| Record Information |
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| Version | 5.0 |
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| Status | Expected but not Quantified |
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| Creation Date | 2012-09-11 17:51:36 UTC |
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| Update Date | 2023-02-21 17:22:38 UTC |
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| HMDB ID | HMDB0032755 |
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| Secondary Accession Numbers | |
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| Metabolite Identification |
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| Common Name | Methyl 1-methoxy-1H-indole-3-carboxylate |
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| Description | Methyl 1-methoxy-1H-indole-3-carboxylate, also known as phytoalexins, belongs to the class of organic compounds known as indolecarboxylic acids and derivatives. Indolecarboxylic acids and derivatives are compounds containing a carboxylic acid group (or a derivative thereof) linked to an indole. Methyl 1-methoxy-1H-indole-3-carboxylate has been detected, but not quantified in, herbs and spices. This could make methyl 1-methoxy-1H-indole-3-carboxylate a potential biomarker for the consumption of these foods. Based on a literature review very few articles have been published on Methyl 1-methoxy-1H-indole-3-carboxylate. |
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| Structure | CON1C=C(C(=O)OC)C2=CC=CC=C12 InChI=1S/C11H11NO3/c1-14-11(13)9-7-12(15-2)10-6-4-3-5-8(9)10/h3-7H,1-2H3 |
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| Synonyms | | Value | Source |
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| Methyl 1-methoxy-1H-indole-3-carboxylic acid | Generator | | Phytoalexins | HMDB |
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| Chemical Formula | C11H11NO3 |
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| Average Molecular Weight | 205.2099 |
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| Monoisotopic Molecular Weight | 205.073893223 |
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| IUPAC Name | methyl 1-methoxy-1H-indole-3-carboxylate |
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| Traditional Name | methyl 1-methoxyindole-3-carboxylate |
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| CAS Registry Number | 18377-50-9 |
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| SMILES | CON1C=C(C(=O)OC)C2=CC=CC=C12 |
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| InChI Identifier | InChI=1S/C11H11NO3/c1-14-11(13)9-7-12(15-2)10-6-4-3-5-8(9)10/h3-7H,1-2H3 |
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| InChI Key | JAAYVMHPQAMBJS-UHFFFAOYSA-N |
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| Chemical Taxonomy |
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| Description | Belongs to the class of organic compounds known as indolecarboxylic acids and derivatives. Indolecarboxylic acids and derivatives are compounds containing a carboxylic acid group (or a derivative thereof) linked to an indole. |
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| Kingdom | Organic compounds |
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| Super Class | Organoheterocyclic compounds |
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| Class | Indoles and derivatives |
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| Sub Class | Indolecarboxylic acids and derivatives |
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| Direct Parent | Indolecarboxylic acids and derivatives |
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| Alternative Parents | |
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| Substituents | - Indolecarboxylic acid derivative
- Indole
- Pyrrole-3-carboxylic acid or derivatives
- Substituted pyrrole
- Benzenoid
- Pyrrole
- Methyl ester
- Vinylogous amide
- Heteroaromatic compound
- Carboxylic acid ester
- Carboxylic acid derivative
- Monocarboxylic acid or derivatives
- Azacycle
- Organic oxide
- Organopnictogen compound
- Organooxygen compound
- Organonitrogen compound
- Organic oxygen compound
- Hydrocarbon derivative
- Organic nitrogen compound
- Aromatic heteropolycyclic compound
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| Molecular Framework | Aromatic heteropolycyclic compounds |
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| External Descriptors | Not Available |
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| Ontology |
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| Physiological effect | Not Available |
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| Disposition | |
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| Process | Not Available |
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| Role | |
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| Physical Properties |
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| State | Solid |
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| Experimental Molecular Properties | |
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| Experimental Chromatographic Properties | Not Available |
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| Predicted Molecular Properties | |
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| Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Retention Times Underivatized| Chromatographic Method | Retention Time | Reference |
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| Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. Predicted by Afia on May 17, 2022. | 5.36 minutes | 32390414 | | Predicted by Siyang on May 30, 2022 | 14.8858 minutes | 33406817 | | Predicted by Siyang using ReTip algorithm on June 8, 2022 | 1.28 minutes | 32390414 | | Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid | 2300.2 seconds | 40023050 | | Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid | 498.5 seconds | 40023050 | | Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid | 184.7 seconds | 40023050 | | Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid | 311.1 seconds | 40023050 | | RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 175.8 seconds | 40023050 | | Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid | 573.2 seconds | 40023050 | | BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid | 682.3 seconds | 40023050 | | HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate) | 90.3 seconds | 40023050 | | UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid | 1221.9 seconds | 40023050 | | BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid | 451.4 seconds | 40023050 | | UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid | 1331.7 seconds | 40023050 | | SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 374.7 seconds | 40023050 | | RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 399.9 seconds | 40023050 | | MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate | 442.1 seconds | 40023050 | | KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA | 394.7 seconds | 40023050 | | Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water | 61.8 seconds | 40023050 |
Predicted Kovats Retention IndicesUnderivatized |
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| GC-MS Spectra| Spectrum Type | Description | Splash Key | Deposition Date | Source | View |
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| Predicted GC-MS | Predicted GC-MS Spectrum - Methyl 1-methoxy-1H-indole-3-carboxylate GC-MS (Non-derivatized) - 70eV, Positive | splash10-0095-1900000000-8cfd3846154530d5b9a7 | 2017-09-01 | Wishart Lab | View Spectrum | | Predicted GC-MS | Predicted GC-MS Spectrum - Methyl 1-methoxy-1H-indole-3-carboxylate GC-MS (Non-derivatized) - 70eV, Positive | Not Available | 2021-10-12 | Wishart Lab | View Spectrum |
MS/MS Spectra| Spectrum Type | Description | Splash Key | Deposition Date | Source | View |
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| Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Methyl 1-methoxy-1H-indole-3-carboxylate 10V, Positive-QTOF | splash10-0a4i-0090000000-61fc39151a32b107e2ae | 2016-08-03 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Methyl 1-methoxy-1H-indole-3-carboxylate 20V, Positive-QTOF | splash10-0a4i-0490000000-5bca0ac14fb28c9be013 | 2016-08-03 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Methyl 1-methoxy-1H-indole-3-carboxylate 40V, Positive-QTOF | splash10-0096-0900000000-38f9d5ebc26ae03fb775 | 2016-08-03 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Methyl 1-methoxy-1H-indole-3-carboxylate 10V, Negative-QTOF | splash10-0udi-0290000000-98bf18bd9baeea49f4e5 | 2016-08-03 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Methyl 1-methoxy-1H-indole-3-carboxylate 20V, Negative-QTOF | splash10-00di-0920000000-2fdf9aca0b0cfa66ea43 | 2016-08-03 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Methyl 1-methoxy-1H-indole-3-carboxylate 40V, Negative-QTOF | splash10-00bc-6900000000-d65fdf8f5289eed3261f | 2016-08-03 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Methyl 1-methoxy-1H-indole-3-carboxylate 10V, Positive-QTOF | splash10-05fr-0980000000-127b72000982a957381a | 2021-09-22 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Methyl 1-methoxy-1H-indole-3-carboxylate 20V, Positive-QTOF | splash10-05fu-0930000000-d1d8aa36d2510b3c34ff | 2021-09-22 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Methyl 1-methoxy-1H-indole-3-carboxylate 40V, Positive-QTOF | splash10-0f6y-1900000000-8f6333600471498206e2 | 2021-09-22 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Methyl 1-methoxy-1H-indole-3-carboxylate 10V, Negative-QTOF | splash10-0udi-0090000000-fb252b861176302082ca | 2021-09-22 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Methyl 1-methoxy-1H-indole-3-carboxylate 20V, Negative-QTOF | splash10-00kb-0910000000-20e18aa9951d1d720386 | 2021-09-22 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Methyl 1-methoxy-1H-indole-3-carboxylate 40V, Negative-QTOF | splash10-014i-0900000000-65319e1adbe481146b40 | 2021-09-22 | Wishart Lab | View Spectrum |
IR Spectra| Spectrum Type | Description | Deposition Date | Source | View |
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| Predicted IR Spectrum | IR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+H]+) | 2023-02-04 | FELIX lab | View Spectrum | | Predicted IR Spectrum | IR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+) | 2023-02-04 | FELIX lab | View Spectrum |
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