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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:37:43 UTC
Update Date2022-03-07 02:52:36 UTC
HMDB IDHMDB0030573
Secondary Accession Numbers
  • HMDB30573
Metabolite Identification
Common NameSanshodiol
DescriptionSanshodiol belongs to the class of organic compounds known as 7,9'-epoxylignans. These are lignans that contain the 7,9'-epoxylignan skeleton, which consists of a tetrahydrofuran that carries a phenyl group, a methyl group, and a benzyl group at the 2-, 3-, 4-position, respectively. Based on a literature review very few articles have been published on Sanshodiol.
Structure
Data?1563862006
Synonyms
ValueSource
(5-Chloro-2-hydroxyphenyl)acetic acidHMDB
4,9-Dihydroxy-3-methoxy-3',4'-methylenedioxy-7,9'-epoxylignanHMDB
Chemical FormulaC20H22O6
Average Molecular Weight358.3851
Monoisotopic Molecular Weight358.141638436
IUPAC Name4-[4-(2H-1,3-benzodioxol-5-ylmethyl)-3-(hydroxymethyl)oxolan-2-yl]-2-methoxyphenol
Traditional Name4-[4-(2H-1,3-benzodioxol-5-ylmethyl)-3-(hydroxymethyl)oxolan-2-yl]-2-methoxyphenol
CAS Registry Number54854-91-0
SMILES
COC1=C(O)C=CC(=C1)C1OCC(CC2=CC3=C(OCO3)C=C2)C1CO
InChI Identifier
InChI=1S/C20H22O6/c1-23-18-8-13(3-4-16(18)22)20-15(9-21)14(10-24-20)6-12-2-5-17-19(7-12)26-11-25-17/h2-5,7-8,14-15,20-22H,6,9-11H2,1H3
InChI KeyGRYMYKQGSSTJBA-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as 7,9'-epoxylignans. These are lignans that contain the 7,9'-epoxylignan skeleton, which consists of a tetrahydrofuran that carries a phenyl group, a methyl group, and a benzyl group at the 2-, 3-, 4-position, respectively.
KingdomOrganic compounds
Super ClassLignans, neolignans and related compounds
ClassFuranoid lignans
Sub ClassTetrahydrofuran lignans
Direct Parent7,9'-epoxylignans
Alternative Parents
Substituents
  • 7,9p-epoxylignan
  • Methoxyphenol
  • Benzodioxole
  • Anisole
  • Phenoxy compound
  • Phenol ether
  • Methoxybenzene
  • 1-hydroxy-2-unsubstituted benzenoid
  • Phenol
  • Alkyl aryl ether
  • Benzenoid
  • Monocyclic benzene moiety
  • Tetrahydrofuran
  • Oxacycle
  • Acetal
  • Organoheterocyclic compound
  • Dialkyl ether
  • Ether
  • Organic oxygen compound
  • Alcohol
  • Hydrocarbon derivative
  • Primary alcohol
  • Organooxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point140 - 141 °CNot Available
Boiling PointNot AvailableNot Available
Water Solubility43.8 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.044 g/LALOGPS
logP2.04ALOGPS
logP2.39ChemAxon
logS-3.9ALOGPS
pKa (Strongest Acidic)9.91ChemAxon
pKa (Strongest Basic)-2.6ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area77.38 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity94.52 m³·mol⁻¹ChemAxon
Polarizability37.91 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+185.83731661259
DarkChem[M-H]-182.92231661259
DeepCCS[M+H]+184.59130932474
DeepCCS[M-H]-182.02630932474
DeepCCS[M-2H]-216.56930932474
DeepCCS[M+Na]+192.39430932474
AllCCS[M+H]+186.832859911
AllCCS[M+H-H2O]+183.732859911
AllCCS[M+NH4]+189.732859911
AllCCS[M+Na]+190.532859911
AllCCS[M-H]-189.532859911
AllCCS[M+Na-2H]-189.532859911
AllCCS[M+HCOO]-189.632859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
SanshodiolCOC1=C(O)C=CC(=C1)C1OCC(CC2=CC3=C(OCO3)C=C2)C1CO3896.4Standard polar33892256
SanshodiolCOC1=C(O)C=CC(=C1)C1OCC(CC2=CC3=C(OCO3)C=C2)C1CO3020.4Standard non polar33892256
SanshodiolCOC1=C(O)C=CC(=C1)C1OCC(CC2=CC3=C(OCO3)C=C2)C1CO3222.2Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Sanshodiol,1TMS,isomer #1COC1=CC(C2OCC(CC3=CC=C4OCOC4=C3)C2CO)=CC=C1O[Si](C)(C)C3074.0Semi standard non polar33892256
Sanshodiol,1TMS,isomer #2COC1=CC(C2OCC(CC3=CC=C4OCOC4=C3)C2CO[Si](C)(C)C)=CC=C1O3063.5Semi standard non polar33892256
Sanshodiol,2TMS,isomer #1COC1=CC(C2OCC(CC3=CC=C4OCOC4=C3)C2CO[Si](C)(C)C)=CC=C1O[Si](C)(C)C3082.7Semi standard non polar33892256
Sanshodiol,1TBDMS,isomer #1COC1=CC(C2OCC(CC3=CC=C4OCOC4=C3)C2CO)=CC=C1O[Si](C)(C)C(C)(C)C3329.1Semi standard non polar33892256
Sanshodiol,1TBDMS,isomer #2COC1=CC(C2OCC(CC3=CC=C4OCOC4=C3)C2CO[Si](C)(C)C(C)(C)C)=CC=C1O3329.0Semi standard non polar33892256
Sanshodiol,2TBDMS,isomer #1COC1=CC(C2OCC(CC3=CC=C4OCOC4=C3)C2CO[Si](C)(C)C(C)(C)C)=CC=C1O[Si](C)(C)C(C)(C)C3570.3Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Sanshodiol GC-MS (Non-derivatized) - 70eV, Positivesplash10-002r-0915000000-c65b502778405c67b0b82017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Sanshodiol GC-MS (2 TMS) - 70eV, Positivesplash10-0079-3614900000-decff1b683248fcdb0202017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Sanshodiol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Sanshodiol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sanshodiol 10V, Positive-QTOFsplash10-0a4l-0119000000-0973db979ab10f8cd4b42015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sanshodiol 20V, Positive-QTOFsplash10-052f-0479000000-5a297bf64bddd8311db02015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sanshodiol 40V, Positive-QTOFsplash10-01r6-1900000000-d697d07bd006fa5fb3a52015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sanshodiol 10V, Negative-QTOFsplash10-0a4i-0009000000-1bbfab0937ac8c3b7c4d2015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sanshodiol 20V, Negative-QTOFsplash10-0a70-0019000000-2c0e7d81516c2f2271c82015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sanshodiol 40V, Negative-QTOFsplash10-0h2u-2922000000-bd059dcc8fe5d185716c2015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sanshodiol 10V, Positive-QTOFsplash10-0a4i-0109000000-8fd4cfea26a15698db1f2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sanshodiol 20V, Positive-QTOFsplash10-052r-0849000000-3231d0db4af7fd99ac1c2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sanshodiol 40V, Positive-QTOFsplash10-000i-0922000000-9bed0b5b21b563e0a95d2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sanshodiol 10V, Negative-QTOFsplash10-0a6r-0009000000-3a9c7b03e710a983f95a2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sanshodiol 20V, Negative-QTOFsplash10-0a6r-0129000000-f9b40bb6aea1ce08318d2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sanshodiol 40V, Negative-QTOFsplash10-0a4i-2439000000-6d6c0b73c8d7b52f87062021-09-23Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Extracellular
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB002461
KNApSAcK IDC00057434
Chemspider ID35013228
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound14237706
PDB IDNot Available
ChEBI ID175604
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1821131
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .