| Record Information |
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| Version | 5.0 |
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| Status | Expected but not Quantified |
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| Creation Date | 2005-11-16 15:48:42 UTC |
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| Update Date | 2020-04-23 20:52:31 UTC |
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| HMDB ID | HMDB0000887 |
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| Secondary Accession Numbers | |
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| Metabolite Identification |
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| Common Name | Hemin |
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| Description | Hemin, also known as hemin IX or protohemin, belongs to the class of organic compounds known as metalloporphyrins. These are polycyclic compounds containing a porphyrin moiety and a metal atom. Hemin is a drug which is used in the management of porphyria attacks, particularly in acute intermittent porphyria. Hemin is found, on average, in the highest concentration within sea-buckthornberries (Hippophae rhamnoides). Hemin has also been detected, but not quantified in, a few different foods, such as anatidaes (Anatidae), chickens (Gallus gallus), and domestic pigs (Sus scrofa domestica). This could make hemin a potential biomarker for the consumption of these foods. Hemin is a primary metabolite. Primary metabolites are metabolically or physiologically essential metabolites. They are directly involved in an organism’s growth, development or reproduction. Based on a literature review a significant number of articles have been published on Hemin. |
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| Structure | CC1=C(CCC(O)=O)C2=CC3=[N]4C(=CC5=C(C)C(C=C)=C6C=C7C(C)=C(C=C)C8=[N]7[Fe]4(Cl)(N2C1=C8)N56)C(C)=C3CCC(O)=O InChI=1S/C34H34N4O4.ClH.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;;/h7-8,13-16H,1-2,9-12H2,3-6H3,(H4,35,36,37,38,39,40,41,42);1H;/q;;+3/p-3/b25-13-,26-13-,27-14-,28-15-,29-14-,30-15-,31-16-,32-16-;; |
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| Synonyms | | Value | Source |
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| Chloro(protoporphyrinato)iron(III) | ChEBI | | Chloro[3,7,12,17-tetramethyl-8,13-divinylporphyrin-2,18-dipropanoato(2-)]iron(III) | ChEBI | | Chlorohemin | ChEBI | | Chloroprotoferrihem | ChEBI | | Ferriprotoporphyrin IX chloride | ChEBI | | Haemin | ChEBI | | Hemin chloride | ChEBI | | Hemin IX | ChEBI | | Hemine | ChEBI | | Panhematin | ChEBI | | Protohemin | ChEBI | | Protohemin IX | ChEBI | | Normosang | Kegg | | Chloro(protoporphyrinato)iron | HMDB | | Chloroprotoferriheme | HMDB | | Chloroprotohemin | HMDB | | Chloroprotoporphyrin IX iron | HMDB | | Ferric hemin | HMDB | | Ferriheme | HMDB | | Ferriporphyrin chloride | HMDB | | Ferriprotoporphyrin | HMDB | | Ferriprotoporphyrin IX | HMDB | | Hamin | HMDB | | Hemin porcine | HMDB | | Hemin ultra-pure | HMDB | | Iron(III) protoporphyrin chloride | HMDB | | Protoferriheme | HMDB | | Protohemin chloride | HMDB | | Teichmann'S crystals | HMDB |
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| Chemical Formula | C34H32ClFeN4O4 |
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| Average Molecular Weight | 651.94 |
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| Monoisotopic Molecular Weight | 651.146150372 |
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| IUPAC Name | 3-[5-(2-carboxyethyl)-1-chloro-14,19-diethenyl-4,10,15,20-tetramethyl-2lambda4,22,23lambda4,25-tetraaza-1-ferraoctacyclo[11.9.1.1^{1,8}.1^{3,21}.0^{2,6}.0^{16,23}.0^{18,22}.0^{11,25}]pentacosa-2(6),3(24),4,7,9,11,13(23),14,16,18,20-undecaen-9-yl]propanoic acid |
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| Traditional Name | 3-[5-(2-carboxyethyl)-1-chloro-14,19-diethenyl-4,10,15,20-tetramethyl-2lambda4,22,23lambda4,25-tetraaza-1-ferraoctacyclo[11.9.1.1^{1,8}.1^{3,21}.0^{2,6}.0^{16,23}.0^{18,22}.0^{11,25}]pentacosa-2(6),3(24),4,7,9,11,13(23),14,16,18,20-undecaen-9-yl]propanoic acid |
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| CAS Registry Number | 16009-13-5 |
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| SMILES | CC1=C(CCC(O)=O)C2=CC3=[N]4C(=CC5=C(C)C(C=C)=C6C=C7C(C)=C(C=C)C8=[N]7[Fe]4(Cl)(N2C1=C8)N56)C(C)=C3CCC(O)=O |
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| InChI Identifier | InChI=1S/C34H34N4O4.ClH.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;;/h7-8,13-16H,1-2,9-12H2,3-6H3,(H4,35,36,37,38,39,40,41,42);1H;/q;;+3/p-3/b25-13-,26-13-,27-14-,28-15-,29-14-,30-15-,31-16-,32-16-;; |
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| InChI Key | BTIJJDXEELBZFS-HXFTUNQESA-K |
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| Chemical Taxonomy |
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| Description | Belongs to the class of organic compounds known as metalloporphyrins. These are polycyclic compounds containing a porphyrin moiety and a metal atom. |
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| Kingdom | Organic compounds |
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| Super Class | Organoheterocyclic compounds |
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| Class | Tetrapyrroles and derivatives |
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| Sub Class | Metallotetrapyrroles |
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| Direct Parent | Metalloporphyrins |
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| Alternative Parents | Not Available |
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| Substituents | Not Available |
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| Molecular Framework | Not Available |
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| External Descriptors | Not Available |
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| Ontology |
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| Physiological effect | Not Available |
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| Disposition | |
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| Process | Not Available |
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| Role | |
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| Physical Properties |
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| State | Solid |
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| Experimental Molecular Properties | | Property | Value | Reference |
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| Melting Point | Not Available | Not Available | | Boiling Point | Not Available | Not Available | | Water Solubility | Not Available | Not Available | | LogP | Not Available | Not Available |
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| Experimental Chromatographic Properties | Not Available |
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| Predicted Molecular Properties | |
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| Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Retention Times Underivatized| Chromatographic Method | Retention Time | Reference |
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| Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid | 2983.4 seconds | 40023050 | | Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid | 201.5 seconds | 40023050 | | Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid | 239.0 seconds | 40023050 | | Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid | 167.5 seconds | 40023050 | | RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 100.1 seconds | 40023050 | | Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid | 628.9 seconds | 40023050 | | BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid | 738.3 seconds | 40023050 | | HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate) | 92.2 seconds | 40023050 | | UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid | 1329.4 seconds | 40023050 | | BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid | 501.6 seconds | 40023050 | | UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid | 1797.1 seconds | 40023050 | | SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 489.9 seconds | 40023050 | | RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 382.3 seconds | 40023050 | | MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate | 224.4 seconds | 40023050 | | KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA | 356.9 seconds | 40023050 | | Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water | 20.0 seconds | 40023050 |
Predicted Kovats Retention IndicesNot Available |
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| General References | - Tsiftsoglou AS, Wong W, Wheeler C, Steinberg HN, Robinson SH: Prevention of anthracycline-induced cytotoxicity in hemopoietic cells by hemin. Cancer Res. 1986 Jul;46(7):3436-40. [PubMed:3708575 ]
- Wyse JW, Butterfield DA: Interaction of hemin with erythrocyte membranes: alterations in the physical state of the major sialoglycoprotein. Biochim Biophys Acta. 1989 Feb 13;979(1):121-6. [PubMed:2537104 ]
- Wu L, Zhang W, Yang H, Xu Q, Yang X: [Determination of blood glucose by chemiluminescent flow-injection analysis with immobilized glucoxidase column]. Hua Xi Yi Ke Da Xue Xue Bao. 2000 Sep;31(3):422-4. [PubMed:12545852 ]
- Alter BP, Schofield JM, He LY, Weinberg RS: Effects of hemin on erythropoiesis. Adv Exp Med Biol. 1989;271:95-102. [PubMed:2486293 ]
- Hooper WC, Pruckler J, Jackson D, Evatt BL: The synergistic effect of hemin and transforming growth factor-beta on hemoglobin accumulation in HEL erythroleukemia cells. Leuk Res. 1991;15(8):753-8. [PubMed:1895756 ]
- Solar I, Muller-Eberhard U, Shviro Y, Shaklai N: Long-term intercalation of residual hemin in erythrocyte membranes distorts the cell. Biochim Biophys Acta. 1991 Feb 11;1062(1):51-8. [PubMed:1998709 ]
- Malik Z, Agam G, Djaldetti M: Effect of hemin and Protoporphyrin IX on the protein-synthesizing activity of human granulocytes, lymphocytes and platelets. Acta Haematol. 1979;61(3):138-43. [PubMed:108889 ]
- Lu L, Broxmeyer HE: The selective enhancing influence of hemin and products of human erythrocytes on colony formation by human multipotential (CFUGEMM) and erythroid (BFUE) progenitor cells in vitro. Exp Hematol. 1983 Sep;11(8):721-9. [PubMed:6628580 ]
- Lakshmi VM, Hsu FF, Zenser TV: Nitric oxide-mediated nitrosation of 2-amino-3,8-dimethylimidazo[4,5-f]quinoxaline potentiated by hemin and myeloperoxidase. Chem Res Toxicol. 2005 Jun;18(6):1038-47. [PubMed:15962939 ]
- Zunszain PA, Ghuman J, Komatsu T, Tsuchida E, Curry S: Crystal structural analysis of human serum albumin complexed with hemin and fatty acid. BMC Struct Biol. 2003 Jul 7;3:6. Epub 2003 Jul 7. [PubMed:12846933 ]
- Doss M, Bode U: [Thin layer chromatographic separation of porphyrins, hemin and lipids on Silica Gel H plates for the determination of the erythrocyte porphyrins as their methyl esters]. J Chromatogr. 1968 Jun 4;35(2):248-56. [PubMed:4297976 ]
- Palma JF, Gao X, Lin CH, Wu S, Solomon WB: Iron protoporphyrin IX (hemin) but not tin or zinc protoporphyrin IX can stimulate gene expression in K562 cells from enhancer elements containing binding sites for NF-E2. Blood. 1994 Aug 15;84(4):1288-97. [PubMed:8049443 ]
- Shaklai N, Shviro Y, Rabizadeh E, Kirschner-Zilber I: Accumulation and drainage of hemin in the red cell membrane. Biochim Biophys Acta. 1985 Dec 5;821(2):355-66. [PubMed:4063370 ]
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