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Showing metabocard for Glutarate semialdehyde (HMDB0012233)

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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2009-04-06 16:21:27 UTC
Update Date2023-02-21 17:17:45 UTC
HMDB IDHMDB0012233
Secondary Accession Numbers
  • HMDB12233
Metabolite Identification
Common NameGlutarate semialdehyde
DescriptionIn the lysine degradation IV pathway, glutarate semialdehyde reacts with NADP+ and H2O to produce glutarate, NADPH, and H+. In this pathway, glutarate semialdehyde is produced by the reaction between 5-aminopentanoate and 2-ketoglutarate, with L-glutamate as a byproduct. The enzyme responsible for this reaction is 5-aminovalerate aminotransferase. In the lysine degradation III pathway, glutarate semialdehyde reacts with NAD+ and H2O to produce glutarate and NADH. In this pathway, glutarate semialdehyde is produced by the reaction between 5-aminopentanoate and 2-ketoglutarate, with L-glutamate as a byproduct. The enzyme responsible for this reaction is 5-aminovalerate aminotransferase.
Structure
Data?1676999865
MOL3D MOLSDF3D SDFPDB3D PDBSMILESInChI

MOL for HMDB0012233 (Glutarate semialdehyde)


  Mrv0541 02241203522D          

  8  7  0  0  0  0            999 V2000
   12.9073   -8.5176    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.6217   -8.1051    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.3362   -8.5176    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.0507   -8.1051    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.7651   -8.5176    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.1928   -8.1051    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.0507   -7.2801    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.1928   -7.2801    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  0  0  0  0
  3  2  1  0  0  0  0
  4  3  1  0  0  0  0
  5  4  1  0  0  0  0
  6  1  1  0  0  0  0
  7  4  2  0  0  0  0
  8  6  2  0  0  0  0
M  END
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3D MOL for HMDB0012233 (Glutarate semialdehyde)

HMDB0012233
     RDKit          3D
Glutarate semialdehyde
 16 15  0  0  0  0  0  0  0  0999 V2000
   -2.5555   -0.5850   -0.5779 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2334   -0.2753    0.5552 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2863    0.8300    0.7455 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1474    0.4921    0.4720 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4102    0.0174   -0.9383 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8436   -0.2676   -1.0552 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5330    0.4095   -1.8462 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4163   -1.2703   -0.2973 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6650   -0.8365    1.3743 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3208    1.1505    1.8318 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5795    1.7306    0.1577 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7623    1.3679    0.7592 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4875   -0.3454    1.1342 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1265   -0.9482   -1.0955 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0966    0.7541   -1.7037 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0701   -1.0626    0.4839 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  2  0
  6  8  1  0
  2  9  1  0
  3 10  1  0
  3 11  1  0
  4 12  1  0
  4 13  1  0
  5 14  1  0
  5 15  1  0
  8 16  1  0
M  END
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3D SDF for HMDB0012233 (Glutarate semialdehyde)


  Mrv0541 02241203522D          

  8  7  0  0  0  0            999 V2000
   12.9073   -8.5176    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.6217   -8.1051    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.3362   -8.5176    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.0507   -8.1051    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.7651   -8.5176    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.1928   -8.1051    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.0507   -7.2801    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.1928   -7.2801    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  0  0  0  0
  3  2  1  0  0  0  0
  4  3  1  0  0  0  0
  5  4  1  0  0  0  0
  6  1  1  0  0  0  0
  7  4  2  0  0  0  0
  8  6  2  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0012233

> <DATABASE_NAME>
hmdb

> <SMILES>
OC(=O)CCCC=O

> <INCHI_IDENTIFIER>
InChI=1S/C5H8O3/c6-4-2-1-3-5(7)8/h4H,1-3H2,(H,7,8)

> <INCHI_KEY>
VBKPPDYGFUZOAJ-UHFFFAOYSA-N

> <FORMULA>
C5H8O3

> <MOLECULAR_WEIGHT>
116.1152

> <EXACT_MASS>
116.047344122

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_AVERAGE_POLARIZABILITY>
11.259526180472978

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
5-oxopentanoic acid

> <ALOGPS_LOGP>
-0.07

> <JCHEM_LOGP>
-0.11253055466666681

> <ALOGPS_LOGS>
-0.05

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
15.093422671780562

> <JCHEM_PKA_STRONGEST_ACIDIC>
4.327464753861699

> <JCHEM_PKA_STRONGEST_BASIC>
-6.944627704913942

> <JCHEM_POLAR_SURFACE_AREA>
54.37

> <JCHEM_REFRACTIVITY>
27.212600000000002

> <JCHEM_ROTATABLE_BOND_COUNT>
4

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.03e+02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
5-oxopentanoic acid

> <JCHEM_VEBER_RULE>
0

$$$$
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3D-SDF for HMDB0012233 (Glutarate semialdehyde)

HMDB0012233
     RDKit          3D
Glutarate semialdehyde
 16 15  0  0  0  0  0  0  0  0999 V2000
   -2.5555   -0.5850   -0.5779 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2334   -0.2753    0.5552 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2863    0.8300    0.7455 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1474    0.4921    0.4720 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4102    0.0174   -0.9383 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8436   -0.2676   -1.0552 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5330    0.4095   -1.8462 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4163   -1.2703   -0.2973 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6650   -0.8365    1.3743 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3208    1.1505    1.8318 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5795    1.7306    0.1577 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7623    1.3679    0.7592 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4875   -0.3454    1.1342 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1265   -0.9482   -1.0955 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0966    0.7541   -1.7037 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0701   -1.0626    0.4839 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  2  0
  6  8  1  0
  2  9  1  0
  3 10  1  0
  3 11  1  0
  4 12  1  0
  4 13  1  0
  5 14  1  0
  5 15  1  0
  8 16  1  0
M  END
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PDB for HMDB0012233 (Glutarate semialdehyde)

HEADER    PROTEIN                                 24-FEB-12   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-FEB-12         0                                  
HETATM    1  C   UNK     0      24.094 -15.900   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      25.427 -15.130   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      26.761 -15.900   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      28.095 -15.130   0.000  0.00  0.00           C+0
HETATM    5  O   UNK     0      29.428 -15.900   0.000  0.00  0.00           O+0
HETATM    6  C   UNK     0      22.760 -15.130   0.000  0.00  0.00           C+0
HETATM    7  O   UNK     0      28.095 -13.590   0.000  0.00  0.00           O+0
HETATM    8  O   UNK     0      22.760 -13.590   0.000  0.00  0.00           O+0
CONECT    1    2    6                                                       
CONECT    2    1    3                                                       
CONECT    3    2    4                                                       
CONECT    4    3    5    7                                                  
CONECT    5    4                                                            
CONECT    6    1    8                                                       
CONECT    7    4                                                            
CONECT    8    6                                                            
MASTER        0    0    0    0    0    0    0    0    8    0   14    0
END
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3D PDB for HMDB0012233 (Glutarate semialdehyde)

COMPND    HMDB0012233
HETATM    1  O1  UNL     1      -2.555  -0.585  -0.578  1.00  0.00           O  
HETATM    2  C1  UNL     1      -2.233  -0.275   0.555  1.00  0.00           C  
HETATM    3  C2  UNL     1      -1.286   0.830   0.746  1.00  0.00           C  
HETATM    4  C3  UNL     1       0.147   0.492   0.472  1.00  0.00           C  
HETATM    5  C4  UNL     1       0.410   0.017  -0.938  1.00  0.00           C  
HETATM    6  C5  UNL     1       1.844  -0.268  -1.055  1.00  0.00           C  
HETATM    7  O2  UNL     1       2.533   0.409  -1.846  1.00  0.00           O  
HETATM    8  O3  UNL     1       2.416  -1.270  -0.297  1.00  0.00           O  
HETATM    9  H1  UNL     1      -2.665  -0.836   1.374  1.00  0.00           H  
HETATM   10  H2  UNL     1      -1.321   1.150   1.832  1.00  0.00           H  
HETATM   11  H3  UNL     1      -1.580   1.731   0.158  1.00  0.00           H  
HETATM   12  H4  UNL     1       0.762   1.368   0.759  1.00  0.00           H  
HETATM   13  H5  UNL     1       0.487  -0.345   1.134  1.00  0.00           H  
HETATM   14  H6  UNL     1      -0.126  -0.948  -1.095  1.00  0.00           H  
HETATM   15  H7  UNL     1       0.097   0.754  -1.704  1.00  0.00           H  
HETATM   16  H8  UNL     1       3.070  -1.063   0.484  1.00  0.00           H  
CONECT    1    2    2
CONECT    2    3    9
CONECT    3    4   10   11
CONECT    4    5   12   13
CONECT    5    6   14   15
CONECT    6    7    7    8
CONECT    8   16
END
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SMILES for HMDB0012233 (Glutarate semialdehyde)

OC(=O)CCCC=O
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INCHI for HMDB0012233 (Glutarate semialdehyde)

InChI=1S/C5H8O3/c6-4-2-1-3-5(7)8/h4H,1-3H2,(H,7,8)
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View in JSmolView NMR AssignmentsView Stereo Labels
Synonyms
ValueSource
2-Formylethylacetic acidChEBI
4-Formylbutyric acidChEBI
5-oxo-ValeriansaeureChEBI
5-oxo-Valeric acidChEBI
5-OxopentanoateChEBI
5-Oxovaleric acidChEBI
2-FormylethylacetateGenerator
4-FormylbutyrateGenerator
5-oxo-ValerateGenerator
5-Oxopentanoic acidGenerator
5-OxovalerateGenerator
Glutaric acid semialdehydeGenerator
5-oxo-PentanoateHMDB, Generator
5-oxo-Pentanoic acidHMDB
Glutarate semialdehydeChEBI
Chemical FormulaC5H8O3
Average Molecular Weight116.1152
Monoisotopic Molecular Weight116.047344122
IUPAC Name5-oxopentanoic acid
Traditional Name5-oxopentanoic acid
CAS Registry Number5746-02-1
SMILES
OC(=O)CCCC=O
InChI Identifier
InChI=1S/C5H8O3/c6-4-2-1-3-5(7)8/h4H,1-3H2,(H,7,8)
InChI KeyVBKPPDYGFUZOAJ-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as straight chain fatty acids. These are fatty acids with a straight aliphatic chain.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassFatty Acyls
Sub ClassFatty acids and conjugates
Direct ParentStraight chain fatty acids
Alternative Parents
Substituents
  • Straight chain fatty acid
  • Alpha-hydrogen aldehyde
  • Monocarboxylic acid or derivatives
  • Carboxylic acid
  • Carboxylic acid derivative
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Carbonyl group
  • Aldehyde
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
Biological locationRoute of exposureSource
Process
Naturally occurring process
Role
Biological roleIndustrial application
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility103 g/LALOGPS
logP-0.07ALOGPS
logP-0.11ChemAxon
logS-0.05ALOGPS
pKa (Strongest Acidic)4.33ChemAxon
pKa (Strongest Basic)-6.9ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area54.37 ŲChemAxon
Rotatable Bond Count4ChemAxon
Refractivity27.21 m³·mol⁻¹ChemAxon
Polarizability11.26 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+124.21531661259
DarkChem[M-H]-120.29931661259
DeepCCS[M+H]+125.90430932474
DeepCCS[M-H]-123.76430932474
DeepCCS[M-2H]-159.37130932474
DeepCCS[M+Na]+134.15730932474
AllCCS[M+H]+127.632859911
AllCCS[M+H-H2O]+123.432859911
AllCCS[M+NH4]+131.532859911
AllCCS[M+Na]+132.732859911
AllCCS[M-H]-126.132859911
AllCCS[M+Na-2H]-129.232859911
AllCCS[M+HCOO]-132.732859911

Predicted Retention Times

Underivatized

Chromatographic MethodRetention TimeReference
Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. Predicted by Afia on May 17, 2022.2.27 minutes32390414
Predicted by Siyang on May 30, 20229.0618 minutes33406817
Predicted by Siyang using ReTip algorithm on June 8, 20221.94 minutes32390414
AjsUoB = Accucore 150 Amide HILIC with 10mM Ammonium Formate, 0.1% Formic Acid124.1 seconds40023050
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid1069.2 seconds40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid323.5 seconds40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid102.4 seconds40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid208.7 seconds40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid86.2 seconds40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid266.0 seconds40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid322.8 seconds40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)116.0 seconds40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid677.4 seconds40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid222.8 seconds40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid857.5 seconds40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid208.8 seconds40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid227.3 seconds40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate577.7 seconds40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA258.0 seconds40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water285.0 seconds40023050

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Glutarate semialdehydeOC(=O)CCCC=O2214.9Standard polar33892256
Glutarate semialdehydeOC(=O)CCCC=O926.1Standard non polar33892256
Glutarate semialdehydeOC(=O)CCCC=O1087.0Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Glutarate semialdehyde,1TMS,isomer #1C[Si](C)(C)OC(=O)CCCC=O1177.4Semi standard non polar33892256
Glutarate semialdehyde,1TMS,isomer #2C[Si](C)(C)OC=CCCC(=O)O1303.2Semi standard non polar33892256
Glutarate semialdehyde,2TMS,isomer #1C[Si](C)(C)OC=CCCC(=O)O[Si](C)(C)C1368.1Semi standard non polar33892256
Glutarate semialdehyde,2TMS,isomer #1C[Si](C)(C)OC=CCCC(=O)O[Si](C)(C)C1341.9Standard non polar33892256
Glutarate semialdehyde,2TMS,isomer #1C[Si](C)(C)OC=CCCC(=O)O[Si](C)(C)C1435.0Standard polar33892256
Glutarate semialdehyde,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)CCCC=O1411.9Semi standard non polar33892256
Glutarate semialdehyde,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC=CCCC(=O)O1537.8Semi standard non polar33892256
Glutarate semialdehyde,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC=CCCC(=O)O[Si](C)(C)C(C)(C)C1783.9Semi standard non polar33892256
Glutarate semialdehyde,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC=CCCC(=O)O[Si](C)(C)C(C)(C)C1785.2Standard non polar33892256
Glutarate semialdehyde,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC=CCCC(=O)O[Si](C)(C)C(C)(C)C1705.2Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Glutarate semialdehyde GC-MS (Non-derivatized) - 70eV, Positivesplash10-002f-9000000000-d31fc19221f57a1260962017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Glutarate semialdehyde GC-MS (1 TMS) - 70eV, Positivesplash10-00di-9300000000-3c7940e0ecc4c8f8e47e2017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Glutarate semialdehyde GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glutarate semialdehyde 10V, Positive-QTOFsplash10-0002-9200000000-f7b6804cb8f91e8494df2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glutarate semialdehyde 20V, Positive-QTOFsplash10-006t-9000000000-4849c70b25a2d4f8af7c2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glutarate semialdehyde 40V, Positive-QTOFsplash10-054o-9000000000-7421063eb00645aa22832017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glutarate semialdehyde 10V, Negative-QTOFsplash10-014i-5900000000-c1f4c5abe2f30f8c5b312017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glutarate semialdehyde 20V, Negative-QTOFsplash10-014j-9400000000-a3a1cefada4e242ec22f2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glutarate semialdehyde 40V, Negative-QTOFsplash10-0006-9000000000-b82291299befed9ad4c52017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glutarate semialdehyde 10V, Positive-QTOFsplash10-006y-9000000000-2e6eade4cb5067e0ff572021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glutarate semialdehyde 20V, Positive-QTOFsplash10-0596-9000000000-5ccdfa4d862c64289ea52021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glutarate semialdehyde 40V, Positive-QTOFsplash10-0006-9000000000-233295c53b43e378a2772021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glutarate semialdehyde 10V, Negative-QTOFsplash10-0002-9100000000-832bd65f9e6872e77aad2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glutarate semialdehyde 20V, Negative-QTOFsplash10-0007-9000000000-2893696f938f857ab95d2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glutarate semialdehyde 40V, Negative-QTOFsplash10-0006-9000000000-7f6df800f91cc51402a12021-09-22Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-16Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-16Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-16Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-16Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-16Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-16Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-16Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-16Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-16Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-16Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-16Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-16Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-16Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-16Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-16Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-16Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-16Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-16Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-16Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-16Wishart LabView Spectrum

IR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M-H]-)2023-02-03FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+H]+)2023-02-03FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+)2023-02-03FELIX labView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB028876
KNApSAcK IDNot Available
Chemspider ID388989
KEGG Compound IDC03273
BioCyc IDCPD-654
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound439963
PDB IDNot Available
ChEBI ID39153
Food Biomarker OntologyNot Available
VMH IDOXPTN
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.