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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:30:41 UTC
Update Date2022-03-07 02:52:10 UTC
HMDB IDHMDB0029486
Secondary Accession Numbers
  • HMDB29486
Metabolite Identification
Common NameIntegrin
DescriptionIntegrin belongs to the class of organic compounds known as 3-prenylated flavones. These are flavones that features a C5-isoprenoid substituent at the 3-position. Thus, integrin is considered to be a flavonoid. In humans, integrin is involved in the tirofiban action pathway. Integrin is a primary metabolite. Primary metabolites are metabolically or physiologically essential metabolites. They are directly involved in an organism’s growth, development or reproduction. Based on a literature review a small amount of articles have been published on Integrin.
Structure
Data?1582753425
Synonyms
ValueSource
2',4',5-Trihydroxy-7-methoxy-3-prenylflavoneHMDB
Integrin?HMDB
Chemical FormulaC21H20O6
Average Molecular Weight368.3799
Monoisotopic Molecular Weight368.125988372
IUPAC Name2-(2,4-dihydroxyphenyl)-5-hydroxy-7-methoxy-3-(3-methylbut-2-en-1-yl)-4H-chromen-4-one
Traditional Nameintegrin
CAS Registry Number60791-49-3
SMILES
COC1=CC(O)=C2C(=O)C(CC=C(C)C)=C(OC2=C1)C1=C(O)C=C(O)C=C1
InChI Identifier
InChI=1S/C21H20O6/c1-11(2)4-6-15-20(25)19-17(24)9-13(26-3)10-18(19)27-21(15)14-7-5-12(22)8-16(14)23/h4-5,7-10,22-24H,6H2,1-3H3
InChI KeyCTCHDPAJHVDPRN-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as 3-prenylated flavones. These are flavones that features a C5-isoprenoid substituent at the 3-position.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassFlavonoids
Sub ClassFlavones
Direct Parent3-prenylated flavones
Alternative Parents
Substituents
  • 3-prenylated flavone
  • 7-methoxyflavonoid-skeleton
  • 4'-hydroxyflavonoid
  • 5-hydroxyflavonoid
  • Hydroxyflavonoid
  • Chromone
  • Benzopyran
  • 1-benzopyran
  • Anisole
  • Resorcinol
  • 1-hydroxy-4-unsubstituted benzenoid
  • 1-hydroxy-2-unsubstituted benzenoid
  • Alkyl aryl ether
  • Phenol
  • Pyranone
  • Monocyclic benzene moiety
  • Benzenoid
  • Pyran
  • Vinylogous acid
  • Heteroaromatic compound
  • Ether
  • Organoheterocyclic compound
  • Oxacycle
  • Organic oxygen compound
  • Organic oxide
  • Organooxygen compound
  • Hydrocarbon derivative
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
Role
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point165 °CNot Available
Boiling PointNot AvailableNot Available
Water Solubility0.57 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.014 g/LALOGPS
logP3.81ALOGPS
logP4.16ChemAxon
logS-4.4ALOGPS
pKa (Strongest Acidic)7.99ChemAxon
pKa (Strongest Basic)-4.8ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area96.22 ŲChemAxon
Rotatable Bond Count4ChemAxon
Refractivity102.94 m³·mol⁻¹ChemAxon
Polarizability38.79 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+192.15830932474
DeepCCS[M-H]-189.830932474
DeepCCS[M-2H]-223.81130932474
DeepCCS[M+Na]+198.99730932474
AllCCS[M+H]+186.532859911
AllCCS[M+H-H2O]+183.432859911
AllCCS[M+NH4]+189.332859911
AllCCS[M+Na]+190.132859911
AllCCS[M-H]-187.332859911
AllCCS[M+Na-2H]-186.632859911
AllCCS[M+HCOO]-185.932859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
IntegrinCOC1=CC(O)=C2C(=O)C(CC=C(C)C)=C(OC2=C1)C1=C(O)C=C(O)C=C15173.0Standard polar33892256
IntegrinCOC1=CC(O)=C2C(=O)C(CC=C(C)C)=C(OC2=C1)C1=C(O)C=C(O)C=C13342.1Standard non polar33892256
IntegrinCOC1=CC(O)=C2C(=O)C(CC=C(C)C)=C(OC2=C1)C1=C(O)C=C(O)C=C13396.9Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Integrin,1TMS,isomer #1COC1=CC(O[Si](C)(C)C)=C2C(=O)C(CC=C(C)C)=C(C3=CC=C(O)C=C3O)OC2=C13270.1Semi standard non polar33892256
Integrin,1TMS,isomer #2COC1=CC(O)=C2C(=O)C(CC=C(C)C)=C(C3=CC=C(O)C=C3O[Si](C)(C)C)OC2=C13274.8Semi standard non polar33892256
Integrin,1TMS,isomer #3COC1=CC(O)=C2C(=O)C(CC=C(C)C)=C(C3=CC=C(O[Si](C)(C)C)C=C3O)OC2=C13302.6Semi standard non polar33892256
Integrin,2TMS,isomer #1COC1=CC(O[Si](C)(C)C)=C2C(=O)C(CC=C(C)C)=C(C3=CC=C(O[Si](C)(C)C)C=C3O)OC2=C13159.0Semi standard non polar33892256
Integrin,2TMS,isomer #2COC1=CC(O[Si](C)(C)C)=C2C(=O)C(CC=C(C)C)=C(C3=CC=C(O)C=C3O[Si](C)(C)C)OC2=C13145.4Semi standard non polar33892256
Integrin,2TMS,isomer #3COC1=CC(O)=C2C(=O)C(CC=C(C)C)=C(C3=CC=C(O[Si](C)(C)C)C=C3O[Si](C)(C)C)OC2=C13173.4Semi standard non polar33892256
Integrin,3TMS,isomer #1COC1=CC(O[Si](C)(C)C)=C2C(=O)C(CC=C(C)C)=C(C3=CC=C(O[Si](C)(C)C)C=C3O[Si](C)(C)C)OC2=C13129.6Semi standard non polar33892256
Integrin,1TBDMS,isomer #1COC1=CC(O[Si](C)(C)C(C)(C)C)=C2C(=O)C(CC=C(C)C)=C(C3=CC=C(O)C=C3O)OC2=C13524.7Semi standard non polar33892256
Integrin,1TBDMS,isomer #2COC1=CC(O)=C2C(=O)C(CC=C(C)C)=C(C3=CC=C(O)C=C3O[Si](C)(C)C(C)(C)C)OC2=C13519.1Semi standard non polar33892256
Integrin,1TBDMS,isomer #3COC1=CC(O)=C2C(=O)C(CC=C(C)C)=C(C3=CC=C(O[Si](C)(C)C(C)(C)C)C=C3O)OC2=C13552.1Semi standard non polar33892256
Integrin,2TBDMS,isomer #1COC1=CC(O[Si](C)(C)C(C)(C)C)=C2C(=O)C(CC=C(C)C)=C(C3=CC=C(O[Si](C)(C)C(C)(C)C)C=C3O)OC2=C13658.9Semi standard non polar33892256
Integrin,2TBDMS,isomer #2COC1=CC(O[Si](C)(C)C(C)(C)C)=C2C(=O)C(CC=C(C)C)=C(C3=CC=C(O)C=C3O[Si](C)(C)C(C)(C)C)OC2=C13617.5Semi standard non polar33892256
Integrin,2TBDMS,isomer #3COC1=CC(O)=C2C(=O)C(CC=C(C)C)=C(C3=CC=C(O[Si](C)(C)C(C)(C)C)C=C3O[Si](C)(C)C(C)(C)C)OC2=C13673.6Semi standard non polar33892256
Integrin,3TBDMS,isomer #1COC1=CC(O[Si](C)(C)C(C)(C)C)=C2C(=O)C(CC=C(C)C)=C(C3=CC=C(O[Si](C)(C)C(C)(C)C)C=C3O[Si](C)(C)C(C)(C)C)OC2=C13801.1Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Integrin GC-MS (Non-derivatized) - 70eV, Positivesplash10-0udu-1129000000-527700be638ccf7018c92017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Integrin GC-MS (3 TMS) - 70eV, Positivesplash10-01b9-1000090000-3d9e6531e3d1eaa98b7e2017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Integrin GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Integrin GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Integrin 10V, Positive-QTOFsplash10-014i-0009000000-f9c0146621541a928c292016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Integrin 20V, Positive-QTOFsplash10-02t9-2019000000-e72df4df8b34544e116c2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Integrin 40V, Positive-QTOFsplash10-00mo-3391000000-aa0ef5aede901b3b1ef62016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Integrin 10V, Negative-QTOFsplash10-014i-0009000000-0d19b5cfd2258b2395192016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Integrin 20V, Negative-QTOFsplash10-014i-0019000000-c79bbffff0a9c0206dca2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Integrin 40V, Negative-QTOFsplash10-0a4i-4966000000-ba56920a3ac850dc2cf92016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Integrin 10V, Positive-QTOFsplash10-014i-0009000000-c82ef03305a7d347ebd02021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Integrin 20V, Positive-QTOFsplash10-014i-0009000000-c82ef03305a7d347ebd02021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Integrin 40V, Positive-QTOFsplash10-014i-0945000000-a52e44f5a90efad6ad3f2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Integrin 10V, Negative-QTOFsplash10-014i-0009000000-b72452bff984d43ed6ad2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Integrin 20V, Negative-QTOFsplash10-014i-0009000000-b72452bff984d43ed6ad2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Integrin 40V, Negative-QTOFsplash10-014l-0692000000-ccefd92ded50662bee702021-09-22Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB000618
KNApSAcK IDC00004031
Chemspider ID24843901
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkIntegrin
METLIN IDNot Available
PubChem Compound44258291
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1809871
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Cai W, Niu G, Chen X: Imaging of integrins as biomarkers for tumor angiogenesis. Curr Pharm Des. 2008;14(28):2943-73. [PubMed:18991712 ]
  2. Suryakumar G, Kasiganesan H, Balasubramanian S, Kuppuswamy D: Lack of beta3 integrin signaling contributes to calpain-mediated myocardial cell loss in pressure-overloaded myocardium. J Cardiovasc Pharmacol. 2010 Jun;55(6):567-73. doi: 10.1097/FJC.0b013e3181d9f5d4. [PubMed:20224428 ]
  3. Feng X, Clark RA, Galanakis D, Tonnesen MG: Fibrin and collagen differentially regulate human dermal microvascular endothelial cell integrins: stabilization of alphav/beta3 mRNA by fibrin1. J Invest Dermatol. 1999 Dec;113(6):913-9. [PubMed:10594730 ]
  4. Gorski A, Kardasiewicz H, Wyzgal J, Durlik M: Diminished integrin expression on granulocytes from renal allograft recipients. Arch Immunol Ther Exp (Warsz). 1992;40(1):71-4. [PubMed:1362491 ]
  5. Gary DS, Mattson MP: Integrin signaling via the PI3-kinase-Akt pathway increases neuronal resistance to glutamate-induced apoptosis. J Neurochem. 2001 Mar;76(5):1485-96. [PubMed:11238733 ]
  6. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .