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Record Information

Version

5.0

Status

Expected but not Quantified

Creation Date

2012-09-11 21:49:07 UTC

Update Date

2022-03-07 02:55:00 UTC

HMDB ID

HMDB0036655

Secondary Accession Numbers

HMDB36655

Metabolite Identification

Common Name

Rubinic acid

Description

Rubinic acid, also known as rubinate, belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units. Based on a literature review a small amount of articles have been published on Rubinic acid.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI


  Mrv0541 01101308402D          

 35 39  0  0  0  0            999 V2000
   -3.1616    0.7523    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8761    0.3398    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8761   -0.4852    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1616   -0.8977    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4471   -0.4852    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4471    0.3398    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.7327    0.7523    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7327   -0.8977    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0182   -0.4852    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.0182    0.3398    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.0182    1.9899    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7327    1.5774    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3037    0.7523    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.3037    1.5774    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4107    1.9899    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.4107    0.3398    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1252    0.7523    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1252    1.5774    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.1252    3.2274    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.4107    2.8149    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.8397    1.9899    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8397    2.8149    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5905   -0.8977    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1616   -1.7227    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8761   -1.3102    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4471    1.1648    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0182    1.1648    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3037   -0.0727    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8397    1.1649    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5541    1.5774    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8397    0.3399    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1252    4.0524    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3038    3.2274    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3037   -0.8977    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4107    1.1649    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  1  6  1  0  0  0  0
  7  6  1  0  0  0  0
  6  5  1  0  0  0  0
  5  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 12  7  1  0  0  0  0
  7 10  1  0  0  0  0
 10 13  1  0  0  0  0
 11 12  1  0  0  0  0
 11 14  2  0  0  0  0
 13 16  1  0  0  0  0
 14 13  1  0  0  0  0
 15 14  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 21  1  0  0  0  0
 15 18  1  0  0  0  0
 20 15  1  0  0  0  0
 19 20  1  0  0  0  0
 21 22  1  0  0  0  0
 19 22  1  0  0  0  0
  3 23  2  0  0  0  0
  4 24  1  0  0  0  0
  4 25  1  0  0  0  0
  6 26  1  1  0  0  0
 10 27  1  1  0  0  0
 13 28  1  6  0  0  0
 18 29  1  1  0  0  0
 29 30  1  0  0  0  0
 29 31  2  0  0  0  0
 19 32  1  6  0  0  0
 20 33  1  1  0  0  0
  9 34  1  6  0  0  0
 15 35  1  1  0  0  0
M  END

HMDB0036655
     RDKit          3D
Rubinic acid
 80 84  0  0  0  0  0  0  0  0999 V2000
    3.0078    0.6048   -2.3924 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5929   -0.1405   -1.1828 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.9440    0.3482    0.0884 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.4645    0.3385    0.0522 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8555    1.4606   -0.3082 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6315    1.5810   -0.3799 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3058    0.5901    0.5368 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7747    0.7677    0.4026 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.5034    0.4185    1.6685 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0296    2.2833    0.2331 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5244    2.5695    0.2119 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3230    1.4562   -0.2913 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5438    1.5642   -0.2127 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8245    0.1894   -0.8960 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5912   -0.9137   -0.2834 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2292    0.2800   -2.3803 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3519    0.1536   -0.8518 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7444   -1.1538   -1.2227 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2749   -1.2499   -1.0492 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.5595   -0.6391   -2.0977 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7692   -0.7835    0.3157 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.3644   -1.7733    1.3231 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7005   -0.9013    0.4283 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.1855   -2.1202   -0.3322 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1436   -1.0489    1.8694 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6130   -1.2527    2.0371 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5257   -0.3159    1.3041 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.9340    0.6976    2.3131 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0931    0.7047    2.7611 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0442    1.6603    2.7866 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8138   -1.0039    0.9146 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7316   -0.1144    0.1247 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0515    0.3018   -1.1338 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.8022   -0.1853   -2.3428 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2967    1.6573   -2.3590 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9433    0.4144   -2.5218 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5216    0.1558   -3.2870 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4930   -1.1892   -1.4107 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3184    1.4245    0.1381 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4184    2.3487   -0.5713 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9100    1.5429   -1.4214 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8556    2.5992    0.0591 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0558    0.9472    1.5843 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7509    0.5515    2.5037 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3021    1.1701    1.9451 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0079   -0.5380    1.6921 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6761    2.6042   -0.7768 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5938    2.8654    1.0510 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7270    3.4468   -0.4761 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8772    2.9705    1.2089 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4349   -1.2342   -0.9675 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1582   -0.5945    0.6439 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0789   -1.8264   -0.0149 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5226    0.9067   -2.9418 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2793    0.5594   -2.4793 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1268   -0.7681   -2.7683 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0145    0.8603   -1.6811 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9167   -1.2771   -2.3396 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2355   -2.0481   -0.8095 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0497   -2.3488   -1.2158 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1828   -0.3820   -2.8301 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7748   -2.7200    1.3568 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3484   -1.3826    2.3586 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3736   -2.1190    1.0151 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1718   -2.4933    0.0131 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2343   -1.9642   -1.4267 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5255   -3.0007   -0.1811 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9093   -0.0569    2.3589 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6280   -1.7988    2.4519 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7618   -1.1849    3.1656 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9579   -2.2902    1.8398 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2259    2.6203    2.4961 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6453   -1.9121    0.3069 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3281   -1.3495    1.8519 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1017    0.7626    0.7078 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.6089   -0.7725   -0.1614 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0053    1.4304   -1.1436 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3429   -1.0973   -2.7865 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7985    0.6300   -3.0963 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8581   -0.4936   -2.0884 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  2  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  1
  8 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  2  0
 12 14  1  0
 14 15  1  0
 14 16  1  0
 14 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 19 21  1  0
 21 22  1  1
 21 23  1  0
 23 24  1  6
 23 25  1  0
 25 26  1  0
 26 27  1  0
 27 28  1  1
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 28 30  1  0
 27 31  1  0
 31 32  1  0
 32 33  1  0
 33 34  1  0
 33  2  1  0
 27  3  1  0
 23  4  1  0
 21  7  1  0
 17  8  1  0
  1 35  1  0
  1 36  1  0
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  2 38  1  6
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  9 44  1  0
  9 45  1  0
  9 46  1  0
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 18 58  1  0
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 24 66  1  0
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 25 68  1  0
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 26 70  1  0
 26 71  1  0
 30 72  1  0
 31 73  1  0
 31 74  1  0
 32 75  1  0
 32 76  1  0
 33 77  1  6
 34 78  1  0
 34 79  1  0
 34 80  1  0
M  END


  Mrv0541 01101308402D          

 35 39  0  0  0  0            999 V2000
   -3.1616    0.7523    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8761    0.3398    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8761   -0.4852    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1616   -0.8977    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4471   -0.4852    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4471    0.3398    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
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   -4.5905   -0.8977    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
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  9 10  1  0  0  0  0
 12  7  1  0  0  0  0
  7 10  1  0  0  0  0
 10 13  1  0  0  0  0
 11 12  1  0  0  0  0
 11 14  2  0  0  0  0
 13 16  1  0  0  0  0
 14 13  1  0  0  0  0
 15 14  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 21  1  0  0  0  0
 15 18  1  0  0  0  0
 20 15  1  0  0  0  0
 19 20  1  0  0  0  0
 21 22  1  0  0  0  0
 19 22  1  0  0  0  0
  3 23  2  0  0  0  0
  4 24  1  0  0  0  0
  4 25  1  0  0  0  0
  6 26  1  1  0  0  0
 10 27  1  1  0  0  0
 13 28  1  6  0  0  0
 18 29  1  1  0  0  0
 29 30  1  0  0  0  0
 29 31  2  0  0  0  0
 19 32  1  6  0  0  0
 20 33  1  1  0  0  0
  9 34  1  6  0  0  0
 15 35  1  1  0  0  0
M  END
> <DATABASE_ID>
HMDB0036655

> <DATABASE_NAME>
hmdb

> <SMILES>
[H][C@@]12[C@@H](C)[C@H](C)CC[C@@]1(CC[C@]1(C)C2=CCC2[C@@]3(C)CCC(=O)C(C)(C)C3C[C@@H](O)[C@@]12C)C(O)=O

> <INCHI_IDENTIFIER>
InChI=1S/C30H46O4/c1-17-10-13-30(25(33)34)15-14-28(6)19(24(30)18(17)2)8-9-20-27(5)12-11-22(31)26(3,4)21(27)16-23(32)29(20,28)7/h8,17-18,20-21,23-24,32H,9-16H2,1-7H3,(H,33,34)/t17-,18+,20?,21?,23-,24+,27-,28-,29+,30+/m1/s1

> <INCHI_KEY>
MFYBXHRQBFYAQZ-MNPGUHGCSA-N

> <FORMULA>
C30H46O4

> <MOLECULAR_WEIGHT>
470.6838

> <EXACT_MASS>
470.33960996

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_AVERAGE_POLARIZABILITY>
54.973509972362535

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(1S,2R,4aS,6aR,6bR,7R,12aR,14bS)-7-hydroxy-1,2,6a,6b,9,9,12a-heptamethyl-10-oxo-1,2,3,4,4a,5,6,6a,6b,7,8,8a,9,10,11,12,12a,12b,13,14b-icosahydropicene-4a-carboxylic acid

> <ALOGPS_LOGP>
5.55

> <JCHEM_LOGP>
5.914522048333334

> <ALOGPS_LOGS>
-5.26

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
19.9547707322909

> <JCHEM_PKA_STRONGEST_ACIDIC>
4.6447516391903205

> <JCHEM_PKA_STRONGEST_BASIC>
-0.11255803858891433

> <JCHEM_POLAR_SURFACE_AREA>
74.6

> <JCHEM_REFRACTIVITY>
134.3912

> <JCHEM_ROTATABLE_BOND_COUNT>
1

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
2.60e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1S,2R,4aS,6aR,6bR,7R,12aR,14bS)-7-hydroxy-1,2,6a,6b,9,9,12a-heptamethyl-10-oxo-1,2,3,4,5,6,7,8,8a,11,12,12b,13,14b-tetradecahydropicene-4a-carboxylic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0036655
     RDKit          3D
Rubinic acid
 80 84  0  0  0  0  0  0  0  0999 V2000
    3.0078    0.6048   -2.3924 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5929   -0.1405   -1.1828 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.9440    0.3482    0.0884 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.4645    0.3385    0.0522 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8555    1.4606   -0.3082 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6315    1.5810   -0.3799 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3058    0.5901    0.5368 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7747    0.7677    0.4026 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.5034    0.4185    1.6685 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0296    2.2833    0.2331 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5244    2.5695    0.2119 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3230    1.4562   -0.2913 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5438    1.5642   -0.2127 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8245    0.1894   -0.8960 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5912   -0.9137   -0.2834 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2292    0.2800   -2.3803 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3519    0.1536   -0.8518 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7444   -1.1538   -1.2227 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2749   -1.2499   -1.0492 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.5595   -0.6391   -2.0977 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7692   -0.7835    0.3157 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.3644   -1.7733    1.3231 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7005   -0.9013    0.4283 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.1855   -2.1202   -0.3322 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1436   -1.0489    1.8694 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6130   -1.2527    2.0371 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5257   -0.3159    1.3041 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.9340    0.6976    2.3131 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0931    0.7047    2.7611 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0442    1.6603    2.7866 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8138   -1.0039    0.9146 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7316   -0.1144    0.1247 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0515    0.3018   -1.1338 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.8022   -0.1853   -2.3428 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2967    1.6573   -2.3590 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9433    0.4144   -2.5218 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5216    0.1558   -3.2870 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4930   -1.1892   -1.4107 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3184    1.4245    0.1381 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4184    2.3487   -0.5713 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9100    1.5429   -1.4214 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8556    2.5992    0.0591 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0558    0.9472    1.5843 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7509    0.5515    2.5037 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3021    1.1701    1.9451 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0079   -0.5380    1.6921 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6761    2.6042   -0.7768 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5938    2.8654    1.0510 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7270    3.4468   -0.4761 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8772    2.9705    1.2089 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4349   -1.2342   -0.9675 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1582   -0.5945    0.6439 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0789   -1.8264   -0.0149 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5226    0.9067   -2.9418 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2793    0.5594   -2.4793 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1268   -0.7681   -2.7683 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0145    0.8603   -1.6811 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9167   -1.2771   -2.3396 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2355   -2.0481   -0.8095 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0497   -2.3488   -1.2158 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1828   -0.3820   -2.8301 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7748   -2.7200    1.3568 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3484   -1.3826    2.3586 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3736   -2.1190    1.0151 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1718   -2.4933    0.0131 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2343   -1.9642   -1.4267 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5255   -3.0007   -0.1811 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9093   -0.0569    2.3589 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6280   -1.7988    2.4519 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7618   -1.1849    3.1656 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9579   -2.2902    1.8398 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2259    2.6203    2.4961 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6453   -1.9121    0.3069 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3281   -1.3495    1.8519 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1017    0.7626    0.7078 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.6089   -0.7725   -0.1614 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0053    1.4304   -1.1436 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3429   -1.0973   -2.7865 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7985    0.6300   -3.0963 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8581   -0.4936   -2.0884 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  2  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  1
  8 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  2  0
 12 14  1  0
 14 15  1  0
 14 16  1  0
 14 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 19 21  1  0
 21 22  1  1
 21 23  1  0
 23 24  1  6
 23 25  1  0
 25 26  1  0
 26 27  1  0
 27 28  1  1
 28 29  2  0
 28 30  1  0
 27 31  1  0
 31 32  1  0
 32 33  1  0
 33 34  1  0
 33  2  1  0
 27  3  1  0
 23  4  1  0
 21  7  1  0
 17  8  1  0
  1 35  1  0
  1 36  1  0
  1 37  1  0
  2 38  1  6
  3 39  1  1
  5 40  1  0
  6 41  1  0
  6 42  1  0
  7 43  1  0
  9 44  1  0
  9 45  1  0
  9 46  1  0
 10 47  1  0
 10 48  1  0
 11 49  1  0
 11 50  1  0
 15 51  1  0
 15 52  1  0
 15 53  1  0
 16 54  1  0
 16 55  1  0
 16 56  1  0
 17 57  1  0
 18 58  1  0
 18 59  1  0
 19 60  1  1
 20 61  1  0
 22 62  1  0
 22 63  1  0
 22 64  1  0
 24 65  1  0
 24 66  1  0
 24 67  1  0
 25 68  1  0
 25 69  1  0
 26 70  1  0
 26 71  1  0
 30 72  1  0
 31 73  1  0
 31 74  1  0
 32 75  1  0
 32 76  1  0
 33 77  1  6
 34 78  1  0
 34 79  1  0
 34 80  1  0
M  END

HEADER    PROTEIN                                 10-JAN-13   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   10-JAN-13         0                                  
HETATM    1  C   UNK     0      -5.902   1.404   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -7.235   0.634   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -7.235  -0.906   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -5.902  -1.676   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -4.568  -0.906   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -4.568   0.634   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -3.234   1.404   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -3.234  -1.676   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      -1.901  -0.906   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -1.901   0.634   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      -1.901   3.714   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      -3.234   2.944   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      -0.567   1.404   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      -0.567   2.944   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       0.767   3.714   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       0.767   0.634   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       2.100   1.404   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       2.100   2.944   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       2.100   6.024   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       0.767   5.254   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       3.434   3.714   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       3.434   5.254   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0      -8.569  -1.676   0.000  0.00  0.00           O+0
HETATM   24  C   UNK     0      -5.902  -3.216   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      -7.235  -2.446   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0      -4.568   2.174   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      -1.901   2.174   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      -0.567  -0.136   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       3.434   2.174   0.000  0.00  0.00           C+0
HETATM   30  O   UNK     0       4.768   2.944   0.000  0.00  0.00           O+0
HETATM   31  O   UNK     0       3.434   0.634   0.000  0.00  0.00           O+0
HETATM   32  C   UNK     0       2.100   7.564   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0      -0.567   6.024   0.000  0.00  0.00           C+0
HETATM   34  O   UNK     0      -0.567  -1.676   0.000  0.00  0.00           O+0
HETATM   35  H   UNK     0       0.767   2.174   0.000  0.00  0.00           H+0
CONECT    1    2    6                                                       
CONECT    2    1    3                                                       
CONECT    3    2    4   23                                                  
CONECT    4    3    5   24   25                                             
CONECT    5    4    6    8                                                  
CONECT    6    1    7    5   26                                             
CONECT    7    6   12   10                                                  
CONECT    8    5    9                                                       
CONECT    9    8   10   34                                                  
CONECT   10    9    7   13   27                                             
CONECT   11   12   14                                                       
CONECT   12    7   11                                                       
CONECT   13   10   16   14   28                                             
CONECT   14   11   13   15                                                  
CONECT   15   14   18   20   35                                             
CONECT   16   13   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   21   15   29                                             
CONECT   19   20   22   32                                                  
CONECT   20   15   19   33                                                  
CONECT   21   18   22                                                       
CONECT   22   21   19                                                       
CONECT   23    3                                                            
CONECT   24    4                                                            
CONECT   25    4                                                            
CONECT   26    6                                                            
CONECT   27   10                                                            
CONECT   28   13                                                            
CONECT   29   18   30   31                                                  
CONECT   30   29                                                            
CONECT   31   29                                                            
CONECT   32   19                                                            
CONECT   33   20                                                            
CONECT   34    9                                                            
CONECT   35   15                                                            
MASTER        0    0    0    0    0    0    0    0   35    0   78    0
END

COMPND    HMDB0036655
HETATM    1  C1  UNL     1       3.008   0.605  -2.392  1.00  0.00           C  
HETATM    2  C2  UNL     1       3.593  -0.141  -1.183  1.00  0.00           C  
HETATM    3  C3  UNL     1       2.944   0.348   0.088  1.00  0.00           C  
HETATM    4  C4  UNL     1       1.465   0.338   0.052  1.00  0.00           C  
HETATM    5  C5  UNL     1       0.856   1.461  -0.308  1.00  0.00           C  
HETATM    6  C6  UNL     1      -0.631   1.581  -0.380  1.00  0.00           C  
HETATM    7  C7  UNL     1      -1.306   0.590   0.537  1.00  0.00           C  
HETATM    8  C8  UNL     1      -2.775   0.768   0.403  1.00  0.00           C  
HETATM    9  C9  UNL     1      -3.503   0.418   1.669  1.00  0.00           C  
HETATM   10  C10 UNL     1      -3.030   2.283   0.233  1.00  0.00           C  
HETATM   11  C11 UNL     1      -4.524   2.570   0.212  1.00  0.00           C  
HETATM   12  C12 UNL     1      -5.323   1.456  -0.291  1.00  0.00           C  
HETATM   13  O1  UNL     1      -6.544   1.564  -0.213  1.00  0.00           O  
HETATM   14  C13 UNL     1      -4.824   0.189  -0.896  1.00  0.00           C  
HETATM   15  C14 UNL     1      -5.591  -0.914  -0.283  1.00  0.00           C  
HETATM   16  C15 UNL     1      -5.229   0.280  -2.380  1.00  0.00           C  
HETATM   17  C16 UNL     1      -3.352   0.154  -0.852  1.00  0.00           C  
HETATM   18  C17 UNL     1      -2.744  -1.154  -1.223  1.00  0.00           C  
HETATM   19  C18 UNL     1      -1.275  -1.250  -1.049  1.00  0.00           C  
HETATM   20  O2  UNL     1      -0.559  -0.639  -2.098  1.00  0.00           O  
HETATM   21  C19 UNL     1      -0.769  -0.783   0.316  1.00  0.00           C  
HETATM   22  C20 UNL     1      -1.364  -1.773   1.323  1.00  0.00           C  
HETATM   23  C21 UNL     1       0.701  -0.901   0.428  1.00  0.00           C  
HETATM   24  C22 UNL     1       1.185  -2.120  -0.332  1.00  0.00           C  
HETATM   25  C23 UNL     1       1.144  -1.049   1.869  1.00  0.00           C  
HETATM   26  C24 UNL     1       2.613  -1.253   2.037  1.00  0.00           C  
HETATM   27  C25 UNL     1       3.526  -0.316   1.304  1.00  0.00           C  
HETATM   28  C26 UNL     1       3.934   0.698   2.313  1.00  0.00           C  
HETATM   29  O3  UNL     1       5.093   0.705   2.761  1.00  0.00           O  
HETATM   30  O4  UNL     1       3.044   1.660   2.787  1.00  0.00           O  
HETATM   31  C27 UNL     1       4.814  -1.004   0.915  1.00  0.00           C  
HETATM   32  C28 UNL     1       5.732  -0.114   0.125  1.00  0.00           C  
HETATM   33  C29 UNL     1       5.051   0.302  -1.134  1.00  0.00           C  
HETATM   34  C30 UNL     1       5.802  -0.185  -2.343  1.00  0.00           C  
HETATM   35  H1  UNL     1       3.297   1.657  -2.359  1.00  0.00           H  
HETATM   36  H2  UNL     1       1.943   0.414  -2.522  1.00  0.00           H  
HETATM   37  H3  UNL     1       3.522   0.156  -3.287  1.00  0.00           H  
HETATM   38  H4  UNL     1       3.493  -1.189  -1.411  1.00  0.00           H  
HETATM   39  H5  UNL     1       3.318   1.425   0.138  1.00  0.00           H  
HETATM   40  H6  UNL     1       1.418   2.349  -0.571  1.00  0.00           H  
HETATM   41  H7  UNL     1      -0.910   1.543  -1.421  1.00  0.00           H  
HETATM   42  H8  UNL     1      -0.856   2.599   0.059  1.00  0.00           H  
HETATM   43  H9  UNL     1      -1.056   0.947   1.584  1.00  0.00           H  
HETATM   44  H10 UNL     1      -2.751   0.551   2.504  1.00  0.00           H  
HETATM   45  H11 UNL     1      -4.302   1.170   1.945  1.00  0.00           H  
HETATM   46  H12 UNL     1      -4.008  -0.538   1.692  1.00  0.00           H  
HETATM   47  H13 UNL     1      -2.676   2.604  -0.777  1.00  0.00           H  
HETATM   48  H14 UNL     1      -2.594   2.865   1.051  1.00  0.00           H  
HETATM   49  H15 UNL     1      -4.727   3.447  -0.476  1.00  0.00           H  
HETATM   50  H16 UNL     1      -4.877   2.971   1.209  1.00  0.00           H  
HETATM   51  H17 UNL     1      -6.435  -1.234  -0.968  1.00  0.00           H  
HETATM   52  H18 UNL     1      -6.158  -0.594   0.644  1.00  0.00           H  
HETATM   53  H19 UNL     1      -5.079  -1.826  -0.015  1.00  0.00           H  
HETATM   54  H20 UNL     1      -4.523   0.907  -2.942  1.00  0.00           H  
HETATM   55  H21 UNL     1      -6.279   0.559  -2.479  1.00  0.00           H  
HETATM   56  H22 UNL     1      -5.127  -0.768  -2.768  1.00  0.00           H  
HETATM   57  H23 UNL     1      -3.015   0.860  -1.681  1.00  0.00           H  
HETATM   58  H24 UNL     1      -2.917  -1.277  -2.340  1.00  0.00           H  
HETATM   59  H25 UNL     1      -3.235  -2.048  -0.809  1.00  0.00           H  
HETATM   60  H26 UNL     1      -1.050  -2.349  -1.216  1.00  0.00           H  
HETATM   61  H27 UNL     1      -1.183  -0.382  -2.830  1.00  0.00           H  
HETATM   62  H28 UNL     1      -0.775  -2.720   1.357  1.00  0.00           H  
HETATM   63  H29 UNL     1      -1.348  -1.383   2.359  1.00  0.00           H  
HETATM   64  H30 UNL     1      -2.374  -2.119   1.015  1.00  0.00           H  
HETATM   65  H31 UNL     1       2.172  -2.493   0.013  1.00  0.00           H  
HETATM   66  H32 UNL     1       1.234  -1.964  -1.427  1.00  0.00           H  
HETATM   67  H33 UNL     1       0.525  -3.001  -0.181  1.00  0.00           H  
HETATM   68  H34 UNL     1       0.909  -0.057   2.359  1.00  0.00           H  
HETATM   69  H35 UNL     1       0.628  -1.799   2.452  1.00  0.00           H  
HETATM   70  H36 UNL     1       2.762  -1.185   3.166  1.00  0.00           H  
HETATM   71  H37 UNL     1       2.958  -2.290   1.840  1.00  0.00           H  
HETATM   72  H38 UNL     1       3.226   2.620   2.496  1.00  0.00           H  
HETATM   73  H39 UNL     1       4.645  -1.912   0.307  1.00  0.00           H  
HETATM   74  H40 UNL     1       5.328  -1.349   1.852  1.00  0.00           H  
HETATM   75  H41 UNL     1       6.102   0.763   0.708  1.00  0.00           H  
HETATM   76  H42 UNL     1       6.609  -0.772  -0.161  1.00  0.00           H  
HETATM   77  H43 UNL     1       5.005   1.430  -1.144  1.00  0.00           H  
HETATM   78  H44 UNL     1       5.343  -1.097  -2.786  1.00  0.00           H  
HETATM   79  H45 UNL     1       5.798   0.630  -3.096  1.00  0.00           H  
HETATM   80  H46 UNL     1       6.858  -0.494  -2.088  1.00  0.00           H  
CONECT    1    2   35   36   37
CONECT    2    3   33   38
CONECT    3    4   27   39
CONECT    4    5    5   23
CONECT    5    6   40
CONECT    6    7   41   42
CONECT    7    8   21   43
CONECT    8    9   10   17
CONECT    9   44   45   46
CONECT   10   11   47   48
CONECT   11   12   49   50
CONECT   12   13   13   14
CONECT   14   15   16   17
CONECT   15   51   52   53
CONECT   16   54   55   56
CONECT   17   18   57
CONECT   18   19   58   59
CONECT   19   20   21   60
CONECT   20   61
CONECT   21   22   23
CONECT   22   62   63   64
CONECT   23   24   25
CONECT   24   65   66   67
CONECT   25   26   68   69
CONECT   26   27   70   71
CONECT   27   28   31
CONECT   28   29   29   30
CONECT   30   72
CONECT   31   32   73   74
CONECT   32   33   75   76
CONECT   33   34   77
CONECT   34   78   79   80
END

HMDB0036655
     RDKit          3D
Rubinic acid
 80 84  0  0  0  0  0  0  0  0999 V2000
    3.0078    0.6048   -2.3924 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5929   -0.1405   -1.1828 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.9440    0.3482    0.0884 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.4645    0.3385    0.0522 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8555    1.4606   -0.3082 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6315    1.5810   -0.3799 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3058    0.5901    0.5368 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7747    0.7677    0.4026 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.5034    0.4185    1.6685 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0296    2.2833    0.2331 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5244    2.5695    0.2119 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3230    1.4562   -0.2913 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5438    1.5642   -0.2127 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8245    0.1894   -0.8960 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5912   -0.9137   -0.2834 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2292    0.2800   -2.3803 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3519    0.1536   -0.8518 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7444   -1.1538   -1.2227 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2749   -1.2499   -1.0492 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.5595   -0.6391   -2.0977 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7692   -0.7835    0.3157 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.3644   -1.7733    1.3231 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7005   -0.9013    0.4283 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.1855   -2.1202   -0.3322 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1436   -1.0489    1.8694 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6130   -1.2527    2.0371 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5257   -0.3159    1.3041 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.9340    0.6976    2.3131 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0931    0.7047    2.7611 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0442    1.6603    2.7866 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8138   -1.0039    0.9146 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7316   -0.1144    0.1247 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0515    0.3018   -1.1338 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.8022   -0.1853   -2.3428 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2967    1.6573   -2.3590 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9433    0.4144   -2.5218 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5216    0.1558   -3.2870 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4930   -1.1892   -1.4107 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3184    1.4245    0.1381 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4184    2.3487   -0.5713 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9100    1.5429   -1.4214 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8556    2.5992    0.0591 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0558    0.9472    1.5843 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7509    0.5515    2.5037 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3021    1.1701    1.9451 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0079   -0.5380    1.6921 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6761    2.6042   -0.7768 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5938    2.8654    1.0510 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7270    3.4468   -0.4761 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8772    2.9705    1.2089 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4349   -1.2342   -0.9675 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1582   -0.5945    0.6439 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0789   -1.8264   -0.0149 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5226    0.9067   -2.9418 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2793    0.5594   -2.4793 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1268   -0.7681   -2.7683 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0145    0.8603   -1.6811 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9167   -1.2771   -2.3396 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2355   -2.0481   -0.8095 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0497   -2.3488   -1.2158 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1828   -0.3820   -2.8301 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7748   -2.7200    1.3568 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3484   -1.3826    2.3586 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3736   -2.1190    1.0151 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1718   -2.4933    0.0131 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2343   -1.9642   -1.4267 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5255   -3.0007   -0.1811 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9093   -0.0569    2.3589 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6280   -1.7988    2.4519 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7618   -1.1849    3.1656 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9579   -2.2902    1.8398 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2259    2.6203    2.4961 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6453   -1.9121    0.3069 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3281   -1.3495    1.8519 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1017    0.7626    0.7078 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.6089   -0.7725   -0.1614 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0053    1.4304   -1.1436 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3429   -1.0973   -2.7865 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7985    0.6300   -3.0963 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8581   -0.4936   -2.0884 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  2  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  1
  8 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  2  0
 12 14  1  0
 14 15  1  0
 14 16  1  0
 14 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 19 21  1  0
 21 22  1  1
 21 23  1  0
 23 24  1  6
 23 25  1  0
 25 26  1  0
 26 27  1  0
 27 28  1  1
 28 29  2  0
 28 30  1  0
 27 31  1  0
 31 32  1  0
 32 33  1  0
 33 34  1  0
 33  2  1  0
 27  3  1  0
 23  4  1  0
 21  7  1  0
 17  8  1  0
  1 35  1  0
  1 36  1  0
  1 37  1  0
  2 38  1  6
  3 39  1  1
  5 40  1  0
  6 41  1  0
  6 42  1  0
  7 43  1  0
  9 44  1  0
  9 45  1  0
  9 46  1  0
 10 47  1  0
 10 48  1  0
 11 49  1  0
 11 50  1  0
 15 51  1  0
 15 52  1  0
 15 53  1  0
 16 54  1  0
 16 55  1  0
 16 56  1  0
 17 57  1  0
 18 58  1  0
 18 59  1  0
 19 60  1  1
 20 61  1  0
 22 62  1  0
 22 63  1  0
 22 64  1  0
 24 65  1  0
 24 66  1  0
 24 67  1  0
 25 68  1  0
 25 69  1  0
 26 70  1  0
 26 71  1  0
 30 72  1  0
 31 73  1  0
 31 74  1  0
 32 75  1  0
 32 76  1  0
 33 77  1  6
 34 78  1  0
 34 79  1  0
 34 80  1  0
M  END

View in JSmol View Stereo Labels

Synonyms

Value	Source
Rubinate	Generator
7a-Hydroxy-3-oxo-12-ursen-28-Oic acid	HMDB
(1S,2R,4AS,6ar,6BR,7R,12ar,14BS)-7-hydroxy-1,2,6a,6b,9,9,12a-heptamethyl-10-oxo-1,2,3,4,4a,5,6,6a,6b,7,8,8a,9,10,11,12,12a,12b,13,14b-icosahydropicene-4a-carboxylate	Generator

Chemical Formula

C₃₀H₄₆O₄

Average Molecular Weight

470.6838

Monoisotopic Molecular Weight

470.33960996

IUPAC Name

(1S,2R,4aS,6aR,6bR,7R,12aR,14bS)-7-hydroxy-1,2,6a,6b,9,9,12a-heptamethyl-10-oxo-1,2,3,4,4a,5,6,6a,6b,7,8,8a,9,10,11,12,12a,12b,13,14b-icosahydropicene-4a-carboxylic acid

Traditional Name

(1S,2R,4aS,6aR,6bR,7R,12aR,14bS)-7-hydroxy-1,2,6a,6b,9,9,12a-heptamethyl-10-oxo-1,2,3,4,5,6,7,8,8a,11,12,12b,13,14b-tetradecahydropicene-4a-carboxylic acid

CAS Registry Number

94662-96-1

SMILES

[H][C@@]12[C@@H](C)[C@H](C)CC[C@@]1(CC[C@]1(C)C2=CCC2[C@@]3(C)CCC(=O)C(C)(C)C3C[C@@H](O)[C@@]12C)C(O)=O

InChI Identifier

InChI=1S/C30H46O4/c1-17-10-13-30(25(33)34)15-14-28(6)19(24(30)18(17)2)8-9-20-27(5)12-11-22(31)26(3,4)21(27)16-23(32)29(20,28)7/h8,17-18,20-21,23-24,32H,9-16H2,1-7H3,(H,33,34)/t17-,18+,20?,21?,23-,24+,27-,28-,29+,30+/m1/s1

InChI Key

MFYBXHRQBFYAQZ-MNPGUHGCSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Triterpenoids

Direct Parent

Triterpenoids

Alternative Parents

Substituents

Triterpenoid
Cyclic alcohol
Cyclic ketone
Secondary alcohol
Ketone
Monocarboxylic acid or derivatives
Carboxylic acid
Carboxylic acid derivative
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Carbonyl group
Alcohol
Aliphatic homopolycyclic compound

Molecular Framework

Aliphatic homopolycyclic compounds

External Descriptors

Not Available

Ontology

Physiological effect

Not Available

Disposition

Biological location

Cellular substructure

Route of exposure

Enteral

Ingestion (HMDB: HMDB0036655)

Source

Endogenous

Endogenous (HMDB: HMDB0036655)

Plant

Plant (HMDB: HMDB0036655)

Animal

Animal (HMDB: HMDB0036655)

Exogenous

Food

Food (HMDB: HMDB0036655)

Fruit

Fruits (FooDB: FOOD00871)

Exogenous (HMDB: HMDB0036655)

Process

Naturally occurring process

Biological process

Chemical reaction

Lipid Peroxidation (HMDB: HMDB0036655)

Biochemical pathway

Metabolic pathway

Fatty Acid Metabolism (HMDB: HMDB0036655)

Lipid metabolism pathway (HMDB: HMDB0036655)

Cellular process

Cell signaling (HMDB: HMDB0036655)

Biochemical process

Lipid transport (HMDB: HMDB0036655)

Role

Biological role

Energy source (HMDB: HMDB0036655)

Industrial application

Manufacturing industry

Material processing agent

Fluid processing agent

Surfactant

Surfactant (HMDB: HMDB0036655)

Physical Properties

State

Solid

Experimental Molecular Properties

Property	Value	Reference
Melting Point	259 - 261 °C	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	0.086 mg/L @ 25 °C (est)	The Good Scents Company Information System
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
Water Solubility	0.0026 g/L	ALOGPS
logP	5.55	ALOGPS
logP	5.91	ChemAxon
logS	-5.3	ALOGPS
pKa (Strongest Acidic)	4.64	ChemAxon
pKa (Strongest Basic)	-0.11	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	74.6 Å²	ChemAxon
Rotatable Bond Count	1	ChemAxon
Refractivity	134.39 m³·mol⁻¹	ChemAxon
Polarizability	54.97 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
DarkChem	[M+H]+	207.416	31661259
DarkChem	[M-H]-	201.839	31661259
DeepCCS	[M-2H]-	248.124	30932474
DeepCCS	[M+Na]+	222.703	30932474
AllCCS	[M+H]+	214.3	32859911
AllCCS	[M+H-H2O]+	212.6	32859911
AllCCS	[M+NH4]+	215.8	32859911
AllCCS	[M+Na]+	216.2	32859911
AllCCS	[M-H]-	213.3	32859911
AllCCS	[M+Na-2H]-	215.3	32859911
AllCCS	[M+HCOO]-	217.7	32859911

Predicted Retention Times

Underivatized

Chromatographic Method	Retention Time	Reference
Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. Predicted by Afia on May 17, 2022.	9.13 minutes	32390414
Predicted by Siyang on May 30, 2022	20.7531 minutes	33406817
Predicted by Siyang using ReTip algorithm on June 8, 2022	1.45 minutes	32390414
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid	3398.8 seconds	40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid	412.4 seconds	40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid	260.5 seconds	40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid	181.1 seconds	40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	551.8 seconds	40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid	884.0 seconds	40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid	973.3 seconds	40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)	92.1 seconds	40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid	1584.7 seconds	40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid	667.7 seconds	40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid	1919.4 seconds	40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	580.3 seconds	40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	559.9 seconds	40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate	197.4 seconds	40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA	450.8 seconds	40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water	8.7 seconds	40023050

Predicted Kovats Retention Indices

Underivatized

Metabolite	SMILES	Kovats RI Value	Column Type	Reference
Rubinic acid	[H][C@@]12[C@@H](C)[C@H](C)CC[C@@]1(CC[C@]1(C)C2=CCC2[C@@]3(C)CCC(=O)C(C)(C)C3C[C@@H](O)[C@@]12C)C(O)=O	3358.5	Standard polar	33892256
Rubinic acid	[H][C@@]12[C@@H](C)[C@H](C)CC[C@@]1(CC[C@]1(C)C2=CCC2[C@@]3(C)CCC(=O)C(C)(C)C3C[C@@H](O)[C@@]12C)C(O)=O	3734.3	Standard non polar	33892256
Rubinic acid	[H][C@@]12[C@@H](C)[C@H](C)CC[C@@]1(CC[C@]1(C)C2=CCC2[C@@]3(C)CCC(=O)C(C)(C)C3C[C@@H](O)[C@@]12C)C(O)=O	3951.5	Semi standard non polar	33892256

Derivatized

Derivative Name / Structure	SMILES	Kovats RI Value	Column Type	Reference
Rubinic acid,1TMS,isomer #1	C[C@@H]1[C@H]2C3=CCC4[C@@]5(C)CCC(=O)C(C)(C)C5C[C@@H](O[Si](C)(C)C)[C@@]4(C)[C@]3(C)CC[C@@]2(C(=O)O)CC[C@H]1C	3825.6	Semi standard non polar	33892256
Rubinic acid,1TMS,isomer #2	C[C@@H]1[C@H]2C3=CCC4[C@@]5(C)CCC(=O)C(C)(C)C5C[C@@H](O)[C@@]4(C)[C@]3(C)CC[C@@]2(C(=O)O[Si](C)(C)C)CC[C@H]1C	3783.8	Semi standard non polar	33892256
Rubinic acid,1TMS,isomer #3	C[C@@H]1[C@H]2C3=CCC4[C@@]5(C)CC=C(O[Si](C)(C)C)C(C)(C)C5C[C@@H](O)[C@@]4(C)[C@]3(C)CC[C@@]2(C(=O)O)CC[C@H]1C	3861.6	Semi standard non polar	33892256
Rubinic acid,2TMS,isomer #1	C[C@@H]1[C@H]2C3=CCC4[C@@]5(C)CCC(=O)C(C)(C)C5C[C@@H](O[Si](C)(C)C)[C@@]4(C)[C@]3(C)CC[C@@]2(C(=O)O[Si](C)(C)C)CC[C@H]1C	3697.4	Semi standard non polar	33892256
Rubinic acid,2TMS,isomer #2	C[C@@H]1[C@H]2C3=CCC4[C@@]5(C)CC=C(O[Si](C)(C)C)C(C)(C)C5C[C@@H](O[Si](C)(C)C)[C@@]4(C)[C@]3(C)CC[C@@]2(C(=O)O)CC[C@H]1C	3711.1	Semi standard non polar	33892256
Rubinic acid,2TMS,isomer #3	C[C@@H]1[C@H]2C3=CCC4[C@@]5(C)CC=C(O[Si](C)(C)C)C(C)(C)C5C[C@@H](O)[C@@]4(C)[C@]3(C)CC[C@@]2(C(=O)O[Si](C)(C)C)CC[C@H]1C	3740.8	Semi standard non polar	33892256
Rubinic acid,3TMS,isomer #1	C[C@@H]1[C@H]2C3=CCC4[C@@]5(C)CC=C(O[Si](C)(C)C)C(C)(C)C5C[C@@H](O[Si](C)(C)C)[C@@]4(C)[C@]3(C)CC[C@@]2(C(=O)O[Si](C)(C)C)CC[C@H]1C	3629.6	Semi standard non polar	33892256
Rubinic acid,3TMS,isomer #1	C[C@@H]1[C@H]2C3=CCC4[C@@]5(C)CC=C(O[Si](C)(C)C)C(C)(C)C5C[C@@H](O[Si](C)(C)C)[C@@]4(C)[C@]3(C)CC[C@@]2(C(=O)O[Si](C)(C)C)CC[C@H]1C	3641.5	Standard non polar	33892256
Rubinic acid,1TBDMS,isomer #1	C[C@@H]1[C@H]2C3=CCC4[C@@]5(C)CCC(=O)C(C)(C)C5C[C@@H](O[Si](C)(C)C(C)(C)C)[C@@]4(C)[C@]3(C)CC[C@@]2(C(=O)O)CC[C@H]1C	4045.2	Semi standard non polar	33892256
Rubinic acid,1TBDMS,isomer #2	C[C@@H]1[C@H]2C3=CCC4[C@@]5(C)CCC(=O)C(C)(C)C5C[C@@H](O)[C@@]4(C)[C@]3(C)CC[C@@]2(C(=O)O[Si](C)(C)C(C)(C)C)CC[C@H]1C	4037.7	Semi standard non polar	33892256
Rubinic acid,1TBDMS,isomer #3	C[C@@H]1[C@H]2C3=CCC4[C@@]5(C)CC=C(O[Si](C)(C)C(C)(C)C)C(C)(C)C5C[C@@H](O)[C@@]4(C)[C@]3(C)CC[C@@]2(C(=O)O)CC[C@H]1C	4093.9	Semi standard non polar	33892256
Rubinic acid,2TBDMS,isomer #1	C[C@@H]1[C@H]2C3=CCC4[C@@]5(C)CCC(=O)C(C)(C)C5C[C@@H](O[Si](C)(C)C(C)(C)C)[C@@]4(C)[C@]3(C)CC[C@@]2(C(=O)O[Si](C)(C)C(C)(C)C)CC[C@H]1C	4141.4	Semi standard non polar	33892256
Rubinic acid,2TBDMS,isomer #2	C[C@@H]1[C@H]2C3=CCC4[C@@]5(C)CC=C(O[Si](C)(C)C(C)(C)C)C(C)(C)C5C[C@@H](O[Si](C)(C)C(C)(C)C)[C@@]4(C)[C@]3(C)CC[C@@]2(C(=O)O)CC[C@H]1C	4136.1	Semi standard non polar	33892256
Rubinic acid,2TBDMS,isomer #3	C[C@@H]1[C@H]2C3=CCC4[C@@]5(C)CC=C(O[Si](C)(C)C(C)(C)C)C(C)(C)C5C[C@@H](O)[C@@]4(C)[C@]3(C)CC[C@@]2(C(=O)O[Si](C)(C)C(C)(C)C)CC[C@H]1C	4205.4	Semi standard non polar	33892256
Rubinic acid,3TBDMS,isomer #1	C[C@@H]1[C@H]2C3=CCC4[C@@]5(C)CC=C(O[Si](C)(C)C(C)(C)C)C(C)(C)C5C[C@@H](O[Si](C)(C)C(C)(C)C)[C@@]4(C)[C@]3(C)CC[C@@]2(C(=O)O[Si](C)(C)C(C)(C)C)CC[C@H]1C	4249.8	Semi standard non polar	33892256
Rubinic acid,3TBDMS,isomer #1	C[C@@H]1[C@H]2C3=CCC4[C@@]5(C)CC=C(O[Si](C)(C)C(C)(C)C)C(C)(C)C5C[C@@H](O[Si](C)(C)C(C)(C)C)[C@@]4(C)[C@]3(C)CC[C@@]2(C(=O)O[Si](C)(C)C(C)(C)C)CC[C@H]1C	4203.9	Standard non polar	33892256

Spectra

GC-MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted GC-MS	Predicted GC-MS Spectrum - Rubinic acid GC-MS (Non-derivatized) - 70eV, Positive	splash10-0a5l-0293800000-6832fd6907db8c884fee	2017-09-01	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - Rubinic acid GC-MS (2 TMS) - 70eV, Positive	splash10-0f6t-1022192000-b952c2c763cd8e05f46a	2017-10-06	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - Rubinic acid GC-MS (Non-derivatized) - 70eV, Positive	Not Available	2021-10-12	Wishart Lab	View Spectrum

MS/MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Rubinic acid 10V, Positive-QTOF	splash10-0uk9-0000900000-a61d83ce39c329b7276f	2016-06-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Rubinic acid 20V, Positive-QTOF	splash10-0pbi-0110900000-5feefdcc676b00b7a9ce	2016-06-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Rubinic acid 40V, Positive-QTOF	splash10-0a6r-5264900000-803bfc6d086d10998bcb	2016-06-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Rubinic acid 10V, Negative-QTOF	splash10-014i-0000900000-cde9e843e174885928d8	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Rubinic acid 20V, Negative-QTOF	splash10-05r0-0000900000-05a07d2d4419b4480621	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Rubinic acid 40V, Negative-QTOF	splash10-0pb9-2000900000-da19bd85b59bbcf26dac	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Rubinic acid 10V, Positive-QTOF	splash10-00di-0000900000-e75dc1fd94a407ce7cce	2021-09-22	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Rubinic acid 20V, Positive-QTOF	splash10-0fe0-1441900000-b26be2eb995b6ec7d15d	2021-09-22	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Rubinic acid 40V, Positive-QTOF	splash10-05g0-2920000000-1a9f83f4651e3bab1cc9	2021-09-22	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Rubinic acid 10V, Negative-QTOF	splash10-014i-0000900000-d60788820b8857f5a5d5	2021-09-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Rubinic acid 20V, Negative-QTOF	splash10-014i-0000900000-af4ea99d509d44286865	2021-09-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Rubinic acid 40V, Negative-QTOF	splash10-066r-0000900000-332e470a4471a21931dc	2021-09-25	Wishart Lab	View Spectrum

Biological Properties

Cellular Locations

Extracellular
Membrane

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Pathways

Not Available

Name	SMPDB/PathBank	KEGG

Normal Concentrations

Not Available

Abnormal Concentrations

Not Available

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

FDB015581

KNApSAcK ID

C00057682

Chemspider ID

35014181

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

131752024

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

rw1856241

References

Synthesis Reference

Not Available

Material Safety Data Sheet (MSDS)

Not Available

General References

Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
(). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.

Showing metabocard for Rubinic acid (HMDB0036655)

MOL for HMDB0036655 (Rubinic acid)

3D MOL for HMDB0036655 (Rubinic acid)

3D SDF for HMDB0036655 (Rubinic acid)

3D-SDF for HMDB0036655 (Rubinic acid)

PDB for HMDB0036655 (Rubinic acid)

3D PDB for HMDB0036655 (Rubinic acid)

SMILES for HMDB0036655 (Rubinic acid)

INCHI for HMDB0036655 (Rubinic acid)

Structure for HMDB0036655 (Rubinic acid)

3D Structure for HMDB0036655 (Rubinic acid)

Predicted Collision Cross Sections

Predicted Retention Times

Underivatized

Predicted Kovats Retention Indices

Underivatized

Derivatized

GC-MS Spectra

MS/MS Spectra