Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:32:49 UTC
Update Date2022-03-07 02:52:18 UTC
HMDB IDHMDB0029816
Secondary Accession Numbers
  • HMDB29816
Metabolite Identification
Common NameCardanoldiene
DescriptionCardanoldiene belongs to the class of organic compounds known as 1-hydroxy-4-unsubstituted benzenoids. These are phenols that are unsubstituted at the 4-position. Based on a literature review very few articles have been published on Cardanoldiene.
Structure
Data?1582753469
Synonyms
ValueSource
2-[(7Z,12E)-Pentadeca-7,12-dien-5-yl]phenolHMDB
3-(8,11-Pentadecadienyl)phenolHMDB
Chemical FormulaC21H32O
Average Molecular Weight300.4782
Monoisotopic Molecular Weight300.245315646
IUPAC Name3-[(8E,11E)-pentadeca-8,11-dien-1-yl]phenol
Traditional Name3-[(8E,11E)-pentadeca-8,11-dien-1-yl]phenol
CAS Registry Number51546-63-5
SMILES
CCC\C=C\C\C=C\CCCCCCCC1=CC=CC(O)=C1
InChI Identifier
InChI=1S/C21H32O/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-16-20-17-15-18-21(22)19-20/h4-5,7-8,15,17-19,22H,2-3,6,9-14,16H2,1H3/b5-4+,8-7+
InChI KeyFAYVLNWNMNHXGA-AOSYACOCSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as 1-hydroxy-4-unsubstituted benzenoids. These are phenols that are unsubstituted at the 4-position.
KingdomOrganic compounds
Super ClassBenzenoids
ClassPhenols
Sub Class1-hydroxy-4-unsubstituted benzenoids
Direct Parent1-hydroxy-4-unsubstituted benzenoids
Alternative Parents
Substituents
  • 1-hydroxy-4-unsubstituted benzenoid
  • 1-hydroxy-2-unsubstituted benzenoid
  • Monocyclic benzene moiety
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Organooxygen compound
  • Aromatic homomonocyclic compound
Molecular FrameworkAromatic homomonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water Solubility0.0025 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility6.0e-05 g/LALOGPS
logP8.11ALOGPS
logP7.68ChemAxon
logS-6.7ALOGPS
pKa (Strongest Acidic)10.11ChemAxon
pKa (Strongest Basic)-5.5ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area20.23 ŲChemAxon
Rotatable Bond Count12ChemAxon
Refractivity99.73 m³·mol⁻¹ChemAxon
Polarizability38.29 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+183.14331661259
DarkChem[M-H]-182.82431661259
DeepCCS[M+H]+184.23130932474
DeepCCS[M-H]-181.87330932474
DeepCCS[M-2H]-214.7630932474
DeepCCS[M+Na]+190.32430932474
AllCCS[M+H]+182.732859911
AllCCS[M+H-H2O]+179.632859911
AllCCS[M+NH4]+185.632859911
AllCCS[M+Na]+186.532859911
AllCCS[M-H]-185.032859911
AllCCS[M+Na-2H]-186.432859911
AllCCS[M+HCOO]-188.132859911

Predicted Retention Times

Underivatized

Chromatographic MethodRetention TimeReference
Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. Predicted by Afia on May 17, 2022.10.55 minutes32390414
Predicted by Siyang on May 30, 202227.2684 minutes33406817
Predicted by Siyang using ReTip algorithm on June 8, 20221.68 minutes32390414
AjsUoB = Accucore 150 Amide HILIC with 10mM Ammonium Formate, 0.1% Formic Acid37.4 seconds40023050
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid3278.4 seconds40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid797.6 seconds40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid319.3 seconds40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid531.2 seconds40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid734.6 seconds40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid1351.5 seconds40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid912.7 seconds40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)99.1 seconds40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid2554.8 seconds40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid873.3 seconds40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid2157.0 seconds40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid932.9 seconds40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid627.2 seconds40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate608.9 seconds40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA612.4 seconds40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water8.5 seconds40023050

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
CardanoldieneCCC\C=C\C\C=C\CCCCCCCC1=CC=CC(O)=C13358.8Standard polar33892256
CardanoldieneCCC\C=C\C\C=C\CCCCCCCC1=CC=CC(O)=C12365.6Standard non polar33892256
CardanoldieneCCC\C=C\C\C=C\CCCCCCCC1=CC=CC(O)=C12488.9Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Cardanoldiene,1TMS,isomer #1CCC/C=C/C/C=C/CCCCCCCC1=CC=CC(O[Si](C)(C)C)=C12465.8Semi standard non polar33892256
Cardanoldiene,1TBDMS,isomer #1CCC/C=C/C/C=C/CCCCCCCC1=CC=CC(O[Si](C)(C)C(C)(C)C)=C12715.3Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Cardanoldiene GC-MS (Non-derivatized) - 70eV, Positivesplash10-00di-2910000000-d15b9d12a4814820b78c2017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Cardanoldiene GC-MS (1 TMS) - 70eV, Positivesplash10-0adi-4934000000-5d145819108c3d6065632017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Cardanoldiene GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Cardanoldiene GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cardanoldiene 10V, Positive-QTOFsplash10-0udi-1119000000-1d3f495ca7d83ab5f06a2016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cardanoldiene 20V, Positive-QTOFsplash10-0udl-6983000000-3c3eed796f81a40a33672016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cardanoldiene 40V, Positive-QTOFsplash10-0006-9850000000-459e14aedda2d794b1fc2016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cardanoldiene 10V, Negative-QTOFsplash10-0002-0090000000-d7ed4281b33f1e8ac1e42016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cardanoldiene 20V, Negative-QTOFsplash10-0002-0090000000-77f991b825f3a46161d42016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cardanoldiene 40V, Negative-QTOFsplash10-0a5c-3490000000-912baab9699b6385047f2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cardanoldiene 10V, Negative-QTOFsplash10-0002-0090000000-afa15456ba65f9cea8662021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cardanoldiene 20V, Negative-QTOFsplash10-0002-0090000000-3ca65ef6ef3af821f7662021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cardanoldiene 40V, Negative-QTOFsplash10-014i-3930000000-6a2d848a815bf6214f112021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cardanoldiene 10V, Positive-QTOFsplash10-0udi-3319000000-690e33edffdc9dc2a0c02021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cardanoldiene 20V, Positive-QTOFsplash10-0pwc-9421000000-1f98969c798e1ae71ed32021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cardanoldiene 40V, Positive-QTOFsplash10-05ox-9300000000-c729a96777434f8963bb2021-09-25Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB001027
KNApSAcK IDC00054118
Chemspider ID4511906
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound5356113
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1811541
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .