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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 22:01:06 UTC
Update Date2022-03-07 02:55:05 UTC
HMDB IDHMDB0036839
Secondary Accession Numbers
  • HMDB36839
Metabolite Identification
Common Name(ent-15beta)-15-Hydroxy-19-trachylobanoic acid
Description(ent-15beta)-15-Hydroxy-19-trachylobanoic acid belongs to the class of organic compounds known as kaurane diterpenoids. These are diterpene alkaloids with a structure that is based on the kaurane skeleton. Kaurane is a tetracyclic compound that arises by cyclisation of a pimarane precursor followed by rearrangement. It possesses a [3,2,1]-bicyclic ring system with C15-C16 bridge connected to C13, forming the five-membered ring D (ent-15beta)-15-Hydroxy-19-trachylobanoic acid is an extremely weak basic (essentially neutral) compound (based on its pKa).
Structure
Data?1563862935
Synonyms
ValueSource
(ent-15b)-15-Hydroxy-19-trachylobanoateGenerator
(ent-15b)-15-Hydroxy-19-trachylobanoic acidGenerator
(ent-15beta)-15-Hydroxy-19-trachylobanoateGenerator
(ent-15Β)-15-hydroxy-19-trachylobanoateGenerator
(ent-15Β)-15-hydroxy-19-trachylobanoic acidGenerator
16-Hydroxy-5,9,13-trimethylpentacyclo[11.2.1.0¹,¹⁰.0⁴,⁹.0¹²,¹⁴]hexadecane-5-carboxylateGenerator
Chemical FormulaC20H30O3
Average Molecular Weight318.4504
Monoisotopic Molecular Weight318.219494826
IUPAC Name16-hydroxy-5,9,13-trimethylpentacyclo[11.2.1.0¹,¹⁰.0⁴,⁹.0¹²,¹⁴]hexadecane-5-carboxylic acid
Traditional Name16-hydroxy-5,9,13-trimethylpentacyclo[11.2.1.0¹,¹⁰.0⁴,⁹.0¹²,¹⁴]hexadecane-5-carboxylic acid
CAS Registry Number83404-76-6
SMILES
CC12C3CC4(CCC5C(C)(CCCC5(C)C(O)=O)C4CC13)C2O
InChI Identifier
InChI=1S/C20H30O3/c1-17-6-4-7-18(2,16(22)23)13(17)5-8-20-10-12-11(9-14(17)20)19(12,3)15(20)21/h11-15,21H,4-10H2,1-3H3,(H,22,23)
InChI KeyMHVNHDYWKUKRRJ-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as kaurane diterpenoids. These are diterpene alkaloids with a structure that is based on the kaurane skeleton. Kaurane is a tetracyclic compound that arises by cyclisation of a pimarane precursor followed by rearrangement. It possesses a [3,2,1]-bicyclic ring system with C15-C16 bridge connected to C13, forming the five-membered ring D.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassDiterpenoids
Direct ParentKaurane diterpenoids
Alternative Parents
Substituents
  • Atisane diterpenoid
  • Kaurane diterpenoid
  • Villanovane, atisane, trachylobane or helvifulvane diterpenoid
  • Alkaloid or derivatives
  • Cyclic alcohol
  • Secondary alcohol
  • Carboxylic acid derivative
  • Carboxylic acid
  • Monocarboxylic acid or derivatives
  • Organic oxide
  • Alcohol
  • Carbonyl group
  • Organic oxygen compound
  • Organooxygen compound
  • Hydrocarbon derivative
  • Aliphatic homopolycyclic compound
Molecular FrameworkAliphatic homopolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point265 - 267 °CNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.04 g/LALOGPS
logP2.33ALOGPS
logP3.31ChemAxon
logS-3.9ALOGPS
pKa (Strongest Acidic)4.64ChemAxon
pKa (Strongest Basic)-0.4ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area57.53 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity86.97 m³·mol⁻¹ChemAxon
Polarizability36.16 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+173.08731661259
DarkChem[M-H]-166.77931661259
DeepCCS[M-2H]-211.70530932474
DeepCCS[M+Na]+187.26930932474
AllCCS[M+H]+179.032859911
AllCCS[M+H-H2O]+176.232859911
AllCCS[M+NH4]+181.632859911
AllCCS[M+Na]+182.432859911
AllCCS[M-H]-184.932859911
AllCCS[M+Na-2H]-184.932859911
AllCCS[M+HCOO]-185.132859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
(ent-15beta)-15-Hydroxy-19-trachylobanoic acidCC12C3CC4(CCC5C(C)(CCCC5(C)C(O)=O)C4CC13)C2O2952.6Standard polar33892256
(ent-15beta)-15-Hydroxy-19-trachylobanoic acidCC12C3CC4(CCC5C(C)(CCCC5(C)C(O)=O)C4CC13)C2O2441.6Standard non polar33892256
(ent-15beta)-15-Hydroxy-19-trachylobanoic acidCC12C3CC4(CCC5C(C)(CCCC5(C)C(O)=O)C4CC13)C2O2652.9Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
(ent-15beta)-15-Hydroxy-19-trachylobanoic acid,1TMS,isomer #1CC1(C(=O)O[Si](C)(C)C)CCCC2(C)C1CCC13CC4C(CC21)C4(C)C3O2603.1Semi standard non polar33892256
(ent-15beta)-15-Hydroxy-19-trachylobanoic acid,1TMS,isomer #2CC1(C(=O)O)CCCC2(C)C1CCC13CC4C(CC21)C4(C)C3O[Si](C)(C)C2706.4Semi standard non polar33892256
(ent-15beta)-15-Hydroxy-19-trachylobanoic acid,2TMS,isomer #1CC1(C(=O)O[Si](C)(C)C)CCCC2(C)C1CCC13CC4C(CC21)C4(C)C3O[Si](C)(C)C2534.6Semi standard non polar33892256
(ent-15beta)-15-Hydroxy-19-trachylobanoic acid,1TBDMS,isomer #1CC1(C(=O)O[Si](C)(C)C(C)(C)C)CCCC2(C)C1CCC13CC4C(CC21)C4(C)C3O2881.8Semi standard non polar33892256
(ent-15beta)-15-Hydroxy-19-trachylobanoic acid,1TBDMS,isomer #2CC1(C(=O)O)CCCC2(C)C1CCC13CC4C(CC21)C4(C)C3O[Si](C)(C)C(C)(C)C2952.1Semi standard non polar33892256
(ent-15beta)-15-Hydroxy-19-trachylobanoic acid,2TBDMS,isomer #1CC1(C(=O)O[Si](C)(C)C(C)(C)C)CCCC2(C)C1CCC13CC4C(CC21)C4(C)C3O[Si](C)(C)C(C)(C)C3047.5Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - (ent-15beta)-15-Hydroxy-19-trachylobanoic acid GC-MS (Non-derivatized) - 70eV, Positivesplash10-0udi-5394000000-337b088c7f7925f09afc2017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (ent-15beta)-15-Hydroxy-19-trachylobanoic acid GC-MS (2 TMS) - 70eV, Positivesplash10-006t-9036600000-cf300ccc616e3c8efc262017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (ent-15beta)-15-Hydroxy-19-trachylobanoic acid GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (ent-15beta)-15-Hydroxy-19-trachylobanoic acid GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (ent-15beta)-15-Hydroxy-19-trachylobanoic acid 10V, Positive-QTOFsplash10-0uxr-0049000000-61f9f606707e152dff0e2015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (ent-15beta)-15-Hydroxy-19-trachylobanoic acid 20V, Positive-QTOFsplash10-0zgi-0295000000-c3f9644e7a9625bc33962015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (ent-15beta)-15-Hydroxy-19-trachylobanoic acid 40V, Positive-QTOFsplash10-0aor-5970000000-092246a2ed6e70b95e1d2015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (ent-15beta)-15-Hydroxy-19-trachylobanoic acid 10V, Negative-QTOFsplash10-014i-0069000000-99df82d2accafd9a25bc2015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (ent-15beta)-15-Hydroxy-19-trachylobanoic acid 20V, Negative-QTOFsplash10-06dj-0093000000-347444462e602f772ad52015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (ent-15beta)-15-Hydroxy-19-trachylobanoic acid 40V, Negative-QTOFsplash10-0a4i-1091000000-783cd1b640f4e40d17652015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (ent-15beta)-15-Hydroxy-19-trachylobanoic acid 10V, Negative-QTOFsplash10-014i-0009000000-062ad2a35e11d303cf232021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (ent-15beta)-15-Hydroxy-19-trachylobanoic acid 20V, Negative-QTOFsplash10-014i-0009000000-062ad2a35e11d303cf232021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (ent-15beta)-15-Hydroxy-19-trachylobanoic acid 40V, Negative-QTOFsplash10-014i-1009000000-ccc99b100decfcf422772021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (ent-15beta)-15-Hydroxy-19-trachylobanoic acid 10V, Positive-QTOFsplash10-01b9-0098000000-acc22a07ab5e6edf097e2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (ent-15beta)-15-Hydroxy-19-trachylobanoic acid 20V, Positive-QTOFsplash10-01di-0093000000-8efb5bd4f03a205c78352021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (ent-15beta)-15-Hydroxy-19-trachylobanoic acid 40V, Positive-QTOFsplash10-0a4i-7960000000-c6b172908bef2f473a182021-09-22Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB015790
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound131752061
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.