1739.7Semi standard non polar33892256
1,6-Hexanedithiol,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)SCCCCCCS1675.1Standard non polar33892256
1,6-Hexanedithiol,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)SCCCCCCS[Si](C)(C)C(C)(C)C2177.2Semi standard non polar33892256
1,6-Hexanedithiol,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)SCCCCCCS[Si](C)(C)C(C)(C)C2164.6Standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 1,6-Hexanedithiol GC-MS (Non-derivatized) - 70eV, Positivesplash10-0ug1-9300000000-b6bae81c64e08d11791a2017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 1,6-Hexanedithiol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1,6-Hexanedithiol 10V, Positive-QTOFsplash10-0udi-0900000000-72d6e6970fdf5efad6182016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1,6-Hexanedithiol 20V, Positive-QTOFsplash10-0udi-2900000000-7d3d286daac37947b5e32016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1,6-Hexanedithiol 40V, Positive-QTOFsplash10-07ef-9000000000-34a76a3111683db7e7f92016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1,6-Hexanedithiol 10V, Negative-QTOFsplash10-0002-1900000000-b3666c80356f64065b5e2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1,6-Hexanedithiol 20V, Negative-QTOFsplash10-0002-2900000000-8438380dc173d58bbba92016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1,6-Hexanedithiol 40V, Negative-QTOFsplash10-001i-9000000000-b61d6babef229352d2902016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1,6-Hexanedithiol 10V, Positive-QTOFsplash10-014i-7900000000-8bcc68930840babd6a962021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1,6-Hexanedithiol 20V, Positive-QTOFsplash10-0a59-9000000000-b1de60e5da1dcf0fb5942021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1,6-Hexanedithiol 40V, Positive-QTOFsplash10-06tg-9000000000-4761efb98451f1cd26342021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1,6-Hexanedithiol 10V, Negative-QTOFsplash10-0002-0900000000-9ca8fee6e1d1c60448172021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1,6-Hexanedithiol 20V, Negative-QTOFsplash10-0002-0900000000-ed614c8b123d13bdd3f62021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1,6-Hexanedithiol 40V, Negative-QTOFsplash10-000t-9600000000-ada43d8294c38cb90d0c2021-09-24Wishart LabView Spectrum

IR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M-H]-)2023-02-04FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+H]+)2023-02-04FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+)2023-02-04FELIX labView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB008372
KNApSAcK IDNot Available
Chemspider ID13836
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound14491
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1036511
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .