| Record Information |
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| Version | 5.0 |
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| Status | Expected but not Quantified |
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| Creation Date | 2012-09-12 00:11:51 UTC |
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| Update Date | 2022-03-07 02:55:57 UTC |
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| HMDB ID | HMDB0038850 |
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| Secondary Accession Numbers | |
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| Metabolite Identification |
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| Common Name | Cycasin |
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| Description | Cycasin belongs to the class of organic compounds known as o-glycosyl compounds. These are glycoside in which a sugar group is bonded through one carbon to another group via a O-glycosidic bond. Based on a literature review a significant number of articles have been published on Cycasin. |
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| Structure | CN(=O)=NCOC1OC(CO)C(O)C(O)C1O InChI=1S/C8H16N2O7/c1-10(15)9-3-16-8-7(14)6(13)5(12)4(2-11)17-8/h4-8,11-14H,2-3H2,1H3/b10-9- |
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| Synonyms | | Value | Source |
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| Methylazoxymethanol beta D glucoside | MeSH | | Methylazoxymethanol beta-D-glucoside | MeSH | | beta-D-Glucoside, methylazoxymethanol | MeSH | | Glucuronate, methylazoxymethanol | MeSH | | (Methyl-ONN-azoxy)methyl beta-D-glucopyranoside | MeSH | | Methylazoxymethanol glucuronate | MeSH | | (2-Hydroxy-2-methyl-2beta -D-glucosyloxyazoxymethane | HMDB | | b-D-Glucosyloxyazoxymethane | HMDB | | beta -D-Glucopyranoside, (methyl-ONN-azoxy)methyl | HMDB | | Cycas revoluta glucoside | HMDB | | Cykazine | HMDB | | Methylazoxymethanol beta -D-glucoside | HMDB | | Methylazoxymethanol glucoside | HMDB | | Methylazoxymethanolbeta -D-glucoside | HMDB | | Cycasin | MeSH |
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| Chemical Formula | C8H16N2O7 |
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| Average Molecular Weight | 252.2218 |
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| Monoisotopic Molecular Weight | 252.095750876 |
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| IUPAC Name | 2-(hydroxymethyl)-6-{[(methyl-oxo-λ⁵-azanylidene)amino]methoxy}oxane-3,4,5-triol |
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| Traditional Name | 2-(hydroxymethyl)-6-{[(methyl-oxo-λ⁵-azanylidene)amino]methoxy}oxane-3,4,5-triol |
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| CAS Registry Number | 14901-08-7 |
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| SMILES | CN(=O)=NCOC1OC(CO)C(O)C(O)C1O |
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| InChI Identifier | InChI=1S/C8H16N2O7/c1-10(15)9-3-16-8-7(14)6(13)5(12)4(2-11)17-8/h4-8,11-14H,2-3H2,1H3/b10-9- |
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| InChI Key | YHLRMABUJXBLCK-KTKRTIGZSA-N |
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| Chemical Taxonomy |
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| Description | Belongs to the class of organic compounds known as o-glycosyl compounds. These are glycoside in which a sugar group is bonded through one carbon to another group via a O-glycosidic bond. |
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| Kingdom | Organic compounds |
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| Super Class | Organic oxygen compounds |
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| Class | Organooxygen compounds |
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| Sub Class | Carbohydrates and carbohydrate conjugates |
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| Direct Parent | O-glycosyl compounds |
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| Alternative Parents | |
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| Substituents | - Hexose monosaccharide
- O-glycosyl compound
- Monosaccharide
- Oxane
- Azoxy compound
- Secondary alcohol
- Acetal
- Oxacycle
- Polyol
- Organoheterocyclic compound
- Alcohol
- Organonitrogen compound
- Hydrocarbon derivative
- Organic oxide
- Organopnictogen compound
- Primary alcohol
- Organic nitrogen compound
- Organic zwitterion
- Organic salt
- Aliphatic heteromonocyclic compound
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| Molecular Framework | Aliphatic heteromonocyclic compounds |
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| External Descriptors | |
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| Ontology |
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| Physiological effect | Not Available |
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| Disposition | |
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| Process | Not Available |
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| Role | |
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| Physical Properties |
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| State | Solid |
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| Experimental Molecular Properties | | Property | Value | Reference |
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| Melting Point | 154 °C | Not Available | | Boiling Point | Not Available | Not Available | | Water Solubility | Not Available | Not Available | | LogP | Not Available | Not Available |
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| Experimental Chromatographic Properties | Not Available |
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| Predicted Molecular Properties | |
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| Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Retention Times Underivatized| Chromatographic Method | Retention Time | Reference |
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| Predicted by Siyang on May 30, 2022 | 9.6226 minutes | 33406817 | | AjsUoB = Accucore 150 Amide HILIC with 10mM Ammonium Formate, 0.1% Formic Acid | 269.1 seconds | 40023050 | | Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid | 767.8 seconds | 40023050 | | Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid | 250.6 seconds | 40023050 | | Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid | 51.9 seconds | 40023050 | | Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid | 171.1 seconds | 40023050 | | RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 56.4 seconds | 40023050 | | Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid | 275.7 seconds | 40023050 | | BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid | 262.6 seconds | 40023050 | | HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate) | 659.8 seconds | 40023050 | | UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid | 574.6 seconds | 40023050 | | BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid | 60.4 seconds | 40023050 | | UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid | 846.4 seconds | 40023050 | | SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 198.1 seconds | 40023050 | | RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 222.1 seconds | 40023050 | | MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate | 565.6 seconds | 40023050 | | KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA | 345.3 seconds | 40023050 | | Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water | 319.8 seconds | 40023050 |
Predicted Kovats Retention IndicesUnderivatizedDerivatized| Derivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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| Cycasin,1TMS,isomer #1 | C[N+]([O-])=NCOC1OC(CO[Si](C)(C)C)C(O)C(O)C1O | 2189.2 | Semi standard non polar | 33892256 | | Cycasin,1TMS,isomer #2 | C[N+]([O-])=NCOC1OC(CO)C(O[Si](C)(C)C)C(O)C1O | 2168.2 | Semi standard non polar | 33892256 | | Cycasin,1TMS,isomer #3 | C[N+]([O-])=NCOC1OC(CO)C(O)C(O[Si](C)(C)C)C1O | 2147.2 | Semi standard non polar | 33892256 | | Cycasin,1TMS,isomer #4 | C[N+]([O-])=NCOC1OC(CO)C(O)C(O)C1O[Si](C)(C)C | 2152.3 | Semi standard non polar | 33892256 | | Cycasin,2TMS,isomer #1 | C[N+]([O-])=NCOC1OC(CO[Si](C)(C)C)C(O[Si](C)(C)C)C(O)C1O | 2201.6 | Semi standard non polar | 33892256 | | Cycasin,2TMS,isomer #2 | C[N+]([O-])=NCOC1OC(CO[Si](C)(C)C)C(O)C(O[Si](C)(C)C)C1O | 2202.5 | Semi standard non polar | 33892256 | | Cycasin,2TMS,isomer #3 | C[N+]([O-])=NCOC1OC(CO[Si](C)(C)C)C(O)C(O)C1O[Si](C)(C)C | 2191.1 | Semi standard non polar | 33892256 | | Cycasin,2TMS,isomer #4 | C[N+]([O-])=NCOC1OC(CO)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C1O | 2170.5 | Semi standard non polar | 33892256 | | Cycasin,2TMS,isomer #5 | C[N+]([O-])=NCOC1OC(CO)C(O[Si](C)(C)C)C(O)C1O[Si](C)(C)C | 2171.6 | Semi standard non polar | 33892256 | | Cycasin,2TMS,isomer #6 | C[N+]([O-])=NCOC1OC(CO)C(O)C(O[Si](C)(C)C)C1O[Si](C)(C)C | 2167.6 | Semi standard non polar | 33892256 | | Cycasin,3TMS,isomer #1 | C[N+]([O-])=NCOC1OC(CO[Si](C)(C)C)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C1O | 2231.4 | Semi standard non polar | 33892256 | | Cycasin,3TMS,isomer #2 | C[N+]([O-])=NCOC1OC(CO[Si](C)(C)C)C(O[Si](C)(C)C)C(O)C1O[Si](C)(C)C | 2257.0 | Semi standard non polar | 33892256 | | Cycasin,3TMS,isomer #3 | C[N+]([O-])=NCOC1OC(CO[Si](C)(C)C)C(O)C(O[Si](C)(C)C)C1O[Si](C)(C)C | 2223.3 | Semi standard non polar | 33892256 | | Cycasin,3TMS,isomer #4 | C[N+]([O-])=NCOC1OC(CO)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C1O[Si](C)(C)C | 2216.6 | Semi standard non polar | 33892256 | | Cycasin,4TMS,isomer #1 | C[N+]([O-])=NCOC1OC(CO[Si](C)(C)C)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C1O[Si](C)(C)C | 2276.2 | Semi standard non polar | 33892256 | | Cycasin,1TBDMS,isomer #1 | C[N+]([O-])=NCOC1OC(CO[Si](C)(C)C(C)(C)C)C(O)C(O)C1O | 2412.4 | Semi standard non polar | 33892256 | | Cycasin,1TBDMS,isomer #2 | C[N+]([O-])=NCOC1OC(CO)C(O[Si](C)(C)C(C)(C)C)C(O)C1O | 2397.0 | Semi standard non polar | 33892256 | | Cycasin,1TBDMS,isomer #3 | C[N+]([O-])=NCOC1OC(CO)C(O)C(O[Si](C)(C)C(C)(C)C)C1O | 2385.9 | Semi standard non polar | 33892256 | | Cycasin,1TBDMS,isomer #4 | C[N+]([O-])=NCOC1OC(CO)C(O)C(O)C1O[Si](C)(C)C(C)(C)C | 2395.2 | Semi standard non polar | 33892256 | | Cycasin,2TBDMS,isomer #1 | C[N+]([O-])=NCOC1OC(CO[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(O)C1O | 2640.1 | Semi standard non polar | 33892256 | | Cycasin,2TBDMS,isomer #2 | C[N+]([O-])=NCOC1OC(CO[Si](C)(C)C(C)(C)C)C(O)C(O[Si](C)(C)C(C)(C)C)C1O | 2642.9 | Semi standard non polar | 33892256 | | Cycasin,2TBDMS,isomer #3 | C[N+]([O-])=NCOC1OC(CO[Si](C)(C)C(C)(C)C)C(O)C(O)C1O[Si](C)(C)C(C)(C)C | 2637.3 | Semi standard non polar | 33892256 | | Cycasin,2TBDMS,isomer #4 | C[N+]([O-])=NCOC1OC(CO)C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C1O | 2631.1 | Semi standard non polar | 33892256 | | Cycasin,2TBDMS,isomer #5 | C[N+]([O-])=NCOC1OC(CO)C(O[Si](C)(C)C(C)(C)C)C(O)C1O[Si](C)(C)C(C)(C)C | 2629.3 | Semi standard non polar | 33892256 | | Cycasin,2TBDMS,isomer #6 | C[N+]([O-])=NCOC1OC(CO)C(O)C(O[Si](C)(C)C(C)(C)C)C1O[Si](C)(C)C(C)(C)C | 2631.0 | Semi standard non polar | 33892256 | | Cycasin,3TBDMS,isomer #1 | C[N+]([O-])=NCOC1OC(CO[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C1O | 2878.9 | Semi standard non polar | 33892256 | | Cycasin,3TBDMS,isomer #2 | C[N+]([O-])=NCOC1OC(CO[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(O)C1O[Si](C)(C)C(C)(C)C | 2892.9 | Semi standard non polar | 33892256 | | Cycasin,3TBDMS,isomer #3 | C[N+]([O-])=NCOC1OC(CO[Si](C)(C)C(C)(C)C)C(O)C(O[Si](C)(C)C(C)(C)C)C1O[Si](C)(C)C(C)(C)C | 2867.9 | Semi standard non polar | 33892256 | | Cycasin,3TBDMS,isomer #4 | C[N+]([O-])=NCOC1OC(CO)C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C1O[Si](C)(C)C(C)(C)C | 2853.5 | Semi standard non polar | 33892256 | | Cycasin,4TBDMS,isomer #1 | C[N+]([O-])=NCOC1OC(CO[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C1O[Si](C)(C)C(C)(C)C | 3098.9 | Semi standard non polar | 33892256 |
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| GC-MS Spectra| Spectrum Type | Description | Splash Key | Deposition Date | Source | View |
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| Predicted GC-MS | Predicted GC-MS Spectrum - Cycasin GC-MS (Non-derivatized) - 70eV, Positive | splash10-0h5r-9850000000-3ae79e36d7b7a3e090ce | 2017-09-01 | Wishart Lab | View Spectrum | | Predicted GC-MS | Predicted GC-MS Spectrum - Cycasin GC-MS (4 TMS) - 70eV, Positive | splash10-004i-9000760000-b350e12e80c5a64f2924 | 2017-10-06 | Wishart Lab | View Spectrum | | Predicted GC-MS | Predicted GC-MS Spectrum - Cycasin GC-MS (Non-derivatized) - 70eV, Positive | Not Available | 2021-10-12 | Wishart Lab | View Spectrum |
MS/MS Spectra| Spectrum Type | Description | Splash Key | Deposition Date | Source | View |
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| Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Cycasin 10V, Positive-QTOF | splash10-000i-3090000000-19f2d0d91e8917e29604 | 2016-08-02 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Cycasin 20V, Positive-QTOF | splash10-004u-9140000000-9389db4aa9cad9ab70e5 | 2016-08-02 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Cycasin 40V, Positive-QTOF | splash10-0006-9220000000-890302a816c15fbbc59c | 2016-08-02 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Cycasin 10V, Negative-QTOF | splash10-0f79-3290000000-693da4f26853aa2678dd | 2016-08-03 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Cycasin 20V, Negative-QTOF | splash10-054x-9440000000-c030d7e270a9e1923845 | 2016-08-03 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Cycasin 40V, Negative-QTOF | splash10-0006-9300000000-f0a64372d5343f3c1093 | 2016-08-03 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Cycasin 10V, Positive-QTOF | splash10-0udj-4290000000-dab40db05cddba32104d | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Cycasin 20V, Positive-QTOF | splash10-006w-9210000000-045abc302fac26225e78 | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Cycasin 40V, Positive-QTOF | splash10-0a4i-9000000000-040fc93954dfd4504202 | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Cycasin 10V, Negative-QTOF | splash10-0udi-2390000000-1cc076ed764d4f391535 | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Cycasin 20V, Negative-QTOF | splash10-0006-9320000000-eb05cde49a57379db841 | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Cycasin 40V, Negative-QTOF | splash10-0006-9100000000-08add1f5d16d8c289142 | 2021-09-25 | Wishart Lab | View Spectrum |
NMR Spectra| Spectrum Type | Description | Deposition Date | Source | View |
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| Predicted 1D NMR | 1H NMR Spectrum (1D, 100 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 100 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 1000 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 1000 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 200 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 200 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 300 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 300 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 400 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 400 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 500 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 500 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 600 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 600 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 700 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 700 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 800 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 800 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 900 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 900 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum |
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