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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 20:53:26 UTC
Update Date2022-03-07 02:54:40 UTC
HMDB IDHMDB0035866
Secondary Accession Numbers
  • HMDB35866
Metabolite Identification
Common NameMelledonal C
DescriptionMelledonal C belongs to the class of organic compounds known as melleolides and analogues. Melleolides and analogues are compounds with a structure characterized by the presence of a 2-hydroxy-4-methoxy-6-methylbenzoic acid derivative linked to a 3,6,6,7b-tetramethyl-cyclobuta[e]indene moiety. Based on a literature review a small amount of articles have been published on Melledonal C.
Structure
Data?1563862784
Synonyms
ValueSource
3-Formyl-2a,4a,7-trihydroxy-6,6,7b-trimethyl-1H,2H,2ah,4ah,5H,6H,7H,7ah,7BH-cyclobuta[e]inden-2-yl 3-chloro-6-hydroxy-4-methoxy-2-methylbenzoic acidHMDB
Chemical FormulaC24H29ClO8
Average Molecular Weight480.935
Monoisotopic Molecular Weight480.155095611
IUPAC Name3-formyl-2a,4a,7-trihydroxy-6,6,7b-trimethyl-1H,2H,2aH,4aH,5H,6H,7H,7aH,7bH-cyclobuta[e]inden-2-yl 3-chloro-6-hydroxy-4-methoxy-2-methylbenzoate
Traditional Name3-formyl-2a,4a,7-trihydroxy-6,6,7b-trimethyl-1H,2H,5H,7H,7aH-cyclobuta[e]inden-2-yl 3-chloro-6-hydroxy-4-methoxy-2-methylbenzoate
CAS Registry Number117458-35-2
SMILES
COC1=C(Cl)C(C)=C(C(=O)OC2CC3(C)C4C(O)C(C)(C)CC4(O)C=C(C=O)C23O)C(O)=C1
InChI Identifier
InChI=1S/C24H29ClO8/c1-11-16(13(27)6-14(32-5)17(11)25)20(29)33-15-8-22(4)18-19(28)21(2,3)10-23(18,30)7-12(9-26)24(15,22)31/h6-7,9,15,18-19,27-28,30-31H,8,10H2,1-5H3
InChI KeyRCBZBPPFXBBNCD-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as melleolides and analogues. Melleolides and analogues are compounds with a structure characterized by the presence of a 2-hydroxy-4-methoxy-6-methylbenzoic acid derivative linked to a 3,6,6,7b-tetramethyl-cyclobuta[e]indene moiety.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassSesquiterpenoids
Direct ParentMelleolides and analogues
Alternative Parents
Substituents
  • Melleolide-skeleton
  • P-methoxybenzoic acid or derivatives
  • O-hydroxybenzoic acid ester
  • Salicylic acid or derivatives
  • Benzoate ester
  • 3-halobenzoic acid or derivatives
  • Methoxyphenol
  • Halobenzoic acid or derivatives
  • Benzoic acid or derivatives
  • Benzoyl
  • Methoxybenzene
  • M-cresol
  • Anisole
  • 4-chlorophenol
  • 4-halophenol
  • Phenoxy compound
  • Phenol ether
  • Chlorobenzene
  • Halobenzene
  • 1-hydroxy-2-unsubstituted benzenoid
  • Alkyl aryl ether
  • Toluene
  • Phenol
  • Benzenoid
  • Aryl chloride
  • Monocyclic benzene moiety
  • Aryl halide
  • Vinylogous acid
  • Tertiary alcohol
  • Cyclic alcohol
  • Carboxylic acid ester
  • Cyclobutanol
  • Secondary alcohol
  • Polyol
  • Monocarboxylic acid or derivatives
  • Carboxylic acid derivative
  • Ether
  • Organohalogen compound
  • Organochloride
  • Organooxygen compound
  • Alcohol
  • Hydrocarbon derivative
  • Aldehyde
  • Carbonyl group
  • Organic oxygen compound
  • Organic oxide
  • Aromatic homopolycyclic compound
Molecular FrameworkAromatic homopolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Process
Role
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point200 - 205 °CNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.1 g/LALOGPS
logP2.22ALOGPS
logP2.59ChemAxon
logS-3.7ALOGPS
pKa (Strongest Acidic)9.33ChemAxon
pKa (Strongest Basic)-3.1ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count7ChemAxon
Hydrogen Donor Count4ChemAxon
Polar Surface Area133.52 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity120.2 m³·mol⁻¹ChemAxon
Polarizability48.65 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M-2H]-243.21830932474
DeepCCS[M+Na]+218.64230932474
AllCCS[M+H]+207.532859911
AllCCS[M+H-H2O]+205.832859911
AllCCS[M+NH4]+209.132859911
AllCCS[M+Na]+209.632859911
AllCCS[M-H]-209.932859911
AllCCS[M+Na-2H]-210.932859911
AllCCS[M+HCOO]-212.232859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Melledonal CCOC1=C(Cl)C(C)=C(C(=O)OC2CC3(C)C4C(O)C(C)(C)CC4(O)C=C(C=O)C23O)C(O)=C14946.1Standard polar33892256
Melledonal CCOC1=C(Cl)C(C)=C(C(=O)OC2CC3(C)C4C(O)C(C)(C)CC4(O)C=C(C=O)C23O)C(O)=C13227.0Standard non polar33892256
Melledonal CCOC1=C(Cl)C(C)=C(C(=O)OC2CC3(C)C4C(O)C(C)(C)CC4(O)C=C(C=O)C23O)C(O)=C13514.5Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Melledonal C,1TMS,isomer #1COC1=CC(O)=C(C(=O)OC2CC3(C)C4C(O[Si](C)(C)C)C(C)(C)CC4(O)C=C(C=O)C23O)C(C)=C1Cl3654.4Semi standard non polar33892256
Melledonal C,1TMS,isomer #2COC1=CC(O)=C(C(=O)OC2CC3(C)C4C(O)C(C)(C)CC4(O[Si](C)(C)C)C=C(C=O)C23O)C(C)=C1Cl3651.8Semi standard non polar33892256
Melledonal C,1TMS,isomer #3COC1=CC(O)=C(C(=O)OC2CC3(C)C4C(O)C(C)(C)CC4(O)C=C(C=O)C23O[Si](C)(C)C)C(C)=C1Cl3724.9Semi standard non polar33892256
Melledonal C,1TMS,isomer #4COC1=CC(O[Si](C)(C)C)=C(C(=O)OC2CC3(C)C4C(O)C(C)(C)CC4(O)C=C(C=O)C23O)C(C)=C1Cl3745.1Semi standard non polar33892256
Melledonal C,2TMS,isomer #1COC1=CC(O[Si](C)(C)C)=C(C(=O)OC2CC3(C)C4C(O[Si](C)(C)C)C(C)(C)CC4(O)C=C(C=O)C23O)C(C)=C1Cl3556.5Semi standard non polar33892256
Melledonal C,2TMS,isomer #2COC1=CC(O)=C(C(=O)OC2CC3(C)C4C(O[Si](C)(C)C)C(C)(C)CC4(O[Si](C)(C)C)C=C(C=O)C23O)C(C)=C1Cl3508.5Semi standard non polar33892256
Melledonal C,2TMS,isomer #3COC1=CC(O)=C(C(=O)OC2CC3(C)C4C(O[Si](C)(C)C)C(C)(C)CC4(O)C=C(C=O)C23O[Si](C)(C)C)C(C)=C1Cl3553.9Semi standard non polar33892256
Melledonal C,2TMS,isomer #4COC1=CC(O[Si](C)(C)C)=C(C(=O)OC2CC3(C)C4C(O)C(C)(C)CC4(O[Si](C)(C)C)C=C(C=O)C23O)C(C)=C1Cl3546.3Semi standard non polar33892256
Melledonal C,2TMS,isomer #5COC1=CC(O)=C(C(=O)OC2CC3(C)C4C(O)C(C)(C)CC4(O[Si](C)(C)C)C=C(C=O)C23O[Si](C)(C)C)C(C)=C1Cl3562.0Semi standard non polar33892256
Melledonal C,2TMS,isomer #6COC1=CC(O[Si](C)(C)C)=C(C(=O)OC2CC3(C)C4C(O)C(C)(C)CC4(O)C=C(C=O)C23O[Si](C)(C)C)C(C)=C1Cl3644.7Semi standard non polar33892256
Melledonal C,3TMS,isomer #1COC1=CC(O[Si](C)(C)C)=C(C(=O)OC2CC3(C)C4C(O[Si](C)(C)C)C(C)(C)CC4(O[Si](C)(C)C)C=C(C=O)C23O)C(C)=C1Cl3457.8Semi standard non polar33892256
Melledonal C,3TMS,isomer #2COC1=CC(O[Si](C)(C)C)=C(C(=O)OC2CC3(C)C4C(O[Si](C)(C)C)C(C)(C)CC4(O)C=C(C=O)C23O[Si](C)(C)C)C(C)=C1Cl3486.7Semi standard non polar33892256
Melledonal C,3TMS,isomer #3COC1=CC(O)=C(C(=O)OC2CC3(C)C4C(O[Si](C)(C)C)C(C)(C)CC4(O[Si](C)(C)C)C=C(C=O)C23O[Si](C)(C)C)C(C)=C1Cl3445.4Semi standard non polar33892256
Melledonal C,3TMS,isomer #4COC1=CC(O[Si](C)(C)C)=C(C(=O)OC2CC3(C)C4C(O)C(C)(C)CC4(O[Si](C)(C)C)C=C(C=O)C23O[Si](C)(C)C)C(C)=C1Cl3498.8Semi standard non polar33892256
Melledonal C,4TMS,isomer #1COC1=CC(O[Si](C)(C)C)=C(C(=O)OC2CC3(C)C4C(O[Si](C)(C)C)C(C)(C)CC4(O[Si](C)(C)C)C=C(C=O)C23O[Si](C)(C)C)C(C)=C1Cl3432.0Semi standard non polar33892256
Melledonal C,1TBDMS,isomer #1COC1=CC(O)=C(C(=O)OC2CC3(C)C4C(O[Si](C)(C)C(C)(C)C)C(C)(C)CC4(O)C=C(C=O)C23O)C(C)=C1Cl3900.5Semi standard non polar33892256
Melledonal C,1TBDMS,isomer #2COC1=CC(O)=C(C(=O)OC2CC3(C)C4C(O)C(C)(C)CC4(O[Si](C)(C)C(C)(C)C)C=C(C=O)C23O)C(C)=C1Cl3886.3Semi standard non polar33892256
Melledonal C,1TBDMS,isomer #3COC1=CC(O)=C(C(=O)OC2CC3(C)C4C(O)C(C)(C)CC4(O)C=C(C=O)C23O[Si](C)(C)C(C)(C)C)C(C)=C1Cl3969.1Semi standard non polar33892256
Melledonal C,1TBDMS,isomer #4COC1=CC(O[Si](C)(C)C(C)(C)C)=C(C(=O)OC2CC3(C)C4C(O)C(C)(C)CC4(O)C=C(C=O)C23O)C(C)=C1Cl3968.3Semi standard non polar33892256
Melledonal C,2TBDMS,isomer #1COC1=CC(O[Si](C)(C)C(C)(C)C)=C(C(=O)OC2CC3(C)C4C(O[Si](C)(C)C(C)(C)C)C(C)(C)CC4(O)C=C(C=O)C23O)C(C)=C1Cl4026.4Semi standard non polar33892256
Melledonal C,2TBDMS,isomer #2COC1=CC(O)=C(C(=O)OC2CC3(C)C4C(O[Si](C)(C)C(C)(C)C)C(C)(C)CC4(O[Si](C)(C)C(C)(C)C)C=C(C=O)C23O)C(C)=C1Cl3987.9Semi standard non polar33892256
Melledonal C,2TBDMS,isomer #3COC1=CC(O)=C(C(=O)OC2CC3(C)C4C(O[Si](C)(C)C(C)(C)C)C(C)(C)CC4(O)C=C(C=O)C23O[Si](C)(C)C(C)(C)C)C(C)=C1Cl4044.7Semi standard non polar33892256
Melledonal C,2TBDMS,isomer #4COC1=CC(O[Si](C)(C)C(C)(C)C)=C(C(=O)OC2CC3(C)C4C(O)C(C)(C)CC4(O[Si](C)(C)C(C)(C)C)C=C(C=O)C23O)C(C)=C1Cl4012.3Semi standard non polar33892256
Melledonal C,2TBDMS,isomer #5COC1=CC(O)=C(C(=O)OC2CC3(C)C4C(O)C(C)(C)CC4(O[Si](C)(C)C(C)(C)C)C=C(C=O)C23O[Si](C)(C)C(C)(C)C)C(C)=C1Cl4031.0Semi standard non polar33892256
Melledonal C,2TBDMS,isomer #6COC1=CC(O[Si](C)(C)C(C)(C)C)=C(C(=O)OC2CC3(C)C4C(O)C(C)(C)CC4(O)C=C(C=O)C23O[Si](C)(C)C(C)(C)C)C(C)=C1Cl4108.2Semi standard non polar33892256
Melledonal C,3TBDMS,isomer #1COC1=CC(O[Si](C)(C)C(C)(C)C)=C(C(=O)OC2CC3(C)C4C(O[Si](C)(C)C(C)(C)C)C(C)(C)CC4(O[Si](C)(C)C(C)(C)C)C=C(C=O)C23O)C(C)=C1Cl4115.1Semi standard non polar33892256
Melledonal C,3TBDMS,isomer #2COC1=CC(O[Si](C)(C)C(C)(C)C)=C(C(=O)OC2CC3(C)C4C(O[Si](C)(C)C(C)(C)C)C(C)(C)CC4(O)C=C(C=O)C23O[Si](C)(C)C(C)(C)C)C(C)=C1Cl4154.9Semi standard non polar33892256
Melledonal C,3TBDMS,isomer #3COC1=CC(O)=C(C(=O)OC2CC3(C)C4C(O[Si](C)(C)C(C)(C)C)C(C)(C)CC4(O[Si](C)(C)C(C)(C)C)C=C(C=O)C23O[Si](C)(C)C(C)(C)C)C(C)=C1Cl4127.8Semi standard non polar33892256
Melledonal C,3TBDMS,isomer #4COC1=CC(O[Si](C)(C)C(C)(C)C)=C(C(=O)OC2CC3(C)C4C(O)C(C)(C)CC4(O[Si](C)(C)C(C)(C)C)C=C(C=O)C23O[Si](C)(C)C(C)(C)C)C(C)=C1Cl4154.0Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Melledonal C GC-MS (Non-derivatized) - 70eV, Positivesplash10-0zi9-9870200000-37509e74f42ba6d361aa2017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Melledonal C GC-MS (3 TMS) - 70eV, Positivesplash10-001i-0019003000-0136db6a0542b42dd6202017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Melledonal C GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Melledonal C 10V, Positive-QTOFsplash10-01ot-0120900000-295df9ac3a31e926d4b02016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Melledonal C 20V, Positive-QTOFsplash10-0002-0661900000-b8eff76d9a2cf4280eb32016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Melledonal C 40V, Positive-QTOFsplash10-00kb-1940100000-7b2859de7c97687a4d592016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Melledonal C 10V, Negative-QTOFsplash10-01t9-0120900000-f03b172bb9fcc44cf5e92016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Melledonal C 20V, Negative-QTOFsplash10-03k9-0660900000-eea9210f36ff0efddedd2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Melledonal C 40V, Negative-QTOFsplash10-00di-1930000000-78d3ce3189a63d7fcc942016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Melledonal C 10V, Positive-QTOFsplash10-01ot-0150900000-5430693bd514094220b82021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Melledonal C 20V, Positive-QTOFsplash10-0002-0951600000-97d9fe0087de5bdb4f3f2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Melledonal C 40V, Positive-QTOFsplash10-004j-1950200000-ba6860ad0ab45d201a0c2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Melledonal C 10V, Negative-QTOFsplash10-004i-0000900000-64e423a0b7e1600047bf2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Melledonal C 20V, Negative-QTOFsplash10-00c0-0650900000-e5575bd3e9669abf7d5b2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Melledonal C 40V, Negative-QTOFsplash10-0561-9710200000-0541638817d3d8c6c7c22021-09-22Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB014646
KNApSAcK IDC00021465
Chemspider ID28570342
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound14166106
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.