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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:51:57 UTC
Update Date2022-03-07 02:53:28 UTC
HMDB IDHMDB0032809
Secondary Accession Numbers
  • HMDB32809
Metabolite Identification
Common Name4-Hydroxyphenylacetonitrile triacetylrhamnoside
Description4-Hydroxyphenylacetonitrile triacetylrhamnoside belongs to the class of organic compounds known as phenolic glycosides. These are organic compounds containing a phenolic structure attached to a glycosyl moiety. Some examples of phenolic structures include lignans, and flavonoids. Among the sugar units found in natural glycosides are D-glucose, L-Fructose, and L rhamnose. Based on a literature review very few articles have been published on 4-Hydroxyphenylacetonitrile triacetylrhamnoside.
Structure
Data?1564696625
Synonyms
ValueSource
4-(2',3',4'-Tri-O-acetyl-alpha-L-rhamnopyranosyloxy)-phenylacetonitrileHMDB
4-(2’,3’,4’-tri-O-acetyl-α-L-rhamnopyranosyloxy)-phenylacetonitrileHMDB
4-[(2',3',4'-Tri-O-acetyl-alpha-L-rhamnosyloxy)benzyl]nitrileHMDB
4-[(2,3,4-Tri-O-acetyl-6-deoxy-alpha-L-mannopyranosyl)oxy]benzonitrileHMDB
4-[(2,3,4-Tri-O-acetyl-6-deoxy-α-L-mannopyranosyl)oxy]benzonitrileHMDB
4-[(2’,3’,4’-tri-O-acetyl-α-L-rhamnosyloxy)benzyl]nitrileHMDB
4-Hydroxyphenylacetonitrile triacetylrhamnosideHMDB
Chemical FormulaC20H23NO8
Average Molecular Weight405.403
Monoisotopic Molecular Weight405.142366705
IUPAC Name(2S,3S,4R,5R,6S)-4,5-bis(acetyloxy)-6-[4-(cyanomethyl)phenoxy]-2-methyloxan-3-yl acetate
Traditional Name(2S,3S,4R,5R,6S)-4,5-bis(acetyloxy)-6-[4-(cyanomethyl)phenoxy]-2-methyloxan-3-yl acetate
CAS Registry Number172163-93-8
SMILES
C[C@@H]1O[C@@H](OC2=CC=C(CC#N)C=C2)[C@H](OC(C)=O)[C@H](OC(C)=O)[C@H]1OC(C)=O
InChI Identifier
InChI=1S/C20H23NO8/c1-11-17(26-12(2)22)18(27-13(3)23)19(28-14(4)24)20(25-11)29-16-7-5-15(6-8-16)9-10-21/h5-8,11,17-20H,9H2,1-4H3/t11-,17-,18+,19+,20-/m0/s1
InChI KeyCRZLVGUYFBECND-FXCHBBSNSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as phenolic glycosides. These are organic compounds containing a phenolic structure attached to a glycosyl moiety. Some examples of phenolic structures include lignans, and flavonoids. Among the sugar units found in natural glycosides are D-glucose, L-Fructose, and L rhamnose.
KingdomOrganic compounds
Super ClassOrganic oxygen compounds
ClassOrganooxygen compounds
Sub ClassCarbohydrates and carbohydrate conjugates
Direct ParentPhenolic glycosides
Alternative Parents
Substituents
  • Phenolic glycoside
  • Hexose monosaccharide
  • O-glycosyl compound
  • Benzyl-cyanide
  • Tricarboxylic acid or derivatives
  • Phenoxy compound
  • Phenol ether
  • Monocyclic benzene moiety
  • Monosaccharide
  • Benzenoid
  • Oxane
  • Carboxylic acid ester
  • Acetal
  • Carboxylic acid derivative
  • Oxacycle
  • Carbonitrile
  • Nitrile
  • Organoheterocyclic compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organic nitrogen compound
  • Organopnictogen compound
  • Carbonyl group
  • Organonitrogen compound
  • Aromatic heteromonocyclic compound
Molecular FrameworkAromatic heteromonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effect
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point103 °CNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.077 g/LALOGPS
logP2.54ALOGPS
logP1.47ChemAxon
logS-3.7ALOGPS
pKa (Strongest Acidic)14.18ChemAxon
pKa (Strongest Basic)-4.3ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area121.15 ŲChemAxon
Rotatable Bond Count9ChemAxon
Refractivity96.38 m³·mol⁻¹ChemAxon
Polarizability40.5 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+182.75630932474
DeepCCS[M-H]-180.36130932474
DeepCCS[M-2H]-213.24430932474
DeepCCS[M+Na]+188.66930932474
AllCCS[M+H]+195.332859911
AllCCS[M+H-H2O]+193.032859911
AllCCS[M+NH4]+197.532859911
AllCCS[M+Na]+198.132859911
AllCCS[M-H]-193.832859911
AllCCS[M+Na-2H]-194.332859911
AllCCS[M+HCOO]-195.032859911

Predicted Retention Times

Underivatized

Chromatographic MethodRetention TimeReference
Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. Predicted by Afia on May 17, 2022.6.13 minutes32390414
Predicted by Siyang on May 30, 202214.9471 minutes33406817
Predicted by Siyang using ReTip algorithm on June 8, 20221.07 minutes32390414
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid2340.3 seconds40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid294.9 seconds40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid164.9 seconds40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid178.0 seconds40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid92.0 seconds40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid576.5 seconds40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid573.3 seconds40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)125.2 seconds40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid1274.3 seconds40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid537.0 seconds40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid1841.0 seconds40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid372.7 seconds40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid450.8 seconds40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate316.4 seconds40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA173.6 seconds40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water37.1 seconds40023050

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
4-Hydroxyphenylacetonitrile triacetylrhamnosideC[C@@H]1O[C@@H](OC2=CC=C(CC#N)C=C2)[C@H](OC(C)=O)[C@H](OC(C)=O)[C@H]1OC(C)=O3016.7Standard polar33892256
4-Hydroxyphenylacetonitrile triacetylrhamnosideC[C@@H]1O[C@@H](OC2=CC=C(CC#N)C=C2)[C@H](OC(C)=O)[C@H](OC(C)=O)[C@H]1OC(C)=O2595.7Standard non polar33892256
4-Hydroxyphenylacetonitrile triacetylrhamnosideC[C@@H]1O[C@@H](OC2=CC=C(CC#N)C=C2)[C@H](OC(C)=O)[C@H](OC(C)=O)[C@H]1OC(C)=O2593.3Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 4-Hydroxyphenylacetonitrile triacetylrhamnoside GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 4-Hydroxyphenylacetonitrile triacetylrhamnoside 10V, Positive-QTOFsplash10-03k9-0090000000-bf42534248baccd4aad52021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 4-Hydroxyphenylacetonitrile triacetylrhamnoside 20V, Positive-QTOFsplash10-08fr-0292200000-d74b3c557fdf81ee02542021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 4-Hydroxyphenylacetonitrile triacetylrhamnoside 40V, Positive-QTOFsplash10-08fu-5941000000-05933381c286e6cf28362021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 4-Hydroxyphenylacetonitrile triacetylrhamnoside 10V, Negative-QTOFsplash10-0udi-0405900000-468f3f667b55dda1482c2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 4-Hydroxyphenylacetonitrile triacetylrhamnoside 20V, Negative-QTOFsplash10-0pc0-5729000000-bbeb3f8fecd598e923e92021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 4-Hydroxyphenylacetonitrile triacetylrhamnoside 40V, Negative-QTOFsplash10-0zgl-5902000000-b46a991f8a6e2a65d0622021-09-22Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB010783
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound101919835
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .