| Record Information |
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| Version | 5.0 |
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| Status | Expected but not Quantified |
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| Creation Date | 2012-09-11 18:44:35 UTC |
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| Update Date | 2023-02-21 17:23:50 UTC |
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| HMDB ID | HMDB0033969 |
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| Secondary Accession Numbers | |
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| Metabolite Identification |
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| Common Name | Benzyl isothiocyanate |
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| Description | Benzyl isothiocyanate, also known as benzylsenfoel or a-isothiocyanatotoluene, belongs to the class of organic compounds known as benzene and substituted derivatives. These are aromatic compounds containing one monocyclic ring system consisting of benzene. Benzyl isothiocyanate has been detected, but not quantified in, garden cresses (Lepidium sativum) and horseradishes (Armoracia rusticana). This could make benzyl isothiocyanate a potential biomarker for the consumption of these foods. Based on a literature review a significant number of articles have been published on Benzyl isothiocyanate. |
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| Structure | InChI=1S/C8H7NS/c10-7-9-6-8-4-2-1-3-5-8/h1-5H,6H2 |
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| Synonyms | | Value | Source |
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| alpha-Isothiocyanatotoluene | ChEBI | | Benzylsenfoel | ChEBI | | Isothiocyanic acid, benzyl ester | ChEBI | | a-Isothiocyanatotoluene | Generator | | Α-isothiocyanatotoluene | Generator | | Isothiocyanate, benzyl ester | Generator | | Benzyl isothiocyanic acid | Generator | | (Isothiocyanatomethyl)-benzene | HMDB | | (Isothiocyanatomethyl)benzene | HMDB | | (Isothiocyanatomethyl)benzene, 9ci | HMDB | | AB 2 | HMDB | | alpha-Isothiocyanato-toluene | HMDB | | Benzyl isothio cyanate | HMDB | | Benzyl mustard oil | HMDB | | Benzyl-isothiocyanate | HMDB | | Benzylisothiocyanate | HMDB | | Isothiocyanato-methyl-benzene | HMDB | | Isothiocyanic acid benzyl ester | HMDB | | Isothiocyanotaomethylbenzene | HMDB | | Phenylmethyl isothiocyanate | HMDB | | Pmitc CPD | HMDB | | Tromacaps | HMDB | | Tromalyt | HMDB | | Tromalyt active substance | HMDB | | Tromocaps | HMDB | | Urogran | HMDB | | 3-Benzylisothiocyanic acid | HMDB |
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| Chemical Formula | C8H7NS |
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| Average Molecular Weight | 149.213 |
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| Monoisotopic Molecular Weight | 149.029919919 |
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| IUPAC Name | (isothiocyanatomethyl)benzene |
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| Traditional Name | benzyl isothiocyanate |
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| CAS Registry Number | 622-78-6 |
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| SMILES | S=C=NCC1=CC=CC=C1 |
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| InChI Identifier | InChI=1S/C8H7NS/c10-7-9-6-8-4-2-1-3-5-8/h1-5H,6H2 |
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| InChI Key | MDKCFLQDBWCQCV-UHFFFAOYSA-N |
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| Chemical Taxonomy |
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| Description | Belongs to the class of organic compounds known as benzene and substituted derivatives. These are aromatic compounds containing one monocyclic ring system consisting of benzene. |
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| Kingdom | Organic compounds |
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| Super Class | Benzenoids |
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| Class | Benzene and substituted derivatives |
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| Sub Class | Not Available |
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| Direct Parent | Benzene and substituted derivatives |
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| Alternative Parents | |
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| Substituents | - Monocyclic benzene moiety
- Isothiocyanate
- Organic 1,3-dipolar compound
- Propargyl-type 1,3-dipolar organic compound
- Organic nitrogen compound
- Organopnictogen compound
- Hydrocarbon derivative
- Organosulfur compound
- Organonitrogen compound
- Aromatic homomonocyclic compound
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| Molecular Framework | Aromatic homomonocyclic compounds |
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| External Descriptors | |
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| Ontology |
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| Physiological effect | |
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| Disposition | |
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| Process | Not Available |
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| Role | |
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| Physical Properties |
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| State | Solid |
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| Experimental Molecular Properties | | Property | Value | Reference |
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| Melting Point | 41 °C | Not Available | | Boiling Point | 242.00 to 243.00 °C. @ 760.00 mm Hg | The Good Scents Company Information System | | Water Solubility | 0.11 mg/mL at 25 °C | Not Available | | LogP | 3.16 | Not Available |
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| Experimental Chromatographic Properties | Not Available |
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| Predicted Molecular Properties | |
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| Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Retention Times Underivatized| Chromatographic Method | Retention Time | Reference |
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| Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. Predicted by Afia on May 17, 2022. | 4.8 minutes | 32390414 | | Predicted by Siyang on May 30, 2022 | 12.3599 minutes | 33406817 | | Predicted by Siyang using ReTip algorithm on June 8, 2022 | 3.43 minutes | 32390414 | | Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid | 1808.3 seconds | 40023050 | | Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid | 493.6 seconds | 40023050 | | Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid | 191.1 seconds | 40023050 | | Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid | 328.0 seconds | 40023050 | | RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 129.9 seconds | 40023050 | | Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid | 509.2 seconds | 40023050 | | BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid | 630.2 seconds | 40023050 | | HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate) | 236.1 seconds | 40023050 | | UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid | 1162.0 seconds | 40023050 | | BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid | 428.2 seconds | 40023050 | | UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid | 1161.0 seconds | 40023050 | | SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 333.5 seconds | 40023050 | | RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 373.5 seconds | 40023050 | | MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate | 538.5 seconds | 40023050 | | KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA | 357.7 seconds | 40023050 | | Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water | 89.7 seconds | 40023050 |
Predicted Kovats Retention IndicesUnderivatized |
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| GC-MS Spectra| Spectrum Type | Description | Splash Key | Deposition Date | Source | View |
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| Predicted GC-MS | Predicted GC-MS Spectrum - Benzyl isothiocyanate GC-MS (Non-derivatized) - 70eV, Positive | splash10-0006-9100000000-29b203aa3cc9f04c2fda | 2017-07-27 | Wishart Lab | View Spectrum | | Predicted GC-MS | Predicted GC-MS Spectrum - Benzyl isothiocyanate GC-MS (Non-derivatized) - 70eV, Positive | Not Available | 2021-10-12 | Wishart Lab | View Spectrum | | Predicted GC-MS | Predicted GC-MS Spectrum - Benzyl isothiocyanate GC-MS (Non-derivatized) - 70eV, Positive | Not Available | 2021-10-12 | Wishart Lab | View Spectrum |
MS/MS Spectra| Spectrum Type | Description | Splash Key | Deposition Date | Source | View |
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| Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Benzyl isothiocyanate 10V, Positive-QTOF | splash10-0udi-0900000000-c83b146c4b125e3d9b83 | 2015-04-24 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Benzyl isothiocyanate 20V, Positive-QTOF | splash10-0udi-0900000000-e7980a61941ab132ea80 | 2015-04-24 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Benzyl isothiocyanate 40V, Positive-QTOF | splash10-0udi-5900000000-33afb787a500e9b4e0db | 2015-04-24 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Benzyl isothiocyanate 10V, Negative-QTOF | splash10-0002-0900000000-6755d456251a0541ed94 | 2015-04-25 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Benzyl isothiocyanate 20V, Negative-QTOF | splash10-0002-0900000000-2fcb3ba0537189b628de | 2015-04-25 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Benzyl isothiocyanate 40V, Negative-QTOF | splash10-0udj-4900000000-52000359d56b4bbd3d79 | 2015-04-25 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Benzyl isothiocyanate 10V, Positive-QTOF | splash10-0006-9300000000-36e2dbdd7dd78a8f2f10 | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Benzyl isothiocyanate 20V, Positive-QTOF | splash10-0006-9000000000-9428f84221678a6add2d | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Benzyl isothiocyanate 40V, Positive-QTOF | splash10-00kf-9100000000-3969a1ae3b90f0b70396 | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Benzyl isothiocyanate 10V, Negative-QTOF | splash10-0002-0900000000-3562640e821f8add3ef4 | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Benzyl isothiocyanate 20V, Negative-QTOF | splash10-0002-3900000000-6055c25e29b6bc71605a | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Benzyl isothiocyanate 40V, Negative-QTOF | splash10-0a4i-9200000000-b4350e1294364ff09ad0 | 2021-09-24 | Wishart Lab | View Spectrum |
IR Spectra| Spectrum Type | Description | Deposition Date | Source | View |
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| Predicted IR Spectrum | IR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+H]+) | 2023-02-04 | FELIX lab | View Spectrum | | Predicted IR Spectrum | IR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+) | 2023-02-04 | FELIX lab | View Spectrum |
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