| Record Information |
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| Version | 5.0 |
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| Status | Detected but not Quantified |
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| Creation Date | 2006-05-22 15:12:47 UTC |
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| Update Date | 2023-02-21 17:16:35 UTC |
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| HMDB ID | HMDB0003282 |
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| Secondary Accession Numbers | |
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| Metabolite Identification |
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| Common Name | 1-Methylguanine |
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| Description | 1-Methylguanine is a naturally occurring modified purine derived from tRNA, found in elevated levels in the serum and urine of cancer patients (PMID:2413515 ). Increase of 1-methylguanine in the urine of colorectal tumor bearing patients, has been justified either by a more rapid turnover of nucleic acids in tumor tissue or by an increase in the extent of their methylation (PMID:9069642 ). |
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| Structure | InChI=1S/C6H7N5O/c1-11-5(12)3-4(9-2-8-3)10-6(11)7/h2H,1H3,(H2,7,10)(H,8,9) |
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| Synonyms | | Value | Source |
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| N1-Methylguanine | ChEBI | | 1-Methyl-(8ci)-guanine | HMDB | | 1-Methyl-guanine | HMDB | | RRNA containing N1-methylguanine | HMDB |
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| Chemical Formula | C6H7N5O |
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| Average Molecular Weight | 165.1527 |
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| Monoisotopic Molecular Weight | 165.065059871 |
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| IUPAC Name | 2-amino-1-methyl-6,7-dihydro-1H-purin-6-one |
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| Traditional Name | 2-amino-1-methyl-7H-purin-6-one |
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| CAS Registry Number | 938-85-2 |
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| SMILES | CN1C(N)=NC2=C(NC=N2)C1=O |
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| InChI Identifier | InChI=1S/C6H7N5O/c1-11-5(12)3-4(9-2-8-3)10-6(11)7/h2H,1H3,(H2,7,10)(H,8,9) |
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| InChI Key | RFLVMTUMFYRZCB-UHFFFAOYSA-N |
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| Chemical Taxonomy |
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| Description | Belongs to the class of organic compounds known as 6-oxopurines. These are purines that carry a C=O group at position 6. Purine is a bicyclic aromatic compound made up of a pyrimidine ring fused to an imidazole ring. |
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| Kingdom | Organic compounds |
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| Super Class | Organoheterocyclic compounds |
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| Class | Imidazopyrimidines |
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| Sub Class | Purines and purine derivatives |
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| Direct Parent | 6-oxopurines |
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| Alternative Parents | |
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| Substituents | - 6-oxopurine
- Pyrimidone
- Pyrimidine
- Azole
- Imidazole
- Heteroaromatic compound
- Vinylogous amide
- Lactam
- Azacycle
- Hydrocarbon derivative
- Organic oxide
- Organooxygen compound
- Organonitrogen compound
- Organic nitrogen compound
- Organopnictogen compound
- Organic oxygen compound
- Aromatic heteropolycyclic compound
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| Molecular Framework | Aromatic heteropolycyclic compounds |
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| External Descriptors | |
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| Ontology |
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| Physiological effect | Not Available |
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| Disposition | |
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| Process | Not Available |
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| Role | Not Available |
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| Physical Properties |
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| State | Solid |
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| Experimental Molecular Properties | | Property | Value | Reference |
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| Melting Point | Not Available | Not Available | | Boiling Point | Not Available | Not Available | | Water Solubility | 64310 mg/L @ 25 °C (est) | The Good Scents Company Information System | | LogP | Not Available | Not Available |
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| Experimental Chromatographic Properties | Not Available |
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| Predicted Molecular Properties | |
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| Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Retention Times Underivatized| Chromatographic Method | Retention Time | Reference |
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| Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. Predicted by Afia on May 17, 2022. | 1.56 minutes | 32390414 | | Predicted by Siyang on May 30, 2022 | 9.1506 minutes | 33406817 | | Predicted by Siyang using ReTip algorithm on June 8, 2022 | 3.31 minutes | 32390414 | | AjsUoB = Accucore 150 Amide HILIC with 10mM Ammonium Formate, 0.1% Formic Acid | 60.0 seconds | 40023050 | | Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid | 416.4 seconds | 40023050 | | Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid | 320.7 seconds | 40023050 | | Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid | 55.9 seconds | 40023050 | | Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid | 193.2 seconds | 40023050 | | RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 53.9 seconds | 40023050 | | Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid | 289.2 seconds | 40023050 | | BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid | 267.0 seconds | 40023050 | | HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate) | 201.5 seconds | 40023050 | | UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid | 595.7 seconds | 40023050 | | BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid | 99.7 seconds | 40023050 | | UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid | 685.7 seconds | 40023050 | | SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 193.5 seconds | 40023050 | | RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 213.0 seconds | 40023050 | | MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate | 689.8 seconds | 40023050 | | KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA | 252.6 seconds | 40023050 | | Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water | 188.1 seconds | 40023050 |
Predicted Kovats Retention IndicesUnderivatizedDerivatized| Derivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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| 1-Methylguanine,1TMS,isomer #1 | CN1C(N[Si](C)(C)C)=NC2=C([NH]C=N2)C1=O | 2095.8 | Semi standard non polar | 33892256 | | 1-Methylguanine,1TMS,isomer #1 | CN1C(N[Si](C)(C)C)=NC2=C([NH]C=N2)C1=O | 2215.5 | Standard non polar | 33892256 | | 1-Methylguanine,1TMS,isomer #1 | CN1C(N[Si](C)(C)C)=NC2=C([NH]C=N2)C1=O | 3181.1 | Standard polar | 33892256 | | 1-Methylguanine,1TMS,isomer #2 | CN1C(N)=NC2=C(C1=O)N([Si](C)(C)C)C=N2 | 2056.0 | Semi standard non polar | 33892256 | | 1-Methylguanine,1TMS,isomer #2 | CN1C(N)=NC2=C(C1=O)N([Si](C)(C)C)C=N2 | 2144.9 | Standard non polar | 33892256 | | 1-Methylguanine,1TMS,isomer #2 | CN1C(N)=NC2=C(C1=O)N([Si](C)(C)C)C=N2 | 3008.1 | Standard polar | 33892256 | | 1-Methylguanine,2TMS,isomer #1 | CN1C(N([Si](C)(C)C)[Si](C)(C)C)=NC2=C([NH]C=N2)C1=O | 2013.6 | Semi standard non polar | 33892256 | | 1-Methylguanine,2TMS,isomer #1 | CN1C(N([Si](C)(C)C)[Si](C)(C)C)=NC2=C([NH]C=N2)C1=O | 2214.0 | Standard non polar | 33892256 | | 1-Methylguanine,2TMS,isomer #1 | CN1C(N([Si](C)(C)C)[Si](C)(C)C)=NC2=C([NH]C=N2)C1=O | 2909.2 | Standard polar | 33892256 | | 1-Methylguanine,2TMS,isomer #2 | CN1C(N[Si](C)(C)C)=NC2=C(C1=O)N([Si](C)(C)C)C=N2 | 2115.5 | Semi standard non polar | 33892256 | | 1-Methylguanine,2TMS,isomer #2 | CN1C(N[Si](C)(C)C)=NC2=C(C1=O)N([Si](C)(C)C)C=N2 | 2118.0 | Standard non polar | 33892256 | | 1-Methylguanine,2TMS,isomer #2 | CN1C(N[Si](C)(C)C)=NC2=C(C1=O)N([Si](C)(C)C)C=N2 | 2775.2 | Standard polar | 33892256 | | 1-Methylguanine,3TMS,isomer #1 | CN1C(N([Si](C)(C)C)[Si](C)(C)C)=NC2=C(C1=O)N([Si](C)(C)C)C=N2 | 2086.6 | Semi standard non polar | 33892256 | | 1-Methylguanine,3TMS,isomer #1 | CN1C(N([Si](C)(C)C)[Si](C)(C)C)=NC2=C(C1=O)N([Si](C)(C)C)C=N2 | 2190.8 | Standard non polar | 33892256 | | 1-Methylguanine,3TMS,isomer #1 | CN1C(N([Si](C)(C)C)[Si](C)(C)C)=NC2=C(C1=O)N([Si](C)(C)C)C=N2 | 2490.4 | Standard polar | 33892256 | | 1-Methylguanine,1TBDMS,isomer #1 | CN1C(N[Si](C)(C)C(C)(C)C)=NC2=C([NH]C=N2)C1=O | 2318.6 | Semi standard non polar | 33892256 | | 1-Methylguanine,1TBDMS,isomer #1 | CN1C(N[Si](C)(C)C(C)(C)C)=NC2=C([NH]C=N2)C1=O | 2380.5 | Standard non polar | 33892256 | | 1-Methylguanine,1TBDMS,isomer #1 | CN1C(N[Si](C)(C)C(C)(C)C)=NC2=C([NH]C=N2)C1=O | 3189.3 | Standard polar | 33892256 | | 1-Methylguanine,1TBDMS,isomer #2 | CN1C(N)=NC2=C(C1=O)N([Si](C)(C)C(C)(C)C)C=N2 | 2339.1 | Semi standard non polar | 33892256 | | 1-Methylguanine,1TBDMS,isomer #2 | CN1C(N)=NC2=C(C1=O)N([Si](C)(C)C(C)(C)C)C=N2 | 2309.6 | Standard non polar | 33892256 | | 1-Methylguanine,1TBDMS,isomer #2 | CN1C(N)=NC2=C(C1=O)N([Si](C)(C)C(C)(C)C)C=N2 | 3078.3 | Standard polar | 33892256 | | 1-Methylguanine,2TBDMS,isomer #1 | CN1C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=NC2=C([NH]C=N2)C1=O | 2412.9 | Semi standard non polar | 33892256 | | 1-Methylguanine,2TBDMS,isomer #1 | CN1C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=NC2=C([NH]C=N2)C1=O | 2629.3 | Standard non polar | 33892256 | | 1-Methylguanine,2TBDMS,isomer #1 | CN1C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=NC2=C([NH]C=N2)C1=O | 2902.7 | Standard polar | 33892256 | | 1-Methylguanine,2TBDMS,isomer #2 | CN1C(N[Si](C)(C)C(C)(C)C)=NC2=C(C1=O)N([Si](C)(C)C(C)(C)C)C=N2 | 2552.4 | Semi standard non polar | 33892256 | | 1-Methylguanine,2TBDMS,isomer #2 | CN1C(N[Si](C)(C)C(C)(C)C)=NC2=C(C1=O)N([Si](C)(C)C(C)(C)C)C=N2 | 2514.7 | Standard non polar | 33892256 | | 1-Methylguanine,2TBDMS,isomer #2 | CN1C(N[Si](C)(C)C(C)(C)C)=NC2=C(C1=O)N([Si](C)(C)C(C)(C)C)C=N2 | 2831.5 | Standard polar | 33892256 | | 1-Methylguanine,3TBDMS,isomer #1 | CN1C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=NC2=C(C1=O)N([Si](C)(C)C(C)(C)C)C=N2 | 2689.3 | Semi standard non polar | 33892256 | | 1-Methylguanine,3TBDMS,isomer #1 | CN1C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=NC2=C(C1=O)N([Si](C)(C)C(C)(C)C)C=N2 | 2829.9 | Standard non polar | 33892256 | | 1-Methylguanine,3TBDMS,isomer #1 | CN1C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=NC2=C(C1=O)N([Si](C)(C)C(C)(C)C)C=N2 | 2694.2 | Standard polar | 33892256 |
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| GC-MS Spectra| Spectrum Type | Description | Splash Key | Deposition Date | Source | View |
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| Predicted GC-MS | Predicted GC-MS Spectrum - 1-Methylguanine GC-MS (Non-derivatized) - 70eV, Positive | splash10-00kr-1900000000-45dafb47231261a33e34 | 2017-09-01 | Wishart Lab | View Spectrum | | Predicted GC-MS | Predicted GC-MS Spectrum - 1-Methylguanine GC-MS (Non-derivatized) - 70eV, Positive | Not Available | 2021-10-12 | Wishart Lab | View Spectrum |
MS/MS Spectra| Spectrum Type | Description | Splash Key | Deposition Date | Source | View |
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| Experimental LC-MS/MS | LC-MS/MS Spectrum - 1-Methylguanine Quattro_QQQ 10V, Positive-QTOF (Annotated) | splash10-014i-0900000000-e0f3b732f335f66f7219 | 2012-07-25 | HMDB team, MONA | View Spectrum | | Experimental LC-MS/MS | LC-MS/MS Spectrum - 1-Methylguanine Quattro_QQQ 25V, Positive-QTOF (Annotated) | splash10-001j-1900000000-b84f791d4a4bc8151328 | 2012-07-25 | HMDB team, MONA | View Spectrum | | Experimental LC-MS/MS | LC-MS/MS Spectrum - 1-Methylguanine Quattro_QQQ 40V, Positive-QTOF (Annotated) | splash10-016r-9000000000-50d063af89477717240c | 2012-07-25 | HMDB team, MONA | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 1-Methylguanine 10V, Positive-QTOF | splash10-014i-0900000000-b4eedcd30b62cd8b922a | 2017-09-01 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 1-Methylguanine 20V, Positive-QTOF | splash10-014i-0900000000-78d5a20571bea640c96d | 2017-09-01 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 1-Methylguanine 40V, Positive-QTOF | splash10-053u-9100000000-62d84fcae8d967f0c60c | 2017-09-01 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 1-Methylguanine 10V, Negative-QTOF | splash10-03di-0900000000-5e14e1adacea2bac4677 | 2017-09-01 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 1-Methylguanine 20V, Negative-QTOF | splash10-03di-0900000000-62ed5e872e13f95fff3c | 2017-09-01 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 1-Methylguanine 40V, Negative-QTOF | splash10-066u-9100000000-a6303b778bf2e8212173 | 2017-09-01 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 1-Methylguanine 10V, Positive-QTOF | splash10-014i-0900000000-7f20cf9333bbb1eb98e1 | 2021-09-23 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 1-Methylguanine 20V, Positive-QTOF | splash10-014i-0900000000-deea321d76dc8808ec21 | 2021-09-23 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 1-Methylguanine 40V, Positive-QTOF | splash10-05o0-9300000000-f70bf250b22aa781870f | 2021-09-23 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 1-Methylguanine 10V, Negative-QTOF | splash10-03di-0900000000-11e5406fb2e0acd600c0 | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 1-Methylguanine 20V, Negative-QTOF | splash10-0a4i-3900000000-d42166d37275a2e5655b | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 1-Methylguanine 40V, Negative-QTOF | splash10-014i-9200000000-3c1e78a8e0f4457f1b8b | 2021-09-25 | Wishart Lab | View Spectrum |
NMR Spectra| Spectrum Type | Description | Deposition Date | Source | View |
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| Experimental 1D NMR | 1H NMR Spectrum (1D, 500 MHz, H2O, experimental) | 2012-12-05 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 100 MHz, D2O, predicted) | 2021-09-29 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 100 MHz, D2O, predicted) | 2021-09-29 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 1000 MHz, D2O, predicted) | 2021-09-29 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 1000 MHz, D2O, predicted) | 2021-09-29 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 200 MHz, D2O, predicted) | 2021-09-29 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 200 MHz, D2O, predicted) | 2021-09-29 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 300 MHz, D2O, predicted) | 2021-09-29 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 300 MHz, D2O, predicted) | 2021-09-29 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 400 MHz, D2O, predicted) | 2021-09-29 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 400 MHz, D2O, predicted) | 2021-09-29 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 500 MHz, D2O, predicted) | 2021-09-29 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 500 MHz, D2O, predicted) | 2021-09-29 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 600 MHz, D2O, predicted) | 2021-09-29 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 600 MHz, D2O, predicted) | 2021-09-29 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 700 MHz, D2O, predicted) | 2021-09-29 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 700 MHz, D2O, predicted) | 2021-09-29 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 800 MHz, D2O, predicted) | 2021-09-29 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 800 MHz, D2O, predicted) | 2021-09-29 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 900 MHz, D2O, predicted) | 2021-09-29 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 900 MHz, D2O, predicted) | 2021-09-29 | Wishart Lab | View Spectrum |
IR Spectra| Spectrum Type | Description | Deposition Date | Source | View |
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| Predicted IR Spectrum | IR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M-H]-) | 2023-02-03 | FELIX lab | View Spectrum | | Predicted IR Spectrum | IR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+H]+) | 2023-02-03 | FELIX lab | View Spectrum | | Predicted IR Spectrum | IR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+) | 2023-02-03 | FELIX lab | View Spectrum |
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| General References | - Mills GC, Schmalstieg FC, Goldblum RM: Urinary excretion of modified purines and nucleosides in immunodeficient children. Biochem Med. 1985 Aug;34(1):37-51. [PubMed:4052062 ]
- Porcelli B, Muraca LF, Frosi B, Marinello E, Vernillo R, De Martino A, Catinella S, Traldi P: Fast-atom bombardment mass spectrometry for mapping of endogenous methylated purine bases in urine extracts. Rapid Commun Mass Spectrom. 1997;11(4):398-404. [PubMed:9069642 ]
- Di Pietro MC, Vannoni D, Leoncini R, Liso G, Guerranti R, Marinello E: Determination of urinary methylated purine pattern by high-performance liquid chromatography. J Chromatogr B Biomed Sci Appl. 2001 Feb 10;751(1):87-92. [PubMed:11232859 ]
- Kerr SJ: Induction of adipocyte formation in 10T1/2 cells by 1-methylguanine and 7-methylguanine. Tumour Biol. 1985;6(2):115-21. [PubMed:2413515 ]
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