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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:37:51 UTC
Update Date2022-03-07 02:52:37 UTC
HMDB IDHMDB0030596
Secondary Accession Numbers
  • HMDB30596
Metabolite Identification
Common NameUgaxanthone
DescriptionUgaxanthone belongs to the class of organic compounds known as 4-prenylated xanthones. These are organic compounds containing a C5-isoprenoid group linked to a xanthone moiety at the 4-position. Xanthone is a tricyclic compound made up of two benzene rings linearly fused to each other through a pyran ring that carries a ketone group. Based on a literature review very few articles have been published on Ugaxanthone.
Structure
Data?1563862009
Synonyms
ValueSource
1,3,5,6-Tetrahydroxy-4-(3-methyl-2-butenyl)-9H-xanthen-9-one, 9ciHMDB
Chemical FormulaC18H16O6
Average Molecular Weight328.316
Monoisotopic Molecular Weight328.094688244
IUPAC Name1,3,5,6-tetrahydroxy-4-(3-methylbut-2-en-1-yl)-9H-xanthen-9-one
Traditional Name1,3,5,6-tetrahydroxy-4-(3-methylbut-2-en-1-yl)xanthen-9-one
CAS Registry Number13179-11-8
SMILES
CC(C)=CCC1=C2OC3=C(C=CC(O)=C3O)C(=O)C2=C(O)C=C1O
InChI Identifier
InChI=1S/C18H16O6/c1-8(2)3-4-9-12(20)7-13(21)14-15(22)10-5-6-11(19)16(23)18(10)24-17(9)14/h3,5-7,19-21,23H,4H2,1-2H3
InChI KeyZZUFNBISWJNCEE-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as 4-prenylated xanthones. These are organic compounds containing a C5-isoprenoid group linked to a xanthone moiety at the 4-position. Xanthone is a tricyclic compound made up of two benzene rings linearly fused to each other through a pyran ring that carries a ketone group.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassBenzopyrans
Sub Class1-benzopyrans
Direct Parent4-prenylated xanthones
Alternative Parents
Substituents
  • 4-prenylated xanthone
  • Chromone
  • 1-hydroxy-4-unsubstituted benzenoid
  • 1-hydroxy-2-unsubstituted benzenoid
  • Pyranone
  • Pyran
  • Benzenoid
  • Heteroaromatic compound
  • Vinylogous acid
  • Polyol
  • Oxacycle
  • Hydrocarbon derivative
  • Organic oxide
  • Organooxygen compound
  • Organic oxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.077 g/LALOGPS
logP2.93ALOGPS
logP4.12ChemAxon
logS-3.6ALOGPS
pKa (Strongest Acidic)7.18ChemAxon
pKa (Strongest Basic)-4.2ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count4ChemAxon
Polar Surface Area107.22 ŲChemAxon
Rotatable Bond Count2ChemAxon
Refractivity88.98 m³·mol⁻¹ChemAxon
Polarizability33.42 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+179.48530932474
DeepCCS[M-H]-177.12730932474
DeepCCS[M-2H]-211.15830932474
DeepCCS[M+Na]+186.38530932474
AllCCS[M+H]+175.632859911
AllCCS[M+H-H2O]+172.232859911
AllCCS[M+NH4]+178.832859911
AllCCS[M+Na]+179.732859911
AllCCS[M-H]-176.732859911
AllCCS[M+Na-2H]-176.032859911
AllCCS[M+HCOO]-175.432859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
UgaxanthoneCC(C)=CCC1=C2OC3=C(C=CC(O)=C3O)C(=O)C2=C(O)C=C1O4741.6Standard polar33892256
UgaxanthoneCC(C)=CCC1=C2OC3=C(C=CC(O)=C3O)C(=O)C2=C(O)C=C1O3191.0Standard non polar33892256
UgaxanthoneCC(C)=CCC1=C2OC3=C(C=CC(O)=C3O)C(=O)C2=C(O)C=C1O3146.2Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Ugaxanthone,1TMS,isomer #1CC(C)=CCC1=C(O)C=C(O)C2=C1OC1=C(O)C(O[Si](C)(C)C)=CC=C1C2=O3296.4Semi standard non polar33892256
Ugaxanthone,1TMS,isomer #2CC(C)=CCC1=C(O)C=C(O)C2=C1OC1=C(O[Si](C)(C)C)C(O)=CC=C1C2=O3218.5Semi standard non polar33892256
Ugaxanthone,1TMS,isomer #3CC(C)=CCC1=C(O)C=C(O[Si](C)(C)C)C2=C1OC1=C(O)C(O)=CC=C1C2=O3254.2Semi standard non polar33892256
Ugaxanthone,1TMS,isomer #4CC(C)=CCC1=C(O[Si](C)(C)C)C=C(O)C2=C1OC1=C(O)C(O)=CC=C1C2=O3232.3Semi standard non polar33892256
Ugaxanthone,2TMS,isomer #1CC(C)=CCC1=C(O[Si](C)(C)C)C=C(O)C2=C1OC1=C(O)C(O[Si](C)(C)C)=CC=C1C2=O3137.6Semi standard non polar33892256
Ugaxanthone,2TMS,isomer #2CC(C)=CCC1=C(O)C=C(O[Si](C)(C)C)C2=C1OC1=C(O)C(O[Si](C)(C)C)=CC=C1C2=O3177.1Semi standard non polar33892256
Ugaxanthone,2TMS,isomer #3CC(C)=CCC1=C(O)C=C(O)C2=C1OC1=C(O[Si](C)(C)C)C(O[Si](C)(C)C)=CC=C1C2=O3128.4Semi standard non polar33892256
Ugaxanthone,2TMS,isomer #4CC(C)=CCC1=C(O[Si](C)(C)C)C=C(O)C2=C1OC1=C(O[Si](C)(C)C)C(O)=CC=C1C2=O3093.0Semi standard non polar33892256
Ugaxanthone,2TMS,isomer #5CC(C)=CCC1=C(O)C=C(O[Si](C)(C)C)C2=C1OC1=C(O[Si](C)(C)C)C(O)=CC=C1C2=O3128.1Semi standard non polar33892256
Ugaxanthone,2TMS,isomer #6CC(C)=CCC1=C(O[Si](C)(C)C)C=C(O[Si](C)(C)C)C2=C1OC1=C(O)C(O)=CC=C1C2=O3117.1Semi standard non polar33892256
Ugaxanthone,3TMS,isomer #1CC(C)=CCC1=C(O[Si](C)(C)C)C=C(O[Si](C)(C)C)C2=C1OC1=C(O)C(O[Si](C)(C)C)=CC=C1C2=O3079.7Semi standard non polar33892256
Ugaxanthone,3TMS,isomer #2CC(C)=CCC1=C(O[Si](C)(C)C)C=C(O)C2=C1OC1=C(O[Si](C)(C)C)C(O[Si](C)(C)C)=CC=C1C2=O3037.8Semi standard non polar33892256
Ugaxanthone,3TMS,isomer #3CC(C)=CCC1=C(O)C=C(O[Si](C)(C)C)C2=C1OC1=C(O[Si](C)(C)C)C(O[Si](C)(C)C)=CC=C1C2=O3068.8Semi standard non polar33892256
Ugaxanthone,3TMS,isomer #4CC(C)=CCC1=C(O[Si](C)(C)C)C=C(O[Si](C)(C)C)C2=C1OC1=C(O[Si](C)(C)C)C(O)=CC=C1C2=O3060.0Semi standard non polar33892256
Ugaxanthone,4TMS,isomer #1CC(C)=CCC1=C(O[Si](C)(C)C)C=C(O[Si](C)(C)C)C2=C1OC1=C(O[Si](C)(C)C)C(O[Si](C)(C)C)=CC=C1C2=O3055.0Semi standard non polar33892256
Ugaxanthone,1TBDMS,isomer #1CC(C)=CCC1=C(O)C=C(O)C2=C1OC1=C(O)C(O[Si](C)(C)C(C)(C)C)=CC=C1C2=O3545.3Semi standard non polar33892256
Ugaxanthone,1TBDMS,isomer #2CC(C)=CCC1=C(O)C=C(O)C2=C1OC1=C(O[Si](C)(C)C(C)(C)C)C(O)=CC=C1C2=O3467.9Semi standard non polar33892256
Ugaxanthone,1TBDMS,isomer #3CC(C)=CCC1=C(O)C=C(O[Si](C)(C)C(C)(C)C)C2=C1OC1=C(O)C(O)=CC=C1C2=O3513.3Semi standard non polar33892256
Ugaxanthone,1TBDMS,isomer #4CC(C)=CCC1=C(O[Si](C)(C)C(C)(C)C)C=C(O)C2=C1OC1=C(O)C(O)=CC=C1C2=O3482.8Semi standard non polar33892256
Ugaxanthone,2TBDMS,isomer #1CC(C)=CCC1=C(O[Si](C)(C)C(C)(C)C)C=C(O)C2=C1OC1=C(O)C(O[Si](C)(C)C(C)(C)C)=CC=C1C2=O3628.8Semi standard non polar33892256
Ugaxanthone,2TBDMS,isomer #2CC(C)=CCC1=C(O)C=C(O[Si](C)(C)C(C)(C)C)C2=C1OC1=C(O)C(O[Si](C)(C)C(C)(C)C)=CC=C1C2=O3661.6Semi standard non polar33892256
Ugaxanthone,2TBDMS,isomer #3CC(C)=CCC1=C(O)C=C(O)C2=C1OC1=C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)=CC=C1C2=O3625.4Semi standard non polar33892256
Ugaxanthone,2TBDMS,isomer #4CC(C)=CCC1=C(O[Si](C)(C)C(C)(C)C)C=C(O)C2=C1OC1=C(O[Si](C)(C)C(C)(C)C)C(O)=CC=C1C2=O3579.1Semi standard non polar33892256
Ugaxanthone,2TBDMS,isomer #5CC(C)=CCC1=C(O)C=C(O[Si](C)(C)C(C)(C)C)C2=C1OC1=C(O[Si](C)(C)C(C)(C)C)C(O)=CC=C1C2=O3614.9Semi standard non polar33892256
Ugaxanthone,2TBDMS,isomer #6CC(C)=CCC1=C(O[Si](C)(C)C(C)(C)C)C=C(O[Si](C)(C)C(C)(C)C)C2=C1OC1=C(O)C(O)=CC=C1C2=O3620.8Semi standard non polar33892256
Ugaxanthone,3TBDMS,isomer #1CC(C)=CCC1=C(O[Si](C)(C)C(C)(C)C)C=C(O[Si](C)(C)C(C)(C)C)C2=C1OC1=C(O)C(O[Si](C)(C)C(C)(C)C)=CC=C1C2=O3812.3Semi standard non polar33892256
Ugaxanthone,3TBDMS,isomer #2CC(C)=CCC1=C(O[Si](C)(C)C(C)(C)C)C=C(O)C2=C1OC1=C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)=CC=C1C2=O3715.2Semi standard non polar33892256
Ugaxanthone,3TBDMS,isomer #3CC(C)=CCC1=C(O)C=C(O[Si](C)(C)C(C)(C)C)C2=C1OC1=C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)=CC=C1C2=O3757.5Semi standard non polar33892256
Ugaxanthone,3TBDMS,isomer #4CC(C)=CCC1=C(O[Si](C)(C)C(C)(C)C)C=C(O[Si](C)(C)C(C)(C)C)C2=C1OC1=C(O[Si](C)(C)C(C)(C)C)C(O)=CC=C1C2=O3762.7Semi standard non polar33892256
Ugaxanthone,4TBDMS,isomer #1CC(C)=CCC1=C(O[Si](C)(C)C(C)(C)C)C=C(O[Si](C)(C)C(C)(C)C)C2=C1OC1=C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)=CC=C1C2=O3870.5Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Ugaxanthone GC-MS (Non-derivatized) - 70eV, Positivesplash10-0gvy-3295000000-7c79fad260dad29a1a232017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ugaxanthone GC-MS (4 TMS) - 70eV, Positivesplash10-0udi-1000059000-875a46237cb5550765362017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ugaxanthone GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ugaxanthone 10V, Positive-QTOFsplash10-004i-0029000000-0d055b37d5db3d762a412016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ugaxanthone 20V, Positive-QTOFsplash10-0100-3095000000-613ddff7067532ec9ac62016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ugaxanthone 40V, Positive-QTOFsplash10-014i-9380000000-a4d3c007c1e5285db3a12016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ugaxanthone 10V, Negative-QTOFsplash10-004i-0009000000-b4564b16b7fcba4361c92016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ugaxanthone 20V, Negative-QTOFsplash10-004i-0139000000-b9261e97583697f25d9c2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ugaxanthone 40V, Negative-QTOFsplash10-0a4i-2940000000-746dd81f8d647b379d1d2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ugaxanthone 10V, Negative-QTOFsplash10-004i-0009000000-0447e52768356e4438812021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ugaxanthone 20V, Negative-QTOFsplash10-004i-0019000000-2da45c9e00789e9d727c2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ugaxanthone 40V, Negative-QTOFsplash10-06dl-0691000000-f98f58f7e01d05895fc72021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ugaxanthone 10V, Positive-QTOFsplash10-00b9-0079000000-614152e47caedaec4a122021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ugaxanthone 20V, Positive-QTOFsplash10-00di-0091000000-213d7430dbd9b19b05392021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ugaxanthone 40V, Positive-QTOFsplash10-05n0-3690000000-0b45b43aa09a74a01ebd2021-09-24Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB002490
KNApSAcK IDC00037514
Chemspider ID4479504
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound5321880
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .