Hmdb loader
Survey
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:38:25 UTC
Update Date2022-03-07 02:52:39 UTC
HMDB IDHMDB0030687
Secondary Accession Numbers
  • HMDB30687
Metabolite Identification
Common NameCyclomorusin
DescriptionCyclomorusin belongs to the class of organic compounds known as pyranoflavonoids. Pyranoflavonoids are compounds containing a pyran ring fused to a 2-phenyl-1,4-benzopyran skeleton. Thus, cyclomorusin is considered to be a flavonoid. Cyclomorusin has been detected, but not quantified in, breadfruits (Artocarpus altilis) and fruits. This could make cyclomorusin a potential biomarker for the consumption of these foods. Cyclomorusin is a secondary metabolite. Secondary metabolites are metabolically or physiologically non-essential metabolites that may serve a role as defense or signalling molecules. In some cases they are simply molecules that arise from the incomplete metabolism of other secondary metabolites. Based on a literature review a significant number of articles have been published on Cyclomorusin.
Structure
Data?1563862022
Synonyms
ValueSource
6,11-Dihydroxy-3,3-dimethyl-8-(2-methyl-1-propenyl)-3H,7H,8H-bis[1]benzopyrano[4,3-b:6',5'-e]pyran-7-oneHMDB
6,11-Dihydroxy-3,3-dimethyl-8-(2-methyl-1-propenyl)-3H,7H,8H-bis[1]benzopyrano[4,3-b:6',5'-e]pyran-7-one, 9ciHMDB
Cyclomorusin aHMDB
CyclomulberrochromeneHMDB
Chemical FormulaC25H22O6
Average Molecular Weight418.4386
Monoisotopic Molecular Weight418.141638436
IUPAC Name11,19-dihydroxy-7,7-dimethyl-15-(2-methylprop-1-en-1-yl)-2,8,16-trioxapentacyclo[12.8.0.0³,¹².0⁴,⁹.0¹⁷,²²]docosa-1(14),3(12),4(9),5,10,17(22),18,20-octaen-13-one
Traditional Namecyclomorusin
CAS Registry Number62596-34-3
SMILES
CC(C)=CC1OC2=C(C=CC(O)=C2)C2=C1C(=O)C1=C(O2)C2=C(OC(C)(C)C=C2)C=C1O
InChI Identifier
InChI=1S/C25H22O6/c1-12(2)9-19-21-22(28)20-16(27)11-18-15(7-8-25(3,4)31-18)23(20)30-24(21)14-6-5-13(26)10-17(14)29-19/h5-11,19,26-27H,1-4H3
InChI KeyGDQXJMLXEYSICD-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as pyranoflavonoids. Pyranoflavonoids are compounds containing a pyran ring fused to a 2-phenyl-1,4-benzopyran skeleton.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassFlavonoids
Sub ClassPyranoflavonoids
Direct ParentPyranoflavonoids
Alternative Parents
Substituents
  • Pyranoflavonoid
  • Pyranochromene
  • 2,2-dimethyl-1-benzopyran
  • Chromone
  • Benzopyran
  • 1-benzopyran
  • 1-hydroxy-2-unsubstituted benzenoid
  • Alkyl aryl ether
  • Pyranone
  • Pyran
  • Benzenoid
  • Heteroaromatic compound
  • Vinylogous acid
  • Ether
  • Oxacycle
  • Organoheterocyclic compound
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Organooxygen compound
  • Organic oxide
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point256 - 257 °CNot Available
Boiling PointNot AvailableNot Available
Water Solubility0.016 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.0055 g/LALOGPS
logP4.3ALOGPS
logP4.81ChemAxon
logS-4.9ALOGPS
pKa (Strongest Acidic)8.42ChemAxon
pKa (Strongest Basic)-4.6ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area85.22 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity118.45 m³·mol⁻¹ChemAxon
Polarizability45.13 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+198.98531661259
DarkChem[M-H]-195.28931661259
DeepCCS[M+H]+195.40130932474
DeepCCS[M-H]-193.00630932474
DeepCCS[M-2H]-225.94530932474
DeepCCS[M+Na]+201.31430932474
AllCCS[M+H]+201.532859911
AllCCS[M+H-H2O]+198.832859911
AllCCS[M+NH4]+204.132859911
AllCCS[M+Na]+204.832859911
AllCCS[M-H]-201.032859911
AllCCS[M+Na-2H]-200.632859911
AllCCS[M+HCOO]-200.332859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
CyclomorusinCC(C)=CC1OC2=C(C=CC(O)=C2)C2=C1C(=O)C1=C(O2)C2=C(OC(C)(C)C=C2)C=C1O5083.9Standard polar33892256
CyclomorusinCC(C)=CC1OC2=C(C=CC(O)=C2)C2=C1C(=O)C1=C(O2)C2=C(OC(C)(C)C=C2)C=C1O3514.8Standard non polar33892256
CyclomorusinCC(C)=CC1OC2=C(C=CC(O)=C2)C2=C1C(=O)C1=C(O2)C2=C(OC(C)(C)C=C2)C=C1O3831.3Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Cyclomorusin,1TMS,isomer #1CC(C)=CC1OC2=CC(O[Si](C)(C)C)=CC=C2C2=C1C(=O)C1=C(O)C=C3OC(C)(C)C=CC3=C1O23616.4Semi standard non polar33892256
Cyclomorusin,1TMS,isomer #2CC(C)=CC1OC2=CC(O)=CC=C2C2=C1C(=O)C1=C(O[Si](C)(C)C)C=C3OC(C)(C)C=CC3=C1O23600.4Semi standard non polar33892256
Cyclomorusin,2TMS,isomer #1CC(C)=CC1OC2=CC(O[Si](C)(C)C)=CC=C2C2=C1C(=O)C1=C(O[Si](C)(C)C)C=C3OC(C)(C)C=CC3=C1O23553.2Semi standard non polar33892256
Cyclomorusin,1TBDMS,isomer #1CC(C)=CC1OC2=CC(O[Si](C)(C)C(C)(C)C)=CC=C2C2=C1C(=O)C1=C(O)C=C3OC(C)(C)C=CC3=C1O23836.4Semi standard non polar33892256
Cyclomorusin,1TBDMS,isomer #2CC(C)=CC1OC2=CC(O)=CC=C2C2=C1C(=O)C1=C(O[Si](C)(C)C(C)(C)C)C=C3OC(C)(C)C=CC3=C1O23810.9Semi standard non polar33892256
Cyclomorusin,2TBDMS,isomer #1CC(C)=CC1OC2=CC(O[Si](C)(C)C(C)(C)C)=CC=C2C2=C1C(=O)C1=C(O[Si](C)(C)C(C)(C)C)C=C3OC(C)(C)C=CC3=C1O23978.8Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Cyclomorusin GC-MS (Non-derivatized) - 70eV, Positivesplash10-0udl-5484900000-9c42636be55abff068602017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Cyclomorusin GC-MS (2 TMS) - 70eV, Positivesplash10-0002-4361390000-c990954f5ce4e5821cfc2017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Cyclomorusin GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclomorusin 10V, Positive-QTOFsplash10-014i-1001900000-f73a2686012c257315e12016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclomorusin 20V, Positive-QTOFsplash10-03xr-2009500000-48d44245d95216342a2b2016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclomorusin 40V, Positive-QTOFsplash10-067l-9104000000-6f33223106ab7c45d7fd2016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclomorusin 10V, Negative-QTOFsplash10-014i-0001900000-c21f5b6b75e086dacbe02016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclomorusin 20V, Negative-QTOFsplash10-014i-1007900000-15e21879c2756f5cf25a2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclomorusin 40V, Negative-QTOFsplash10-053r-3559000000-9db52e1da601071460132016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclomorusin 10V, Positive-QTOFsplash10-014i-0000900000-05dfc1131f8b02e9e9472021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclomorusin 20V, Positive-QTOFsplash10-014i-0000900000-05dfc1131f8b02e9e9472021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclomorusin 40V, Positive-QTOFsplash10-014i-0091500000-0d10a6740d3052cdb5462021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclomorusin 10V, Negative-QTOFsplash10-014i-0000900000-0c2e3c045664a8c8905a2021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclomorusin 20V, Negative-QTOFsplash10-014i-0000900000-0c2e3c045664a8c8905a2021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclomorusin 40V, Negative-QTOFsplash10-014l-0190200000-765161ea5d98ac18c93b2021-09-25Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB002606
KNApSAcK IDC00004029
Chemspider ID4587697
KEGG Compound IDC17867
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound5481969
PDB IDNot Available
ChEBI ID132868
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1821961
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .

Enzymes

General function:
Involved in transferase activity, transferring hexosyl groups
Specific function:
UDPGT is of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds. This isoform glucuronidates bilirubin IX-alpha to form both the IX-alpha-C8 and IX-alpha-C12 monoconjugates and diconjugate. Is also able to catalyze the glucuronidation of 17beta-estradiol, 17alpha-ethinylestradiol, 1-hydroxypyrene, 4-methylumbelliferone, 1-naphthol, paranitrophenol, scopoletin, and umbelliferone.
Gene Name:
UGT1A1
Uniprot ID:
P22309
Molecular weight:
59590.91
Reactions
Cyclomorusin → 3,4,5-trihydroxy-6-{[19-hydroxy-7,7-dimethyl-15-(2-methylprop-1-en-1-yl)-13-oxo-2,8,16-trioxapentacyclo[12.8.0.0³,¹².0⁴,⁹.0¹⁷,²²]docosa-1(14),3,5,9,11,17(22),18,20-octaen-11-yl]oxy}oxane-2-carboxylic aciddetails
Cyclomorusin → 3,4,5-trihydroxy-6-{[11-hydroxy-7,7-dimethyl-15-(2-methylprop-1-en-1-yl)-13-oxo-2,8,16-trioxapentacyclo[12.8.0.0³,¹².0⁴,⁹.0¹⁷,²²]docosa-1(14),3(12),4(9),5,10,17(22),18,20-octaen-19-yl]oxy}oxane-2-carboxylic aciddetails