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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:41:06 UTC
Update Date2022-03-07 02:52:49 UTC
HMDB IDHMDB0031118
Secondary Accession Numbers
  • HMDB31118
Metabolite Identification
Common NameGlycerol 1,3-di-(9Z,12Z-octadecadienoate) 2-hexadecanoate
DescriptionGlycerol 1,3-di-(9Z,12Z-octadecadienoate) 2-hexadecanoate belongs to the class of organic compounds known as triacylglycerols. These are glycerides consisting of three fatty acid chains covalently bonded to a glycerol molecule through ester linkages. Based on a literature review a small amount of articles have been published on Glycerol 1,3-di-(9Z,12Z-octadecadienoate) 2-hexadecanoate.
Structure
Data?1563862084
Synonyms
ValueSource
Glycerol 1,3-di-(9Z,12Z-octadecadienoic acid) 2-hexadecanoic acidGenerator
4-chloro-5,6-Dihydroxy-indole-1-sulfonateHMDB
9,12-Octadecadienoic acid 2-[(1-oxohexadecyl)oxy]-1,3-propanediyl esterHMDB
a,A'-dilinoleopalmitinHMDB
BerulideHMDB
Glycerol 2-hexadecanoate 1,3-di-(9Z,12Z-octadecadienoate)HMDB
2-(Hexadecanoyloxy)-3-[(9E,12E)-octadeca-9,12-dienoyloxy]propyl (9E,12E)-octadeca-9,12-dienoic acidGenerator
Chemical FormulaC55H98O6
Average Molecular Weight855.363
Monoisotopic Molecular Weight854.736340868
IUPAC Name2-(hexadecanoyloxy)-3-[(9E,12E)-octadeca-9,12-dienoyloxy]propyl (9E,12E)-octadeca-9,12-dienoate
Traditional Name2-(hexadecanoyloxy)-3-[(9E,12E)-octadeca-9,12-dienoyloxy]propyl (9E,12E)-octadeca-9,12-dienoate
CAS Registry Number2190-16-1
SMILES
CCCCCCCCCCCCCCCC(=O)OC(COC(=O)CCCCCCC\C=C\C\C=C\CCCCC)COC(=O)CCCCCCC\C=C\C\C=C\CCCCC
InChI Identifier
InChI=1S/C55H98O6/c1-4-7-10-13-16-19-22-25-27-30-32-35-38-41-44-47-53(56)59-50-52(61-55(58)49-46-43-40-37-34-29-24-21-18-15-12-9-6-3)51-60-54(57)48-45-42-39-36-33-31-28-26-23-20-17-14-11-8-5-2/h16-17,19-20,25-28,52H,4-15,18,21-24,29-51H2,1-3H3/b19-16+,20-17+,27-25+,28-26+
InChI KeyKRVYYALDCAWYEF-OZBINYCYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as triacylglycerols. These are glycerides consisting of three fatty acid chains covalently bonded to a glycerol molecule through ester linkages.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassGlycerolipids
Sub ClassTriradylcglycerols
Direct ParentTriacylglycerols
Alternative Parents
Substituents
  • Triacyl-sn-glycerol
  • Octadecanoid
  • Tricarboxylic acid or derivatives
  • Fatty acid ester
  • Fatty acyl
  • Carboxylic acid ester
  • Carboxylic acid derivative
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Carbonyl group
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Ontology
Physiological effect
Disposition
Process
Role
Physical Properties
StateLiquid
Experimental Molecular Properties
PropertyValueReference
Melting Point-3 °CNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility6.7e-06 g/LALOGPS
logP10.75ALOGPS
logP19.25ChemAxon
logS-8.1ALOGPS
pKa (Strongest Basic)-6.6ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area78.9 ŲChemAxon
Rotatable Bond Count50ChemAxon
Refractivity264.16 m³·mol⁻¹ChemAxon
Polarizability111.14 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+317.78831661259
DarkChem[M-H]-300.06731661259
DeepCCS[M+H]+300.07330932474
DeepCCS[M-H]-297.92530932474
DeepCCS[M-2H]-331.16530932474
DeepCCS[M+Na]+305.81330932474
AllCCS[M+H]+316.832859911
AllCCS[M+H-H2O]+316.932859911
AllCCS[M+NH4]+316.632859911
AllCCS[M+Na]+316.632859911
AllCCS[M-H]-271.332859911
AllCCS[M+Na-2H]-278.432859911
AllCCS[M+HCOO]-286.332859911

Predicted Retention Times

Underivatized

Chromatographic MethodRetention TimeReference
Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. 4.67 minutes32390414
Predicted by Siyang on May 30, 202261.6759 minutes33406817
Predicted by Siyang using ReTip algorithm on June 8, 20220.72 minutes32390414
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid7797.9 seconds40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid1532.3 seconds40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid627.2 seconds40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid810.3 seconds40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid1626.3 seconds40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid2952.9 seconds40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid2032.8 seconds40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)161.9 seconds40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid5969.9 seconds40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid1721.6 seconds40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid4830.3 seconds40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid2210.1 seconds40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid1202.8 seconds40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate1164.5 seconds40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA1469.8 seconds40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water12.6 seconds40023050

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Glycerol 1,3-di-(9Z,12Z-octadecadienoate) 2-hexadecanoateCCCCCCCCCCCCCCCC(=O)OC(COC(=O)CCCCCCC\C=C\C\C=C\CCCCC)COC(=O)CCCCCCC\C=C\C\C=C\CCCCC5933.9Standard polar33892256
Glycerol 1,3-di-(9Z,12Z-octadecadienoate) 2-hexadecanoateCCCCCCCCCCCCCCCC(=O)OC(COC(=O)CCCCCCC\C=C\C\C=C\CCCCC)COC(=O)CCCCCCC\C=C\C\C=C\CCCCC5890.6Standard non polar33892256
Glycerol 1,3-di-(9Z,12Z-octadecadienoate) 2-hexadecanoateCCCCCCCCCCCCCCCC(=O)OC(COC(=O)CCCCCCC\C=C\C\C=C\CCCCC)COC(=O)CCCCCCC\C=C\C\C=C\CCCCC5917.2Semi standard non polar33892256
Spectra

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glycerol 1,3-di-(9Z,12Z-octadecadienoate) 2-hexadecanoate 10V, Positive-QTOFsplash10-00di-0000000090-6208a1c55097185c43bc2017-10-04Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glycerol 1,3-di-(9Z,12Z-octadecadienoate) 2-hexadecanoate 20V, Positive-QTOFsplash10-00di-0000000090-6208a1c55097185c43bc2017-10-04Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glycerol 1,3-di-(9Z,12Z-octadecadienoate) 2-hexadecanoate 40V, Positive-QTOFsplash10-056t-0000090030-d466754a843bc8ea040c2017-10-04Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glycerol 1,3-di-(9Z,12Z-octadecadienoate) 2-hexadecanoate 10V, Positive-QTOFsplash10-03di-0000000090-59539dfb428f41ddecf82021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glycerol 1,3-di-(9Z,12Z-octadecadienoate) 2-hexadecanoate 20V, Positive-QTOFsplash10-03di-0000000090-59539dfb428f41ddecf82021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glycerol 1,3-di-(9Z,12Z-octadecadienoate) 2-hexadecanoate 40V, Positive-QTOFsplash10-03ei-0090040040-0873ab973c67001a1d7c2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glycerol 1,3-di-(9Z,12Z-octadecadienoate) 2-hexadecanoate 10V, Positive-QTOFsplash10-0a6r-3141040690-fdc9b5037a7bc88e175d2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glycerol 1,3-di-(9Z,12Z-octadecadienoate) 2-hexadecanoate 20V, Positive-QTOFsplash10-059i-3391020420-110ff3a246007f81a6152021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glycerol 1,3-di-(9Z,12Z-octadecadienoate) 2-hexadecanoate 40V, Positive-QTOFsplash10-01xx-2983030210-f0778469b56ca33a88cd2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glycerol 1,3-di-(9Z,12Z-octadecadienoate) 2-hexadecanoate 10V, Positive-QTOFsplash10-004i-0000000090-336a6e861e77b5821f302021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glycerol 1,3-di-(9Z,12Z-octadecadienoate) 2-hexadecanoate 20V, Positive-QTOFsplash10-004i-0000000090-336a6e861e77b5821f302021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glycerol 1,3-di-(9Z,12Z-octadecadienoate) 2-hexadecanoate 40V, Positive-QTOFsplash10-004i-0000000090-336a6e861e77b5821f302021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glycerol 1,3-di-(9Z,12Z-octadecadienoate) 2-hexadecanoate 10V, Negative-QTOFsplash10-0udi-0052072090-e943a4980496af2229af2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glycerol 1,3-di-(9Z,12Z-octadecadienoate) 2-hexadecanoate 20V, Negative-QTOFsplash10-0pb9-0094051020-390942172386ccdb50bc2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glycerol 1,3-di-(9Z,12Z-octadecadienoate) 2-hexadecanoate 40V, Negative-QTOFsplash10-056r-1095011000-6784fcb643321037e0ac2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glycerol 1,3-di-(9Z,12Z-octadecadienoate) 2-hexadecanoate 10V, Positive-QTOFsplash10-00di-0000000090-41f870198c6bd847264f2021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glycerol 1,3-di-(9Z,12Z-octadecadienoate) 2-hexadecanoate 20V, Positive-QTOFsplash10-00di-0000000090-41f870198c6bd847264f2021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glycerol 1,3-di-(9Z,12Z-octadecadienoate) 2-hexadecanoate 40V, Positive-QTOFsplash10-056t-0010090030-64bcc15b4144f2bc20842021-09-25Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB003127
KNApSAcK IDNot Available
Chemspider ID30776885
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound15607289
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. Ghosh S, Strum JC, Bell RM: Lipid biochemistry: functions of glycerolipids and sphingolipids in cellular signaling. FASEB J. 1997 Jan;11(1):45-50. [PubMed:9034165 ]
  6. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  7. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.
  8. Linda T. Welson (2006). Triglycerides and Cholesterol Research. Nova Science Publishers Inc..