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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 21:51:57 UTC
Update Date2022-03-07 02:55:01 UTC
HMDB IDHMDB0036699
Secondary Accession Numbers
  • HMDB36699
Metabolite Identification
Common NameChlorophenol red
DescriptionChlorophenol red belongs to the class of organic compounds known as benzofuranones. These are organic compounds containing a benzene ring fused to a furanone. Based on a literature review a significant number of articles have been published on Chlorophenol red.
Structure
Data?1563862911
Synonyms
ValueSource
3',3''-Dichlorophenol- sulfonphthaleinHMDB
3',3''-DichlorophenolsulfonphthaleinHMDB
3',3'-DichlorophenolsulfonaphthaleinHMDB
3,3'-DichlorophenolsulfonephthaleinHMDB
3,3-Bis(3-chloro-4-hydroxyphenyl)3H-2,1-benzoxathiole S,S-dioxideHMDB
4,4'-(3H-2,1-Benzoxathiol-3-ylidene)bis[2-chlorophenol], 9ciHMDB
Chlorophenol red indicatorHMDB
Chlorphenol redHMDB
ChlorphenolsulfonphthaleinHMDB
DichlorophenolsulfonephthaleinHMDB
Reduced 2,6-dichlorophenolindophenolHMDB
Chlorophenol redMeSH
Chemical FormulaC19H12Cl2O5S
Average Molecular Weight423.267
Monoisotopic Molecular Weight421.978249598
IUPAC Name3,3-bis(3-chloro-4-hydroxyphenyl)-3H-2,1λ⁶-benzoxathiole-1,1-dione
Traditional Namechlorophenol red
CAS Registry Number4430-20-0
SMILES
OC1=C(Cl)C=C(C=C1)C1(OS(=O)(=O)C2=CC=CC=C12)C1=CC(Cl)=C(O)C=C1
InChI Identifier
InChI=1S/C19H12Cl2O5S/c20-14-9-11(5-7-16(14)22)19(12-6-8-17(23)15(21)10-12)13-3-1-2-4-18(13)27(24,25)26-19/h1-10,22-23H
InChI KeyWWAABJGNHFGXSJ-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as benzofuranones. These are organic compounds containing a benzene ring fused to a furanone.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassBenzofurans
Sub ClassBenzofuranones
Direct ParentBenzofuranones
Alternative Parents
Substituents
  • Benzofuranone
  • Phthalide
  • Benzoxathiole
  • 2-halophenol
  • 2-chlorophenol
  • 1-hydroxy-2-unsubstituted benzenoid
  • Chlorobenzene
  • Halobenzene
  • Phenol
  • Aryl chloride
  • Aryl halide
  • Monocyclic benzene moiety
  • Benzenoid
  • Organosulfonic acid ester
  • Organosulfonic acid or derivatives
  • Organic sulfonic acid or derivatives
  • Oxacycle
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Organohalogen compound
  • Organochloride
  • Organooxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
Role
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point261 - 262 °CNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.002 g/LALOGPS
logP4.05ALOGPS
logP5.32ChemAxon
logS-5.3ALOGPS
pKa (Strongest Acidic)7.6ChemAxon
pKa (Strongest Basic)-6.7ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area83.83 ŲChemAxon
Rotatable Bond Count2ChemAxon
Refractivity103.73 m³·mol⁻¹ChemAxon
Polarizability39.1 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M-2H]-220.99330932474
DeepCCS[M+Na]+196.19530932474
AllCCS[M+H]+189.832859911
AllCCS[M+H-H2O]+187.132859911
AllCCS[M+NH4]+192.332859911
AllCCS[M+Na]+193.132859911
AllCCS[M-H]-175.532859911
AllCCS[M+Na-2H]-174.432859911
AllCCS[M+HCOO]-173.332859911

Predicted Retention Times

Underivatized

Chromatographic MethodRetention TimeReference
Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. Predicted by Afia on May 17, 2022.8.08 minutes32390414
Predicted by Siyang on May 30, 202215.5812 minutes33406817
Predicted by Siyang using ReTip algorithm on June 8, 20221.01 minutes32390414
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid2607.8 seconds40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid429.1 seconds40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid199.1 seconds40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid238.9 seconds40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid430.6 seconds40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid820.9 seconds40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid520.0 seconds40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)79.1 seconds40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid1440.6 seconds40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid593.2 seconds40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid1547.7 seconds40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid454.5 seconds40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid391.5 seconds40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate333.7 seconds40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA175.3 seconds40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water68.4 seconds40023050

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Chlorophenol redOC1=C(Cl)C=C(C=C1)C1(OS(=O)(=O)C2=CC=CC=C12)C1=CC(Cl)=C(O)C=C14882.2Standard polar33892256
Chlorophenol redOC1=C(Cl)C=C(C=C1)C1(OS(=O)(=O)C2=CC=CC=C12)C1=CC(Cl)=C(O)C=C13107.3Standard non polar33892256
Chlorophenol redOC1=C(Cl)C=C(C=C1)C1(OS(=O)(=O)C2=CC=CC=C12)C1=CC(Cl)=C(O)C=C13449.0Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Chlorophenol red,1TMS,isomer #1C[Si](C)(C)OC1=CC=C(C2(C3=CC=C(O)C(Cl)=C3)OS(=O)(=O)C3=CC=CC=C32)C=C1Cl3416.1Semi standard non polar33892256
Chlorophenol red,2TMS,isomer #1C[Si](C)(C)OC1=CC=C(C2(C3=CC=C(O[Si](C)(C)C)C(Cl)=C3)OS(=O)(=O)C3=CC=CC=C32)C=C1Cl3400.0Semi standard non polar33892256
Chlorophenol red,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC1=CC=C(C2(C3=CC=C(O)C(Cl)=C3)OS(=O)(=O)C3=CC=CC=C32)C=C1Cl3684.8Semi standard non polar33892256
Chlorophenol red,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC1=CC=C(C2(C3=CC=C(O[Si](C)(C)C(C)(C)C)C(Cl)=C3)OS(=O)(=O)C3=CC=CC=C32)C=C1Cl3946.5Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Chlorophenol red GC-MS (Non-derivatized) - 70eV, Positivesplash10-0006-1494300000-ebb14e53125f5d2cd4422017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Chlorophenol red GC-MS (2 TMS) - 70eV, Positivesplash10-014i-4009310000-098761853c02178713aa2017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Chlorophenol red GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlorophenol red 10V, Positive-QTOFsplash10-00di-0010900000-651aa37ef605713d22232016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlorophenol red 20V, Positive-QTOFsplash10-00di-0231900000-1a6db8cbf0685e7a217e2016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlorophenol red 40V, Positive-QTOFsplash10-0f6x-3941000000-f59792ab4e01125065452016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlorophenol red 10V, Negative-QTOFsplash10-00di-0002900000-d80d8e61b9c7699a088c2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlorophenol red 20V, Negative-QTOFsplash10-00fr-0413900000-fe687c782d1e635377e82016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlorophenol red 40V, Negative-QTOFsplash10-004l-2933100000-d08a557d24ab7802a80c2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlorophenol red 10V, Positive-QTOFsplash10-00di-0000900000-b05d41c97edf4017e4aa2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlorophenol red 20V, Positive-QTOFsplash10-00di-0012900000-0a65edb4ef991df36de02021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlorophenol red 40V, Positive-QTOFsplash10-001i-0196000000-dc0ddd8ae2cc9a4454472021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlorophenol red 10V, Negative-QTOFsplash10-00di-0000900000-554c75aa4fb3fcdea4cf2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlorophenol red 20V, Negative-QTOFsplash10-00di-0100900000-63a7ae30c2d49dc071aa2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlorophenol red 40V, Negative-QTOFsplash10-03di-1190100000-7d964675c4f9b59003be2021-09-24Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB015635
KNApSAcK IDNot Available
Chemspider ID19293
KEGG Compound IDC05720
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkChlorophenol red
METLIN IDNot Available
PubChem Compound20486
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Download (PDF)
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .