Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-06 15:00:14 UTC
Update Date2020-07-06 16:00:59 UTC
HMDB IDHMDB0013854
Secondary Accession Numbers
  • HMDB13854
Metabolite Identification
Common NameN4-Acetylsulfamethoxazole
DescriptionN4-Acetylsulfamethoxazole is a metabolite of the sulfonamide bacteriostatic antibiotic sulfamethoxazole. Sulfamethoxazole is metabolized via acetylation catalyzed by liver extramitochondrial N-acetyl transferases. Acetylsulfamethoxazole is excreted in urine. Acetylsulfamethoxazole and sulfamethoxazole can be used as a probe for the molecular percentage enrichment of liver extramitochondrial acetyl-CoA. N4-Acetylsulfamethoxazole can be used as a reference for measuring sulfamethoxazole impurities and waste determination (PMID: 15307787 ). It is one of the critical aspects of urine and stone analysis (PMID: 3811034 ) and its quantitative determination in body fluids could be performed by reversed-phase high-performance liquid chromatography, a rapid, precise and simple procedure (PMID: 6668314 ). It is also reported the renal excretion rate of the metabolite N4-acetylsulfamethoxazole is not dependent on the urinary pH (PMID: 670346 ). N4-Acetylsulfamethoxazole is only found in individuals who have consumed the drug sulfamethoxazole.
Structure
Data?1582753148
Synonyms
ValueSource
4'-((5-Methyl-3-isoxazolyl)sulfamoyl)acetanilideChEBI
AcetylsulfamethoxazoleChEBI
GantanolChEBI
N(4)-AcetylsulfisomezoleChEBI
N(4)-AcetylsulfulfamethoxazoleChEBI
SMX-AcetateChEBI
Sulfamethoxazole acetateChEBI
Sulfisomezole-N(4)-acetateChEBI
4'-((5-Methyl-3-isoxazolyl)sulphamoyl)acetanilideGenerator
AcetylsulphamethoxazoleGenerator
N(4)-AcetylsulphisomezoleGenerator
N(4)-AcetylsulphulfamethoxazoleGenerator
SMX-Acetic acidGenerator
Sulfamethoxazole acetic acidGenerator
Sulphamethoxazole acetateGenerator
Sulphamethoxazole acetic acidGenerator
Sulfisomezole-N(4)-acetic acidGenerator
Sulphisomezole-N(4)-acetateGenerator
Sulphisomezole-N(4)-acetic acidGenerator
N4-AcetylsulphamethoxazoleGenerator
N-{4-[(5-methylisoxazol-3-yl)sulfamoyl]phenyl}acetamideHMDB
N4-AcetylsulfisomezoleHMDB
N4-AcetylsulfulfamethoxazoleHMDB
Sulfisomezole-N4-acetateHMDB
N(4)-AcetylsulfamethoxazoleHMDB
N(4)-AcetylsulphamethoxazoleHMDB
N-AcetylsulphamethoxazoleHMDB
N4-AcetylsulfamethoxazoleChEBI
Chemical FormulaC12H13N3O4S
Average Molecular Weight295.314
Monoisotopic Molecular Weight295.062676609
IUPAC NameN-{4-[(5-methyl-1,2-oxazol-3-yl)sulfamoyl]phenyl}ethanimidic acid
Traditional NameN(sup 4)-acetylsulfisomezole
CAS Registry Number21312-10-7
SMILES
CC(O)=NC1=CC=C(C=C1)S(=O)(=O)NC1=NOC(C)=C1
InChI Identifier
InChI=1S/C12H13N3O4S/c1-8-7-12(14-19-8)15-20(17,18)11-5-3-10(4-6-11)13-9(2)16/h3-7H,1-2H3,(H,13,16)(H,14,15)
InChI KeyGXPIUNZCALHVBA-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as benzenesulfonamides. These are organic compounds containing a sulfonamide group that is S-linked to a benzene ring.
KingdomOrganic compounds
Super ClassBenzenoids
ClassBenzene and substituted derivatives
Sub ClassBenzenesulfonamides
Direct ParentBenzenesulfonamides
Alternative Parents
Substituents
  • Benzenesulfonamide
  • Benzenesulfonyl group
  • Organosulfonic acid amide
  • Imidolactam
  • Azole
  • Isoxazole
  • Organic sulfonic acid or derivatives
  • Organosulfonic acid or derivatives
  • Heteroaromatic compound
  • Sulfonyl
  • Aminosulfonyl compound
  • Carboximidic acid
  • Carboximidic acid derivative
  • Oxacycle
  • Azacycle
  • Organoheterocyclic compound
  • Propargyl-type 1,3-dipolar organic compound
  • Organic 1,3-dipolar compound
  • Organosulfur compound
  • Organooxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organic oxygen compound
  • Organic nitrogen compound
  • Organopnictogen compound
  • Organonitrogen compound
  • Aromatic heteromonocyclic compound
Molecular FrameworkAromatic heteromonocyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogP0.86Extrapolated
Experimental Chromatographic Properties

Experimental Collision Cross Sections

Adduct TypeData SourceCCS Value (Å2)Reference
[M-H]-Not Available172.053http://allccs.zhulab.cn/database/detail?ID=AllCCS00001917
[M+H]+Not Available171.45http://allccs.zhulab.cn/database/detail?ID=AllCCS00001917
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.25 g/LALOGPS
logP1.13ALOGPS
logP1.58ChemAxon
logS-3.1ALOGPS
pKa (Strongest Acidic)5.68ChemAxon
pKa (Strongest Basic)0.78ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area104.79 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity75.41 m³·mol⁻¹ChemAxon
Polarizability28.51 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+169.62331661259
DarkChem[M-H]-168.34131661259
DeepCCS[M+H]+172.12130932474
DeepCCS[M-H]-169.76230932474
DeepCCS[M-2H]-202.64830932474
DeepCCS[M+Na]+178.21430932474
AllCCS[M+H]+166.832859911
AllCCS[M+H-H2O]+163.432859911
AllCCS[M+NH4]+170.032859911
AllCCS[M+Na]+170.932859911
AllCCS[M-H]-164.832859911
AllCCS[M+Na-2H]-164.732859911
AllCCS[M+HCOO]-164.732859911

Predicted Retention Times

Underivatized

Chromatographic MethodRetention TimeReference
Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. Predicted by Afia on May 17, 2022.4.24 minutes32390414
Predicted by Siyang on May 30, 202210.3892 minutes33406817
Predicted by Siyang using ReTip algorithm on June 8, 20221.02 minutes32390414
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid1378.8 seconds40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid236.8 seconds40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid102.5 seconds40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid167.2 seconds40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid53.8 seconds40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid314.8 seconds40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid463.6 seconds40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)126.5 seconds40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid713.1 seconds40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid304.3 seconds40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid1124.3 seconds40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid214.2 seconds40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid296.3 seconds40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate407.2 seconds40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA188.0 seconds40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water184.2 seconds40023050

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
N4-AcetylsulfamethoxazoleCC(O)=NC1=CC=C(C=C1)S(=O)(=O)NC1=NOC(C)=C13847.2Standard polar33892256
N4-AcetylsulfamethoxazoleCC(O)=NC1=CC=C(C=C1)S(=O)(=O)NC1=NOC(C)=C12735.0Standard non polar33892256
N4-AcetylsulfamethoxazoleCC(O)=NC1=CC=C(C=C1)S(=O)(=O)NC1=NOC(C)=C12577.9Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
N4-Acetylsulfamethoxazole,1TMS,isomer #1CC(=NC1=CC=C(S(=O)(=O)NC2=NOC(C)=C2)C=C1)O[Si](C)(C)C2636.2Semi standard non polar33892256
N4-Acetylsulfamethoxazole,1TMS,isomer #2CC(O)=NC1=CC=C(S(=O)(=O)N(C2=NOC(C)=C2)[Si](C)(C)C)C=C12628.4Semi standard non polar33892256
N4-Acetylsulfamethoxazole,2TMS,isomer #1CC(=NC1=CC=C(S(=O)(=O)N(C2=NOC(C)=C2)[Si](C)(C)C)C=C1)O[Si](C)(C)C2464.2Semi standard non polar33892256
N4-Acetylsulfamethoxazole,2TMS,isomer #1CC(=NC1=CC=C(S(=O)(=O)N(C2=NOC(C)=C2)[Si](C)(C)C)C=C1)O[Si](C)(C)C2634.9Standard non polar33892256
N4-Acetylsulfamethoxazole,2TMS,isomer #1CC(=NC1=CC=C(S(=O)(=O)N(C2=NOC(C)=C2)[Si](C)(C)C)C=C1)O[Si](C)(C)C3572.2Standard polar33892256
N4-Acetylsulfamethoxazole,1TBDMS,isomer #1CC(=NC1=CC=C(S(=O)(=O)NC2=NOC(C)=C2)C=C1)O[Si](C)(C)C(C)(C)C2919.9Semi standard non polar33892256
N4-Acetylsulfamethoxazole,1TBDMS,isomer #2CC(O)=NC1=CC=C(S(=O)(=O)N(C2=NOC(C)=C2)[Si](C)(C)C(C)(C)C)C=C12881.9Semi standard non polar33892256
N4-Acetylsulfamethoxazole,2TBDMS,isomer #1CC(=NC1=CC=C(S(=O)(=O)N(C2=NOC(C)=C2)[Si](C)(C)C(C)(C)C)C=C1)O[Si](C)(C)C(C)(C)C2963.1Semi standard non polar33892256
N4-Acetylsulfamethoxazole,2TBDMS,isomer #1CC(=NC1=CC=C(S(=O)(=O)N(C2=NOC(C)=C2)[Si](C)(C)C(C)(C)C)C=C1)O[Si](C)(C)C(C)(C)C3102.7Standard non polar33892256
N4-Acetylsulfamethoxazole,2TBDMS,isomer #1CC(=NC1=CC=C(S(=O)(=O)N(C2=NOC(C)=C2)[Si](C)(C)C(C)(C)C)C=C1)O[Si](C)(C)C(C)(C)C3599.0Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - N4-Acetylsulfamethoxazole GC-MS (Non-derivatized) - 70eV, Positivesplash10-0f6t-9360000000-1c2a094865717e2eadde2017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - N4-Acetylsulfamethoxazole GC-MS (1 TMS) - 70eV, Positivesplash10-0002-9231000000-4a60dfa1fba628eae89e2017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - N4-Acetylsulfamethoxazole GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Experimental LC-MS/MSLC-MS/MS Spectrum - N4-Acetylsulfamethoxazole LC-ESI-QTOF , negative-QTOFsplash10-0007-0490000000-52c719984f40afb2fe692017-09-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - N4-Acetylsulfamethoxazole LC-ESI-QTOF , negative-QTOFsplash10-0002-0900000000-885f5298dc9cac736ad22017-09-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - N4-Acetylsulfamethoxazole LC-ESI-QTOF , negative-QTOFsplash10-001i-0900000000-3845d94430e55b3672ce2017-09-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - N4-Acetylsulfamethoxazole LC-ESI-QTOF , negative-QTOFsplash10-001i-0900000000-0f28bd7306e116b236642017-09-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - N4-Acetylsulfamethoxazole LC-ESI-ITFT , negative-QTOFsplash10-0002-0900000000-a931f6f79851f65171432017-09-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - N4-Acetylsulfamethoxazole LC-ESI-ITFT , negative-QTOFsplash10-0006-0390000000-dba8d5adc6ad93ec89172017-09-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - N4-Acetylsulfamethoxazole LC-ESI-ITFT , negative-QTOFsplash10-0002-0900000000-72a1ece66e1150c7e39e2017-09-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - N4-Acetylsulfamethoxazole LC-ESI-ITFT , negative-QTOFsplash10-000t-0900000000-a95d8aa5899e8bda0fe62017-09-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - N4-Acetylsulfamethoxazole LC-ESI-ITFT , negative-QTOFsplash10-001i-0900000000-34815ffdbcd4883ad2dd2017-09-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - N4-Acetylsulfamethoxazole LC-ESI-ITFT , negative-QTOFsplash10-001i-1900000000-1f10de1f050b43bd0fc42017-09-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - N4-Acetylsulfamethoxazole LC-ESI-ITFT , negative-QTOFsplash10-000x-6900000000-6d4e7909426bd265f9ca2017-09-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - N4-Acetylsulfamethoxazole LC-ESI-ITFT , negative-QTOFsplash10-0006-0290000000-71d5ce544864c89f38cd2017-09-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - N4-Acetylsulfamethoxazole LC-ESI-ITFT , negative-QTOFsplash10-0002-0900000000-43bf3d487b565393cd9e2017-09-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - N4-Acetylsulfamethoxazole LC-ESI-ITFT , negative-QTOFsplash10-000t-0900000000-b0416b270d76be3979892017-09-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - N4-Acetylsulfamethoxazole LC-ESI-ITFT , negative-QTOFsplash10-001i-0900000000-25b614db8f59a5f5db392017-09-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - N4-Acetylsulfamethoxazole LC-ESI-ITFT , negative-QTOFsplash10-001i-2900000000-626694102c1eea16e5a62017-09-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - N4-Acetylsulfamethoxazole LC-ESI-ITFT , negative-QTOFsplash10-0002-0900000000-7ce29f406bc6d908f6ea2017-09-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - N4-Acetylsulfamethoxazole LC-ESI-ITFT , negative-QTOFsplash10-0002-0900000000-5c819656360e2573a7d62017-09-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - N4-Acetylsulfamethoxazole LC-ESI-ITFT , negative-QTOFsplash10-0002-0900000000-59a88d63e4fe9a3c607f2017-09-14HMDB team, MONAView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N4-Acetylsulfamethoxazole 10V, Positive-QTOFsplash10-0002-0290000000-084d5be51238fcf30e312016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N4-Acetylsulfamethoxazole 20V, Positive-QTOFsplash10-0002-4960000000-f3937d80cb5ef15c060b2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N4-Acetylsulfamethoxazole 40V, Positive-QTOFsplash10-014j-9600000000-a1b9c309391b9755d2532016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N4-Acetylsulfamethoxazole 10V, Negative-QTOFsplash10-0006-0090000000-7fe70549eb3f29f2a1da2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N4-Acetylsulfamethoxazole 20V, Negative-QTOFsplash10-0udl-1190000000-db29572e3dc68f0a394c2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N4-Acetylsulfamethoxazole 40V, Negative-QTOFsplash10-0udj-7930000000-085cdba4f5be6c55ffbe2016-08-03Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
Biospecimen Locations
  • Blood
  • Urine
Tissue Locations
  • Kidney
  • Liver
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodExpected but not QuantifiedNot QuantifiedNot AvailableNot AvailableTaking drug identified by DrugBank entry details
UrineExpected but not QuantifiedNot QuantifiedNot AvailableNot AvailableTaking drug identified by DrugBank entry details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID58771
KEGG Compound IDC13061
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound80641
PDB IDNot Available
ChEBI ID31169
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Gobel A, McArdell CS, Suter MJ, Giger W: Trace determination of macrolide and sulfonamide antimicrobials, a human sulfonamide metabolite, and trimethoprim in wastewater using liquid chromatography coupled to electrospray tandem mass spectrometry. Anal Chem. 2004 Aug 15;76(16):4756-64. doi: 10.1021/ac0496603. [PubMed:15307787 ]
  2. Asper R, Schmucki O: Critical aspects of urine and stone analysis. Appearance of iatrogenic urinary calculi. Urol Int. 1986;41(5):334-42. doi: 10.1159/000281233. [PubMed:3811034 ]
  3. Weber A, Opheim KE, Siber GR, Ericson JF, Smith AL: High-performance liquid chromatographic quantitation of trimethoprim, sulfamethoxazole, and N4-acetylsulfamethoxazole in body fluids. J Chromatogr. 1983 Dec 9;278(2):337-45. doi: 10.1016/s0378-4347(00)84793-3. [PubMed:6668314 ]
  4. Vree TB, Hekster YA, Baars AM, Damsma JE, Kleijin EV: Determination of trimethoprim and sulfamethoxazole (co-trimoxazole) in body fluids of man by means of high-performance liquid chromatography. J Chromatogr. 1978 Jul 1;146(1):103-12. doi: 10.1016/s0378-4347(00)81294-3. [PubMed:670346 ]