Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-12 01:35:19 UTC
Update Date2023-02-21 17:27:29 UTC
HMDB IDHMDB0040042
Secondary Accession Numbers
  • HMDB40042
Metabolite Identification
Common Name3-[(5-Methyl-2-furanyl)methyl]-1H-pyrrole
Description3-[(5-Methyl-2-furanyl)methyl]-1H-pyrrole, also known as 2-methyl-5-(3-pyrrolylmethyl)furan, belongs to the class of organic compounds known as substituted pyrroles. These are heterocyclic compounds containing a pyrrole ring substituted at one or more positions. 3-[(5-Methyl-2-furanyl)methyl]-1H-pyrrole is a secondary metabolite. Secondary metabolites are metabolically or physiologically non-essential metabolites that may serve a role as defense or signalling molecules. In some cases they are simply molecules that arise from the incomplete metabolism of other secondary metabolites. Based on a literature review very few articles have been published on 3-[(5-Methyl-2-furanyl)methyl]-1H-pyrrole.
Structure
Data?1677000449
Synonyms
ValueSource
2-Methyl-5-(3-pyrrolylmethyl)furanChEBI
3-(5-Methylfurfuryl)pyrroleHMDB
Chemical FormulaC10H11NO
Average Molecular Weight161.2004
Monoisotopic Molecular Weight161.084063979
IUPAC Name3-[(5-methylfuran-2-yl)methyl]-1H-pyrrole
Traditional Name3-[(5-methylfuran-2-yl)methyl]-1H-pyrrole
CAS Registry Number118248-37-6
SMILES
CC1=CC=C(CC2=CNC=C2)O1
InChI Identifier
InChI=1S/C10H11NO/c1-8-2-3-10(12-8)6-9-4-5-11-7-9/h2-5,7,11H,6H2,1H3
InChI KeyWKJYTIFWOMZIGZ-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as substituted pyrroles. These are heterocyclic compounds containing a pyrrole ring substituted at one or more positions.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassPyrroles
Sub ClassSubstituted pyrroles
Direct ParentSubstituted pyrroles
Alternative Parents
Substituents
  • Substituted pyrrole
  • Heteroaromatic compound
  • Furan
  • Oxacycle
  • Azacycle
  • Organic nitrogen compound
  • Organic oxygen compound
  • Organopnictogen compound
  • Hydrocarbon derivative
  • Organooxygen compound
  • Organonitrogen compound
  • Aromatic heteromonocyclic compound
Molecular FrameworkAromatic heteromonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water Solubility167.6 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.32 g/LALOGPS
logP2.56ALOGPS
logP2.25ChemAxon
logS-2.7ALOGPS
pKa (Strongest Acidic)17.91ChemAxon
pKa (Strongest Basic)-2.4ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count0ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area28.93 ŲChemAxon
Rotatable Bond Count2ChemAxon
Refractivity48.25 m³·mol⁻¹ChemAxon
Polarizability17.96 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+134.94531661259
DarkChem[M-H]-134.57331661259
DeepCCS[M+H]+139.08130932474
DeepCCS[M-H]-136.70630932474
DeepCCS[M-2H]-172.33830932474
DeepCCS[M+Na]+147.15930932474
AllCCS[M+H]+132.232859911
AllCCS[M+H-H2O]+127.432859911
AllCCS[M+NH4]+136.732859911
AllCCS[M+Na]+138.032859911
AllCCS[M-H]-134.332859911
AllCCS[M+Na-2H]-134.832859911
AllCCS[M+HCOO]-135.532859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
3-[(5-Methyl-2-furanyl)methyl]-1H-pyrroleCC1=CC=C(CC2=CNC=C2)O12296.8Standard polar33892256
3-[(5-Methyl-2-furanyl)methyl]-1H-pyrroleCC1=CC=C(CC2=CNC=C2)O11336.3Standard non polar33892256
3-[(5-Methyl-2-furanyl)methyl]-1H-pyrroleCC1=CC=C(CC2=CNC=C2)O11440.5Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
3-[(5-Methyl-2-furanyl)methyl]-1H-pyrrole,1TMS,isomer #1CC1=CC=C(CC2=CN([Si](C)(C)C)C=C2)O11644.9Semi standard non polar33892256
3-[(5-Methyl-2-furanyl)methyl]-1H-pyrrole,1TMS,isomer #1CC1=CC=C(CC2=CN([Si](C)(C)C)C=C2)O11661.4Standard non polar33892256
3-[(5-Methyl-2-furanyl)methyl]-1H-pyrrole,1TBDMS,isomer #1CC1=CC=C(CC2=CN([Si](C)(C)C(C)(C)C)C=C2)O11886.9Semi standard non polar33892256
3-[(5-Methyl-2-furanyl)methyl]-1H-pyrrole,1TBDMS,isomer #1CC1=CC=C(CC2=CN([Si](C)(C)C(C)(C)C)C=C2)O11848.0Standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 3-[(5-Methyl-2-furanyl)methyl]-1H-pyrrole GC-MS (Non-derivatized) - 70eV, Positivesplash10-03ea-9700000000-5551067a9ba1fca9ac6a2017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 3-[(5-Methyl-2-furanyl)methyl]-1H-pyrrole GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-[(5-Methyl-2-furanyl)methyl]-1H-pyrrole 10V, Positive-QTOFsplash10-03di-0900000000-efcd11ee932dad2c4e562017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-[(5-Methyl-2-furanyl)methyl]-1H-pyrrole 20V, Positive-QTOFsplash10-01qi-4900000000-bdeb17ca07bb678642da2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-[(5-Methyl-2-furanyl)methyl]-1H-pyrrole 40V, Positive-QTOFsplash10-0uea-9000000000-b059e9920de47e5a89ff2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-[(5-Methyl-2-furanyl)methyl]-1H-pyrrole 10V, Negative-QTOFsplash10-03di-0900000000-e983fd25207a23a34b7f2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-[(5-Methyl-2-furanyl)methyl]-1H-pyrrole 20V, Negative-QTOFsplash10-03di-1900000000-0d1bd4ca0dc6d35fd5a82017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-[(5-Methyl-2-furanyl)methyl]-1H-pyrrole 40V, Negative-QTOFsplash10-0gbc-9400000000-3f6839e4956b64735ebd2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-[(5-Methyl-2-furanyl)methyl]-1H-pyrrole 10V, Positive-QTOFsplash10-03di-1900000000-922ac6b4a7e3a70b56532021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-[(5-Methyl-2-furanyl)methyl]-1H-pyrrole 20V, Positive-QTOFsplash10-03dl-4900000000-605e860453b738faeb392021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-[(5-Methyl-2-furanyl)methyl]-1H-pyrrole 40V, Positive-QTOFsplash10-0ufu-9200000000-c31bae45a1c14b26c26f2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-[(5-Methyl-2-furanyl)methyl]-1H-pyrrole 10V, Negative-QTOFsplash10-03di-0900000000-6ec64d4968bd893692782021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-[(5-Methyl-2-furanyl)methyl]-1H-pyrrole 20V, Negative-QTOFsplash10-02tc-4900000000-4530cc327695bfc52d382021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-[(5-Methyl-2-furanyl)methyl]-1H-pyrrole 40V, Negative-QTOFsplash10-0f6x-9700000000-273ed5d84489c85de9392021-09-22Wishart LabView Spectrum

IR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M-H]-)2023-02-04FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+H]+)2023-02-04FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+)2023-02-04FELIX labView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB019729
KNApSAcK IDNot Available
Chemspider ID30777403
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound55297595
PDB IDNot Available
ChEBI ID134432
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1881671
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .