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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 22:21:12 UTC
Update Date2022-03-07 02:55:11 UTC
HMDB IDHMDB0037109
Secondary Accession Numbers
  • HMDB37109
Metabolite Identification
Common Name(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol
Description(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol belongs to the class of organic compounds known as phenylnaphthalenes. Phenylnaphthalenes are compounds containing a phenylnaphthalene skeleton, which consists of a naphthalene bound to a phenyl group (1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol has been detected, but not quantified in, fruits. This could make (1S,2R,3S)-2,3-dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol a potential biomarker for the consumption of these foods. Based on a literature review very few articles have been published on (1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol.
Structure
Data?1563862978
SynonymsNot Available
Chemical FormulaC19H16O4
Average Molecular Weight308.3279
Monoisotopic Molecular Weight308.104859
IUPAC Name4-(4-hydroxyphenyl)-2,3-dihydro-1H-phenalene-1,2,3-triol
Traditional Name4-(4-hydroxyphenyl)-2,3-dihydro-1H-phenalene-1,2,3-triol
CAS Registry NumberNot Available
SMILES
OC1C(O)C2=CC=CC3=C2C(C1O)=C(C=C3)C1=CC=C(O)C=C1
InChI Identifier
InChI=1S/C19H16O4/c20-12-7-4-10(5-8-12)13-9-6-11-2-1-3-14-15(11)16(13)18(22)19(23)17(14)21/h1-9,17-23H
InChI KeySPLDXWBMWDTALK-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as phenylnaphthalenes. Phenylnaphthalenes are compounds containing a phenylnaphthalene skeleton, which consists of a naphthalene bound to a phenyl group.
KingdomOrganic compounds
Super ClassBenzenoids
ClassNaphthalenes
Sub ClassPhenylnaphthalenes
Direct ParentPhenylnaphthalenes
Alternative Parents
Substituents
  • Phenylnaphthalene
  • Phenalane
  • 1-hydroxy-2-unsubstituted benzenoid
  • Phenol
  • Monocyclic benzene moiety
  • Secondary alcohol
  • Polyol
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Organooxygen compound
  • Alcohol
  • Aromatic homopolycyclic compound
Molecular FrameworkAromatic homopolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.092 g/LALOGPS
logP1.93ALOGPS
logP2.09ChemAxon
logS-3.5ALOGPS
pKa (Strongest Acidic)9.82ChemAxon
pKa (Strongest Basic)-3.4ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count4ChemAxon
Polar Surface Area80.92 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity86.59 m³·mol⁻¹ChemAxon
Polarizability32.04 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+172.35131661259
DarkChem[M-H]-170.47931661259
DeepCCS[M+H]+177.95530932474
DeepCCS[M-H]-175.59730932474
DeepCCS[M-2H]-209.64430932474
DeepCCS[M+Na]+184.87130932474
AllCCS[M+H]+174.832859911
AllCCS[M+H-H2O]+171.432859911
AllCCS[M+NH4]+178.032859911
AllCCS[M+Na]+178.932859911
AllCCS[M-H]-176.432859911
AllCCS[M+Na-2H]-175.732859911
AllCCS[M+HCOO]-175.132859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triolOC1C(O)C2=CC=CC3=C2C(C1O)=C(C=C3)C1=CC=C(O)C=C14675.0Standard polar33892256
(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triolOC1C(O)C2=CC=CC3=C2C(C1O)=C(C=C3)C1=CC=C(O)C=C13152.2Standard non polar33892256
(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triolOC1C(O)C2=CC=CC3=C2C(C1O)=C(C=C3)C1=CC=C(O)C=C13238.1Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol,1TMS,isomer #1C[Si](C)(C)OC1C(O)C2=C3C(=C(C4=CC=C(O)C=C4)C=CC3=CC=C2)C1O3348.5Semi standard non polar33892256
(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol,1TMS,isomer #2C[Si](C)(C)OC1C2=C3C(=C(C4=CC=C(O)C=C4)C=CC3=CC=C2)C(O)C1O3341.0Semi standard non polar33892256
(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol,1TMS,isomer #3C[Si](C)(C)OC1C2=C3C(=CC=CC3=CC=C2C2=CC=C(O)C=C2)C(O)C1O3361.8Semi standard non polar33892256
(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol,1TMS,isomer #4C[Si](C)(C)OC1=CC=C(C2=CC=C3C=CC=C4C3=C2C(O)C(O)C4O)C=C13346.0Semi standard non polar33892256
(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol,2TMS,isomer #1C[Si](C)(C)OC1C2=C3C(=C(C4=CC=C(O)C=C4)C=CC3=CC=C2)C(O)C1O[Si](C)(C)C3239.5Semi standard non polar33892256
(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol,2TMS,isomer #2C[Si](C)(C)OC1=CC=C(C2=CC=C3C=CC=C4C3=C2C(O)C(O[Si](C)(C)C)C4O)C=C13183.4Semi standard non polar33892256
(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol,2TMS,isomer #3C[Si](C)(C)OC1C2=C3C(=CC=CC3=CC=C2C2=CC=C(O)C=C2)C(O)C1O[Si](C)(C)C3236.0Semi standard non polar33892256
(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol,2TMS,isomer #4C[Si](C)(C)OC1=CC=C(C2=CC=C3C=CC=C4C3=C2C(O)C(O)C4O[Si](C)(C)C)C=C13247.8Semi standard non polar33892256
(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol,2TMS,isomer #5C[Si](C)(C)OC1C2=C3C(=C(C4=CC=C(O)C=C4)C=CC3=CC=C2)C(O[Si](C)(C)C)C1O3258.2Semi standard non polar33892256
(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol,2TMS,isomer #6C[Si](C)(C)OC1=CC=C(C2=CC=C3C=CC=C4C3=C2C(O[Si](C)(C)C)C(O)C4O)C=C13248.9Semi standard non polar33892256
(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol,3TMS,isomer #1C[Si](C)(C)OC1=CC=C(C2=CC=C3C=CC=C4C3=C2C(O)C(O[Si](C)(C)C)C4O[Si](C)(C)C)C=C13101.1Semi standard non polar33892256
(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol,3TMS,isomer #2C[Si](C)(C)OC1C2=C3C(=C(C4=CC=C(O)C=C4)C=CC3=CC=C2)C(O[Si](C)(C)C)C1O[Si](C)(C)C3130.9Semi standard non polar33892256
(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol,3TMS,isomer #3C[Si](C)(C)OC1=CC=C(C2=CC=C3C=CC=C4C3=C2C(O[Si](C)(C)C)C(O[Si](C)(C)C)C4O)C=C13096.9Semi standard non polar33892256
(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol,3TMS,isomer #4C[Si](C)(C)OC1=CC=C(C2=CC=C3C=CC=C4C3=C2C(O[Si](C)(C)C)C(O)C4O[Si](C)(C)C)C=C13105.7Semi standard non polar33892256
(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol,4TMS,isomer #1C[Si](C)(C)OC1=CC=C(C2=CC=C3C=CC=C4C3=C2C(O[Si](C)(C)C)C(O[Si](C)(C)C)C4O[Si](C)(C)C)C=C13070.9Semi standard non polar33892256
(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC1C(O)C2=C3C(=C(C4=CC=C(O)C=C4)C=CC3=CC=C2)C1O3592.8Semi standard non polar33892256
(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC1C2=C3C(=C(C4=CC=C(O)C=C4)C=CC3=CC=C2)C(O)C1O3580.8Semi standard non polar33892256
(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol,1TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC1C2=C3C(=CC=CC3=CC=C2C2=CC=C(O)C=C2)C(O)C1O3593.3Semi standard non polar33892256
(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol,1TBDMS,isomer #4CC(C)(C)[Si](C)(C)OC1=CC=C(C2=CC=C3C=CC=C4C3=C2C(O)C(O)C4O)C=C13599.4Semi standard non polar33892256
(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC1C2=C3C(=C(C4=CC=C(O)C=C4)C=CC3=CC=C2)C(O)C1O[Si](C)(C)C(C)(C)C3782.0Semi standard non polar33892256
(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC1=CC=C(C2=CC=C3C=CC=C4C3=C2C(O)C(O[Si](C)(C)C(C)(C)C)C4O)C=C13732.1Semi standard non polar33892256
(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol,2TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC1C2=C3C(=CC=CC3=CC=C2C2=CC=C(O)C=C2)C(O)C1O[Si](C)(C)C(C)(C)C3774.7Semi standard non polar33892256
(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol,2TBDMS,isomer #4CC(C)(C)[Si](C)(C)OC1=CC=C(C2=CC=C3C=CC=C4C3=C2C(O)C(O)C4O[Si](C)(C)C(C)(C)C)C=C13771.6Semi standard non polar33892256
(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol,2TBDMS,isomer #5CC(C)(C)[Si](C)(C)OC1C2=C3C(=C(C4=CC=C(O)C=C4)C=CC3=CC=C2)C(O[Si](C)(C)C(C)(C)C)C1O3778.0Semi standard non polar33892256
(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol,2TBDMS,isomer #6CC(C)(C)[Si](C)(C)OC1=CC=C(C2=CC=C3C=CC=C4C3=C2C(O[Si](C)(C)C(C)(C)C)C(O)C4O)C=C13760.4Semi standard non polar33892256
(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC1=CC=C(C2=CC=C3C=CC=C4C3=C2C(O)C(O[Si](C)(C)C(C)(C)C)C4O[Si](C)(C)C(C)(C)C)C=C13853.2Semi standard non polar33892256
(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol,3TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC1C2=C3C(=C(C4=CC=C(O)C=C4)C=CC3=CC=C2)C(O[Si](C)(C)C(C)(C)C)C1O[Si](C)(C)C(C)(C)C3819.8Semi standard non polar33892256
(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol,3TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC1=CC=C(C2=CC=C3C=CC=C4C3=C2C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C4O)C=C13813.1Semi standard non polar33892256
(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol,3TBDMS,isomer #4CC(C)(C)[Si](C)(C)OC1=CC=C(C2=CC=C3C=CC=C4C3=C2C(O[Si](C)(C)C(C)(C)C)C(O)C4O[Si](C)(C)C(C)(C)C)C=C13828.6Semi standard non polar33892256
(1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC1=CC=C(C2=CC=C3C=CC=C4C3=C2C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C4O[Si](C)(C)C(C)(C)C)C=C13940.0Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - (1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol GC-MS (Non-derivatized) - 70eV, Positivesplash10-0002-0090000000-c4d1c886388a13f0c2832017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol GC-MS (4 TMS) - 70eV, Positivesplash10-001i-1000190000-0033f0348ef6ddac7a6a2017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol 10V, Positive-QTOFsplash10-0a4i-0039000000-0cd2901d4cfba10c9d712016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol 20V, Positive-QTOFsplash10-0a4l-1093000000-66f388739bffc63022fb2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol 40V, Positive-QTOFsplash10-022d-0190000000-fa2eb7317658c128d6d62016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol 10V, Negative-QTOFsplash10-0a4i-0009000000-0fc0e99ce1aea05ea2a72016-08-04Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol 20V, Negative-QTOFsplash10-0a4i-0049000000-9e39b08402d6dbdbda3e2016-08-04Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol 40V, Negative-QTOFsplash10-00kb-0090000000-c4207bfb56911bb620762016-08-04Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol 10V, Negative-QTOFsplash10-0a4i-0009000000-f7e77fb1a377e56b8e6d2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol 20V, Negative-QTOFsplash10-0a4i-0098000000-6ff19a8b5558eb0d18302021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol 40V, Negative-QTOFsplash10-014j-0090000000-a361cf33d7e1224d5ed62021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol 10V, Positive-QTOFsplash10-0a4i-0039000000-5d7c6f7778da9cab718c2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol 20V, Positive-QTOFsplash10-0abc-0094000000-82e8aee257c72a8ac2062021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (1S,2R,3S)-2,3-Dihydro-4-(4-hydroxyphenyl)-1H-phenalene-1,2,3-triol 40V, Positive-QTOFsplash10-01wb-0090000000-608c1b88b5f9888ff7db2021-09-23Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Extracellular
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB016102
KNApSAcK IDNot Available
Chemspider ID35014373
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound74027047
PDB IDNot Available
ChEBI ID174945
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .