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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:50:04 UTC
Update Date2023-02-21 17:22:14 UTC
HMDB IDHMDB0032489
Secondary Accession Numbers
  • HMDB32489
Metabolite Identification
Common NamePrenyl caproate
DescriptionPrenyl caproate belongs to the class of organic compounds known as fatty acid esters. These are carboxylic ester derivatives of a fatty acid. Based on a literature review a small amount of articles have been published on Prenyl caproate.
Structure
Data?1677000134
Synonyms
ValueSource
Prenyl caproic acidGenerator
3-Methyl-2-butenyl hexanoateHMDB
3-Methylbut-2-enyl hexanoateHMDB
Hexanoic acid, 3-methyl-2-buten-1-yl esterHMDB
Hexanoic acid, 3-methyl-2-butenyl esterHMDB
Hexanoic acid, 3-methylbut-2-enyl esterHMDB
Hydrocortisone caproateHMDB
Prenyl hexanoateHMDB
3-Methylbut-2-en-1-yl hexanoic acidGenerator
Chemical FormulaC11H20O2
Average Molecular Weight184.2753
Monoisotopic Molecular Weight184.146329884
IUPAC Name3-methylbut-2-en-1-yl hexanoate
Traditional Name3-methylbut-2-en-1-yl hexanoate
CAS Registry Number76649-22-4
SMILES
CCCCCC(=O)OCC=C(C)C
InChI Identifier
InChI=1S/C11H20O2/c1-4-5-6-7-11(12)13-9-8-10(2)3/h8H,4-7,9H2,1-3H3
InChI KeyMUVXQQVJNUBWPF-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as fatty acid esters. These are carboxylic ester derivatives of a fatty acid.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassFatty Acyls
Sub ClassFatty acid esters
Direct ParentFatty acid esters
Alternative Parents
Substituents
  • Fatty acid ester
  • Carboxylic acid ester
  • Monocarboxylic acid or derivatives
  • Carboxylic acid derivative
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Carbonyl group
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Ontology
Physiological effect
Disposition
Process
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.32 g/LALOGPS
logP3.96ALOGPS
logP3.32ChemAxon
logS-2.8ALOGPS
pKa (Strongest Basic)-7ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area26.3 ŲChemAxon
Rotatable Bond Count7ChemAxon
Refractivity54.96 m³·mol⁻¹ChemAxon
Polarizability22.73 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+147.19731661259
DarkChem[M-H]-144.02231661259
DeepCCS[M+H]+148.70430932474
DeepCCS[M-H]-144.93930932474
DeepCCS[M-2H]-182.51630932474
DeepCCS[M+Na]+158.12830932474
AllCCS[M+H]+147.332859911
AllCCS[M+H-H2O]+143.632859911
AllCCS[M+NH4]+150.732859911
AllCCS[M+Na]+151.632859911
AllCCS[M-H]-148.132859911
AllCCS[M+Na-2H]-149.832859911
AllCCS[M+HCOO]-151.732859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Prenyl caproateCCCCCC(=O)OCC=C(C)C1580.4Standard polar33892256
Prenyl caproateCCCCCC(=O)OCC=C(C)C1245.3Standard non polar33892256
Prenyl caproateCCCCCC(=O)OCC=C(C)C1323.2Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Prenyl caproate GC-MS (Non-derivatized) - 70eV, Positivesplash10-014l-9100000000-24a0b7a0742118fae0612017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Prenyl caproate GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Prenyl caproate 10V, Positive-QTOFsplash10-00kr-9800000000-b9ceadbe94d10de822262016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Prenyl caproate 20V, Positive-QTOFsplash10-014i-9000000000-06ae9ae030b309cba7262016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Prenyl caproate 40V, Positive-QTOFsplash10-0pvl-9000000000-e69db764dee33bb5aaa62016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Prenyl caproate 10V, Negative-QTOFsplash10-00ls-7900000000-4bdab3a24e832deb4c5b2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Prenyl caproate 20V, Negative-QTOFsplash10-014j-9700000000-31981a8d2640dbcda0622016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Prenyl caproate 40V, Negative-QTOFsplash10-066v-9100000000-e83748e22edfc5dff59a2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Prenyl caproate 10V, Negative-QTOFsplash10-000b-9100000000-1eaf4278aa4b230b04af2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Prenyl caproate 20V, Negative-QTOFsplash10-00kb-9500000000-0afef15bf90463023f4e2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Prenyl caproate 40V, Negative-QTOFsplash10-0002-9000000000-eddac76d27ed9b9c69692021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Prenyl caproate 10V, Positive-QTOFsplash10-014i-9200000000-ae462bd942fd78f015d32021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Prenyl caproate 20V, Positive-QTOFsplash10-014i-9000000000-d26eb50638f84aa200eb2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Prenyl caproate 40V, Positive-QTOFsplash10-0006-9000000000-696ca0e4326cae217df22021-09-24Wishart LabView Spectrum

IR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+H]+)2023-02-04FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+)2023-02-04FELIX labView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB010135
KNApSAcK IDNot Available
Chemspider ID151463
KEGG Compound IDC13422
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound173534
PDB IDNot Available
ChEBI ID31676
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). EAFUS: Everything Added to Food in the United States.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.