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Showing metabocard for 2,3-Dihydro-6-methyl-1H-pyrrolizine-5-carboxaldehyde (HMDB0040047)

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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-12 01:35:36 UTC
Update Date2023-02-21 17:27:30 UTC
HMDB IDHMDB0040047
Secondary Accession Numbers
  • HMDB40047
Metabolite Identification
Common Name2,3-Dihydro-6-methyl-1H-pyrrolizine-5-carboxaldehyde
Description2,3-Dihydro-6-methyl-1H-pyrrolizine-5-carboxaldehyde belongs to the class of organic compounds known as pyrrolizines. Pyrrolizines are compounds containing a pyrrolizine moiety, which consists of a pyrrole ring fused to a pyrrolidine ring. 2,3-Dihydro-6-methyl-1H-pyrrolizine-5-carboxaldehyde has been detected, but not quantified in, alcoholic beverages and green vegetables. This could make 2,3-dihydro-6-methyl-1H-pyrrolizine-5-carboxaldehyde a potential biomarker for the consumption of these foods. Based on a literature review very few articles have been published on 2,3-Dihydro-6-methyl-1H-pyrrolizine-5-carboxaldehyde.
Structure
Data?1677000450
MOL3D MOLSDF3D SDFPDB3D PDBSMILESInChI

MOL for HMDB0040047 (2,3-Dihydro-6-methyl-1H-pyrrolizine-5-carboxaldehyde)


  Mrv0541 05061311352D          

 11 12  0  0  0  0            999 V2000
    2.8792    1.4924    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4849    1.4924    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    2.1599    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5692    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8242    2.9445    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0542    1.4924    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7846    1.0799    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5692    2.1599    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7846    1.9049    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.2721    3.5576    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  3  2  1  0  0  0  0
  4  2  1  0  0  0  0
  7  1  1  0  0  0  0
  7  5  1  0  0  0  0
  8  3  1  0  0  0  0
  8  5  2  0  0  0  0
  9  6  1  0  0  0  0
  9  7  2  0  0  0  0
 10  4  1  0  0  0  0
 10  8  1  0  0  0  0
 10  9  1  0  0  0  0
 11  6  2  0  0  0  0
M  END
Download

3D MOL for HMDB0040047 (2,3-Dihydro-6-methyl-1H-pyrrolizine-5-carboxaldehyde)

HMDB0040047
     RDKit          3D
2,3-Dihydro-6-methyl-1H-pyrrolizine-5-carboxaldehyde
 22 23  0  0  0  0  0  0  0  0999 V2000
    3.0452   -0.6821   -0.0114 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5527   -0.4931   -0.0442 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6218   -1.4949   -0.0417 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6156   -0.8983   -0.0778 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4362    0.4196   -0.1013 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.8719    0.6965   -0.0816 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4957    2.0461   -0.0972 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7493    2.1342   -0.0746 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7337    1.0918   -0.1393 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6326    0.0604    0.5514 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0983   -1.1969   -0.1012 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2867   -1.7057    0.3493 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4022   -0.5060   -1.0340 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4748    0.0453    0.6912 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7867   -2.5774   -0.0164 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9086    2.9340   -0.1268 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7371    2.0561    0.3579 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0653    1.1056   -1.1988 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4457   -0.0054    1.6224 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6918    0.2571    0.2958 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3382   -2.1098    0.4347 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4011   -1.1774   -1.1563 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  2  0
  5  9  1  0
  9 10  1  0
 10 11  1  0
  6  2  2  0
 11  4  1  0
  1 12  1  0
  1 13  1  0
  1 14  1  0
  3 15  1  0
  7 16  1  0
  9 17  1  0
  9 18  1  0
 10 19  1  0
 10 20  1  0
 11 21  1  0
 11 22  1  0
M  END
Download

3D SDF for HMDB0040047 (2,3-Dihydro-6-methyl-1H-pyrrolizine-5-carboxaldehyde)


  Mrv0541 05061311352D          

 11 12  0  0  0  0            999 V2000
    2.8792    1.4924    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4849    1.4924    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    2.1599    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5692    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8242    2.9445    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0542    1.4924    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7846    1.0799    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5692    2.1599    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7846    1.9049    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.2721    3.5576    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  3  2  1  0  0  0  0
  4  2  1  0  0  0  0
  7  1  1  0  0  0  0
  7  5  1  0  0  0  0
  8  3  1  0  0  0  0
  8  5  2  0  0  0  0
  9  6  1  0  0  0  0
  9  7  2  0  0  0  0
 10  4  1  0  0  0  0
 10  8  1  0  0  0  0
 10  9  1  0  0  0  0
 11  6  2  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0040047

> <DATABASE_NAME>
hmdb

> <SMILES>
CC1=C(C=O)N2CCCC2=C1

> <INCHI_IDENTIFIER>
InChI=1S/C9H11NO/c1-7-5-8-3-2-4-10(8)9(7)6-11/h5-6H,2-4H2,1H3

> <INCHI_KEY>
NWFQKPJYEJRQRI-UHFFFAOYSA-N

> <FORMULA>
C9H11NO

> <MOLECULAR_WEIGHT>
149.1897

> <EXACT_MASS>
149.084063979

> <JCHEM_ACCEPTOR_COUNT>
1

> <JCHEM_AVERAGE_POLARIZABILITY>
16.730988446625325

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
6-methyl-2,3-dihydro-1H-pyrrolizine-5-carbaldehyde

> <ALOGPS_LOGP>
1.33

> <JCHEM_LOGP>
1.671281687

> <ALOGPS_LOGS>
-2.06

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_BASIC>
-7.490039269561416

> <JCHEM_POLAR_SURFACE_AREA>
22

> <JCHEM_REFRACTIVITY>
45.1583

> <JCHEM_ROTATABLE_BOND_COUNT>
1

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.30e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
2-methyl-6,7-dihydro-5H-pyrrolizine-3-carbaldehyde

> <JCHEM_VEBER_RULE>
1

$$$$
Download

3D-SDF for HMDB0040047 (2,3-Dihydro-6-methyl-1H-pyrrolizine-5-carboxaldehyde)

HMDB0040047
     RDKit          3D
2,3-Dihydro-6-methyl-1H-pyrrolizine-5-carboxaldehyde
 22 23  0  0  0  0  0  0  0  0999 V2000
    3.0452   -0.6821   -0.0114 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5527   -0.4931   -0.0442 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6218   -1.4949   -0.0417 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6156   -0.8983   -0.0778 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4362    0.4196   -0.1013 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.8719    0.6965   -0.0816 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4957    2.0461   -0.0972 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7493    2.1342   -0.0746 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7337    1.0918   -0.1393 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6326    0.0604    0.5514 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0983   -1.1969   -0.1012 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2867   -1.7057    0.3493 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4022   -0.5060   -1.0340 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4748    0.0453    0.6912 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7867   -2.5774   -0.0164 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9086    2.9340   -0.1268 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7371    2.0561    0.3579 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0653    1.1056   -1.1988 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4457   -0.0054    1.6224 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6918    0.2571    0.2958 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3382   -2.1098    0.4347 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4011   -1.1774   -1.1563 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  2  0
  5  9  1  0
  9 10  1  0
 10 11  1  0
  6  2  2  0
 11  4  1  0
  1 12  1  0
  1 13  1  0
  1 14  1  0
  3 15  1  0
  7 16  1  0
  9 17  1  0
  9 18  1  0
 10 19  1  0
 10 20  1  0
 11 21  1  0
 11 22  1  0
M  END
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PDB for HMDB0040047 (2,3-Dihydro-6-methyl-1H-pyrrolizine-5-carboxaldehyde)

HEADER    PROTEIN                                 06-MAY-13   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   06-MAY-13         0                                  
HETATM    1  C   UNK     0       5.375   2.786   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -0.905   2.786   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       0.000   1.540   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       0.000   4.032   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       2.929   1.540   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       3.405   5.496   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       3.835   2.786   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       1.465   2.016   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       2.929   4.032   0.000  0.00  0.00           C+0
HETATM   10  N   UNK     0       1.465   3.556   0.000  0.00  0.00           N+0
HETATM   11  O   UNK     0       2.375   6.641   0.000  0.00  0.00           O+0
CONECT    1    7                                                            
CONECT    2    3    4                                                       
CONECT    3    2    8                                                       
CONECT    4    2   10                                                       
CONECT    5    7    8                                                       
CONECT    6    9   11                                                       
CONECT    7    1    5    9                                                  
CONECT    8    3    5   10                                                  
CONECT    9    6    7   10                                                  
CONECT   10    4    8    9                                                  
CONECT   11    6                                                            
MASTER        0    0    0    0    0    0    0    0   11    0   24    0
END
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3D PDB for HMDB0040047 (2,3-Dihydro-6-methyl-1H-pyrrolizine-5-carboxaldehyde)

COMPND    HMDB0040047
HETATM    1  C1  UNL     1       3.045  -0.682  -0.011  1.00  0.00           C  
HETATM    2  C2  UNL     1       1.553  -0.493  -0.044  1.00  0.00           C  
HETATM    3  C3  UNL     1       0.622  -1.495  -0.042  1.00  0.00           C  
HETATM    4  C4  UNL     1      -0.616  -0.898  -0.078  1.00  0.00           C  
HETATM    5  N1  UNL     1      -0.436   0.420  -0.101  1.00  0.00           N  
HETATM    6  C5  UNL     1       0.872   0.697  -0.082  1.00  0.00           C  
HETATM    7  C6  UNL     1       1.496   2.046  -0.097  1.00  0.00           C  
HETATM    8  O1  UNL     1       2.749   2.134  -0.075  1.00  0.00           O  
HETATM    9  C7  UNL     1      -1.734   1.092  -0.139  1.00  0.00           C  
HETATM   10  C8  UNL     1      -2.633   0.060   0.551  1.00  0.00           C  
HETATM   11  C9  UNL     1      -2.098  -1.197  -0.101  1.00  0.00           C  
HETATM   12  H1  UNL     1       3.287  -1.706   0.349  1.00  0.00           H  
HETATM   13  H2  UNL     1       3.402  -0.506  -1.034  1.00  0.00           H  
HETATM   14  H3  UNL     1       3.475   0.045   0.691  1.00  0.00           H  
HETATM   15  H4  UNL     1       0.787  -2.577  -0.016  1.00  0.00           H  
HETATM   16  H5  UNL     1       0.909   2.934  -0.127  1.00  0.00           H  
HETATM   17  H6  UNL     1      -1.737   2.056   0.358  1.00  0.00           H  
HETATM   18  H7  UNL     1      -2.065   1.106  -1.199  1.00  0.00           H  
HETATM   19  H8  UNL     1      -2.446  -0.005   1.622  1.00  0.00           H  
HETATM   20  H9  UNL     1      -3.692   0.257   0.296  1.00  0.00           H  
HETATM   21  H10 UNL     1      -2.338  -2.110   0.435  1.00  0.00           H  
HETATM   22  H11 UNL     1      -2.401  -1.177  -1.156  1.00  0.00           H  
CONECT    1    2   12   13   14
CONECT    2    3    6    6
CONECT    3    4    4   15
CONECT    4    5   11
CONECT    5    6    9
CONECT    6    7
CONECT    7    8    8   16
CONECT    9   10   17   18
CONECT   10   11   19   20
CONECT   11   21   22
END
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SMILES for HMDB0040047 (2,3-Dihydro-6-methyl-1H-pyrrolizine-5-carboxaldehyde)

CC1=C(C=O)N2CCCC2=C1
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INCHI for HMDB0040047 (2,3-Dihydro-6-methyl-1H-pyrrolizine-5-carboxaldehyde)

InChI=1S/C9H11NO/c1-7-5-8-3-2-4-10(8)9(7)6-11/h5-6H,2-4H2,1H3
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View in JSmolView Stereo Labels
Synonyms
ValueSource
5-Formyl-2,3-dihydro-6-methyl-1H-pyrrolizineHMDB
Chemical FormulaC9H11NO
Average Molecular Weight149.1897
Monoisotopic Molecular Weight149.084063979
IUPAC Name6-methyl-2,3-dihydro-1H-pyrrolizine-5-carbaldehyde
Traditional Name2-methyl-6,7-dihydro-5H-pyrrolizine-3-carbaldehyde
CAS Registry Number55041-87-7
SMILES
CC1=C(C=O)N2CCCC2=C1
InChI Identifier
InChI=1S/C9H11NO/c1-7-5-8-3-2-4-10(8)9(7)6-11/h5-6H,2-4H2,1H3
InChI KeyNWFQKPJYEJRQRI-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as pyrrolizines. Pyrrolizines are compounds containing a pyrrolizine moiety, which consists of a pyrrole ring fused to a pyrrolidine ring.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassPyrrolizines
Sub ClassNot Available
Direct ParentPyrrolizines
Alternative Parents
Substituents
  • Pyrrolizine
  • Aryl-aldehyde
  • Substituted pyrrole
  • Heteroaromatic compound
  • Pyrrole
  • Azacycle
  • Organic nitrogen compound
  • Organic oxygen compound
  • Organopnictogen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Organonitrogen compound
  • Aldehyde
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Biological locationRoute of exposureSource
ProcessNot Available
Role
Biological role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water Solubility445.7 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility1.3 g/LALOGPS
logP1.33ALOGPS
logP1.67ChemAxon
logS-2.1ALOGPS
pKa (Strongest Basic)-7.5ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area22 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity45.16 m³·mol⁻¹ChemAxon
Polarizability16.73 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+130.84331661259
DarkChem[M-H]-126.58831661259
DeepCCS[M+H]+137.25330932474
DeepCCS[M-H]-133.95630932474
DeepCCS[M-2H]-170.90830932474
DeepCCS[M+Na]+146.44630932474
AllCCS[M+H]+129.432859911
AllCCS[M+H-H2O]+124.732859911
AllCCS[M+NH4]+133.832859911
AllCCS[M+Na]+135.132859911
AllCCS[M-H]-132.032859911
AllCCS[M+Na-2H]-132.932859911
AllCCS[M+HCOO]-133.932859911

Predicted Retention Times

Underivatized

Chromatographic MethodRetention TimeReference
Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. 3.48 minutes32390414
Predicted by Siyang on May 30, 202213.148 minutes33406817
Predicted by Siyang using ReTip algorithm on June 8, 20222.39 minutes32390414
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid1571.8 seconds40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid458.2 seconds40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid161.1 seconds40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid263.1 seconds40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid94.9 seconds40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid486.5 seconds40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid558.2 seconds40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)113.3 seconds40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid1045.8 seconds40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid339.4 seconds40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid1257.3 seconds40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid311.8 seconds40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid379.1 seconds40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate451.3 seconds40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA450.4 seconds40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water68.1 seconds40023050

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
2,3-Dihydro-6-methyl-1H-pyrrolizine-5-carboxaldehydeCC1=C(C=O)N2CCCC2=C12175.5Standard polar33892256
2,3-Dihydro-6-methyl-1H-pyrrolizine-5-carboxaldehydeCC1=C(C=O)N2CCCC2=C11459.8Standard non polar33892256
2,3-Dihydro-6-methyl-1H-pyrrolizine-5-carboxaldehydeCC1=C(C=O)N2CCCC2=C11495.0Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 2,3-Dihydro-6-methyl-1H-pyrrolizine-5-carboxaldehyde GC-MS (Non-derivatized) - 70eV, Positivesplash10-006t-1900000000-62cd992972d3602970e72017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 2,3-Dihydro-6-methyl-1H-pyrrolizine-5-carboxaldehyde GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2,3-Dihydro-6-methyl-1H-pyrrolizine-5-carboxaldehyde 10V, Positive-QTOFsplash10-0udi-0900000000-4c2337e3e5fbfb7ef14d2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2,3-Dihydro-6-methyl-1H-pyrrolizine-5-carboxaldehyde 20V, Positive-QTOFsplash10-0uk9-0900000000-4ad52713532635ece37a2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2,3-Dihydro-6-methyl-1H-pyrrolizine-5-carboxaldehyde 40V, Positive-QTOFsplash10-0kl3-9500000000-efd70d4f564b79f96aac2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2,3-Dihydro-6-methyl-1H-pyrrolizine-5-carboxaldehyde 10V, Negative-QTOFsplash10-0002-0900000000-13e8a3facda446cd68b72017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2,3-Dihydro-6-methyl-1H-pyrrolizine-5-carboxaldehyde 20V, Negative-QTOFsplash10-0002-0900000000-b48d3e2047a3c8fc311e2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2,3-Dihydro-6-methyl-1H-pyrrolizine-5-carboxaldehyde 40V, Negative-QTOFsplash10-109r-6900000000-ff56fab335fe1536909a2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2,3-Dihydro-6-methyl-1H-pyrrolizine-5-carboxaldehyde 10V, Positive-QTOFsplash10-0udi-0900000000-9af9545646e88ac306aa2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2,3-Dihydro-6-methyl-1H-pyrrolizine-5-carboxaldehyde 20V, Positive-QTOFsplash10-0udi-0900000000-19d20f04b003d77245712021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2,3-Dihydro-6-methyl-1H-pyrrolizine-5-carboxaldehyde 40V, Positive-QTOFsplash10-0zgi-9300000000-8cd538b17e1cdb50fcf52021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2,3-Dihydro-6-methyl-1H-pyrrolizine-5-carboxaldehyde 10V, Negative-QTOFsplash10-0002-0900000000-501cee3100f52e247e052021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2,3-Dihydro-6-methyl-1H-pyrrolizine-5-carboxaldehyde 20V, Negative-QTOFsplash10-00dj-0900000000-e082c11396c9cada70352021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2,3-Dihydro-6-methyl-1H-pyrrolizine-5-carboxaldehyde 40V, Negative-QTOFsplash10-0kmi-1900000000-779bca2f313208e7c7c22021-09-23Wishart LabView Spectrum

IR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+H]+)2023-02-04FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+)2023-02-04FELIX labView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Extracellular
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB019734
KNApSAcK IDNot Available
Chemspider ID4934503
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound6429126
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1628891
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .