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Record Information

Version

5.0

Status

Expected but not Quantified

Creation Date

2012-09-12 03:37:01 UTC

Update Date

2022-03-07 02:57:09 UTC

HMDB ID

HMDB0041698

Secondary Accession Numbers

HMDB41698

Metabolite Identification

Common Name

6-Hydroxydihydrodaidzein

Description

6-Hydroxydihydrodaidzein, also known as 4'67-trihydroxyisoflavanone, belongs to the class of organic compounds known as isoflavanones. These are polycyclic compounds containing an isoflavan skeleton which bears a ketone at position C4. Based on a literature review very few articles have been published on 6-Hydroxydihydrodaidzein.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI

HMDB0041698
     RDKit          3D
6-Hydroxydihydrodaidzein
 32 34  0  0  0  0  0  0  0  0999 V2000
    0.2181    2.1406    0.3229 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4959    1.0515   -0.2132 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7348    0.3891    0.1670 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5012    0.7927    1.2404 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6765    0.1486    1.5850 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4599    0.5432    2.6637 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.0938   -0.9294    0.8319 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2761   -1.6301    1.1241 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3534   -1.3599   -0.2469 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1853   -0.7096   -0.5788 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3975   -1.0968   -1.6536 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0079   -0.9436   -1.5798 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4267    0.4656   -1.2093 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8303    0.4193   -0.7317 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8303    1.0743   -1.4142 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1547    1.0319   -0.9655 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4837    0.3295    0.1742 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8106    0.2860    0.6251 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4683   -0.3188    0.8421 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1468   -0.2872    0.4104 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1883    1.6400    1.8452 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1994    1.3274    3.2483 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8727   -1.3878    1.8856 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6622   -2.1966   -0.8449 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4219   -1.1396   -2.5866 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3673   -1.6985   -0.8499 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3548    1.0701   -2.1287 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6130    1.6377   -2.3148 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9500    1.5355   -1.4825 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3711   -0.4876    0.2535 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6968   -0.8772    1.7386 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3810   -0.8204    0.9799 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  1  0
  5  7  2  0
  7  8  1  0
  7  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  2  0
 15 16  1  0
 16 17  2  0
 17 18  1  0
 17 19  1  0
 19 20  2  0
 13  2  1  0
 20 14  1  0
 10  3  1  0
  4 21  1  0
  6 22  1  0
  8 23  1  0
  9 24  1  0
 12 25  1  0
 12 26  1  0
 13 27  1  0
 15 28  1  0
 16 29  1  0
 18 30  1  0
 19 31  1  0
 20 32  1  0
M  END


  Mrv0541 02271201302D          

 20 22  0  0  0  0            999 V2000
    1.7861   -1.5957    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0716   -1.1832    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0716   -0.3582    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7861    0.0543    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5005   -0.3582    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5005   -1.1832    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2150   -1.5957    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2152    1.2918    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5008    0.8793    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5008    0.0543    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7863   -0.3582    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0718    0.0543    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0718    0.8793    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7863    1.2918    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3573    1.2918    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.3571    0.8793    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3571    0.0543    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3573   -0.3582    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3573   -1.1832    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2153   -0.3582    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  1  6  2  0  0  0  0
  2  3  2  0  0  0  0
  3  4  1  0  0  0  0
  3 17  1  0  0  0  0
  4  5  2  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
  9 14  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 12 18  1  0  0  0  0
 13 14  2  0  0  0  0
 13 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  2  0  0  0  0
 10 20  1  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0041698

> <DATABASE_NAME>
hmdb

> <SMILES>
OC1=CC=C(C=C1)C1COC2=CC(O)=C(O)C=C2C1=O

> <INCHI_IDENTIFIER>
InChI=1S/C15H12O5/c16-9-3-1-8(2-4-9)11-7-20-14-6-13(18)12(17)5-10(14)15(11)19/h1-6,11,16-18H,7H2

> <INCHI_KEY>
ZAIJTQZQMCNJHG-UHFFFAOYSA-N

> <FORMULA>
C15H12O5

> <MOLECULAR_WEIGHT>
272.2528

> <EXACT_MASS>
272.068473494

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_AVERAGE_POLARIZABILITY>
26.771990209272605

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
6,7-dihydroxy-3-(4-hydroxyphenyl)-3,4-dihydro-2H-1-benzopyran-4-one

> <ALOGPS_LOGP>
2.47

> <JCHEM_LOGP>
2.0776581139999997

> <ALOGPS_LOGS>
-3.13

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
9.50235864661262

> <JCHEM_PKA_STRONGEST_ACIDIC>
7.868258143975199

> <JCHEM_PKA_STRONGEST_BASIC>
-4.891092976520586

> <JCHEM_POLAR_SURFACE_AREA>
86.99

> <JCHEM_REFRACTIVITY>
71.6765

> <JCHEM_ROTATABLE_BOND_COUNT>
1

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
2.03e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
6,7-dihydroxy-3-(4-hydroxyphenyl)-2,3-dihydro-1-benzopyran-4-one

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0041698
     RDKit          3D
6-Hydroxydihydrodaidzein
 32 34  0  0  0  0  0  0  0  0999 V2000
    0.2181    2.1406    0.3229 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4959    1.0515   -0.2132 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7348    0.3891    0.1670 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5012    0.7927    1.2404 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6765    0.1486    1.5850 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4599    0.5432    2.6637 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.0938   -0.9294    0.8319 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2761   -1.6301    1.1241 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3534   -1.3599   -0.2469 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1853   -0.7096   -0.5788 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3975   -1.0968   -1.6536 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0079   -0.9436   -1.5798 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4267    0.4656   -1.2093 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8303    0.4193   -0.7317 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8303    1.0743   -1.4142 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1547    1.0319   -0.9655 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4837    0.3295    0.1742 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8106    0.2860    0.6251 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4683   -0.3188    0.8421 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1468   -0.2872    0.4104 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1883    1.6400    1.8452 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1994    1.3274    3.2483 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8727   -1.3878    1.8856 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6622   -2.1966   -0.8449 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4219   -1.1396   -2.5866 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3673   -1.6985   -0.8499 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3548    1.0701   -2.1287 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6130    1.6377   -2.3148 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9500    1.5355   -1.4825 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3711   -0.4876    0.2535 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6968   -0.8772    1.7386 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3810   -0.8204    0.9799 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  1  0
  5  7  2  0
  7  8  1  0
  7  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  2  0
 15 16  1  0
 16 17  2  0
 17 18  1  0
 17 19  1  0
 19 20  2  0
 13  2  1  0
 20 14  1  0
 10  3  1  0
  4 21  1  0
  6 22  1  0
  8 23  1  0
  9 24  1  0
 12 25  1  0
 12 26  1  0
 13 27  1  0
 15 28  1  0
 16 29  1  0
 18 30  1  0
 19 31  1  0
 20 32  1  0
M  END

HEADER    PROTEIN                                 27-FEB-12   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   27-FEB-12         0                                  
HETATM    1  C   UNK     0       3.334  -2.979   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       2.000  -2.209   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       2.000  -0.669   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       3.334   0.101   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       4.668  -0.669   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       4.668  -2.209   0.000  0.00  0.00           C+0
HETATM    7  O   UNK     0       6.001  -2.979   0.000  0.00  0.00           O+0
HETATM    8  O   UNK     0      -6.002   2.411   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0      -4.668   1.641   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -4.668   0.101   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      -3.334  -0.669   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      -2.001   0.101   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      -2.001   1.641   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      -3.334   2.411   0.000  0.00  0.00           C+0
HETATM   15  O   UNK     0      -0.667   2.411   0.000  0.00  0.00           O+0
HETATM   16  C   UNK     0       0.667   1.641   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       0.667   0.101   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      -0.667  -0.669   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0      -0.667  -2.209   0.000  0.00  0.00           O+0
HETATM   20  O   UNK     0      -6.002  -0.669   0.000  0.00  0.00           O+0
CONECT    1    2    6                                                       
CONECT    2    1    3                                                       
CONECT    3    2    4   17                                                  
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    1    5    7                                                  
CONECT    7    6                                                            
CONECT    8    9                                                            
CONECT    9    8   10   14                                                  
CONECT   10    9   11   20                                                  
CONECT   11   10   12                                                       
CONECT   12   11   13   18                                                  
CONECT   13   12   14   15                                                  
CONECT   14    9   13                                                       
CONECT   15   13   16                                                       
CONECT   16   15   17                                                       
CONECT   17    3   16   18                                                  
CONECT   18   12   17   19                                                  
CONECT   19   18                                                            
CONECT   20   10                                                            
MASTER        0    0    0    0    0    0    0    0   20    0   44    0
END

COMPND    HMDB0041698
HETATM    1  O1  UNL     1       0.218   2.141   0.323  1.00  0.00           O  
HETATM    2  C1  UNL     1       0.496   1.051  -0.213  1.00  0.00           C  
HETATM    3  C2  UNL     1       1.735   0.389   0.167  1.00  0.00           C  
HETATM    4  C3  UNL     1       2.501   0.793   1.240  1.00  0.00           C  
HETATM    5  C4  UNL     1       3.677   0.149   1.585  1.00  0.00           C  
HETATM    6  O2  UNL     1       4.460   0.543   2.664  1.00  0.00           O  
HETATM    7  C5  UNL     1       4.094  -0.929   0.832  1.00  0.00           C  
HETATM    8  O3  UNL     1       5.276  -1.630   1.124  1.00  0.00           O  
HETATM    9  C6  UNL     1       3.353  -1.360  -0.247  1.00  0.00           C  
HETATM   10  C7  UNL     1       2.185  -0.710  -0.579  1.00  0.00           C  
HETATM   11  O4  UNL     1       1.398  -1.097  -1.654  1.00  0.00           O  
HETATM   12  C8  UNL     1      -0.008  -0.944  -1.580  1.00  0.00           C  
HETATM   13  C9  UNL     1      -0.427   0.466  -1.209  1.00  0.00           C  
HETATM   14  C10 UNL     1      -1.830   0.419  -0.732  1.00  0.00           C  
HETATM   15  C11 UNL     1      -2.830   1.074  -1.414  1.00  0.00           C  
HETATM   16  C12 UNL     1      -4.155   1.032  -0.966  1.00  0.00           C  
HETATM   17  C13 UNL     1      -4.484   0.329   0.174  1.00  0.00           C  
HETATM   18  O5  UNL     1      -5.811   0.286   0.625  1.00  0.00           O  
HETATM   19  C14 UNL     1      -3.468  -0.319   0.842  1.00  0.00           C  
HETATM   20  C15 UNL     1      -2.147  -0.287   0.410  1.00  0.00           C  
HETATM   21  H1  UNL     1       2.188   1.640   1.845  1.00  0.00           H  
HETATM   22  H2  UNL     1       4.199   1.327   3.248  1.00  0.00           H  
HETATM   23  H3  UNL     1       5.873  -1.388   1.886  1.00  0.00           H  
HETATM   24  H4  UNL     1       3.662  -2.197  -0.845  1.00  0.00           H  
HETATM   25  H5  UNL     1      -0.422  -1.140  -2.587  1.00  0.00           H  
HETATM   26  H6  UNL     1      -0.367  -1.699  -0.850  1.00  0.00           H  
HETATM   27  H7  UNL     1      -0.355   1.070  -2.129  1.00  0.00           H  
HETATM   28  H8  UNL     1      -2.613   1.638  -2.315  1.00  0.00           H  
HETATM   29  H9  UNL     1      -4.950   1.536  -1.483  1.00  0.00           H  
HETATM   30  H10 UNL     1      -6.371  -0.488   0.254  1.00  0.00           H  
HETATM   31  H11 UNL     1      -3.697  -0.877   1.739  1.00  0.00           H  
HETATM   32  H12 UNL     1      -1.381  -0.820   0.980  1.00  0.00           H  
CONECT    1    2    2
CONECT    2    3   13
CONECT    3    4    4   10
CONECT    4    5   21
CONECT    5    6    7    7
CONECT    6   22
CONECT    7    8    9
CONECT    8   23
CONECT    9   10   10   24
CONECT   10   11
CONECT   11   12
CONECT   12   13   25   26
CONECT   13   14   27
CONECT   14   15   15   20
CONECT   15   16   28
CONECT   16   17   17   29
CONECT   17   18   19
CONECT   18   30
CONECT   19   20   20   31
CONECT   20   32
END

HMDB0041698
     RDKit          3D
6-Hydroxydihydrodaidzein
 32 34  0  0  0  0  0  0  0  0999 V2000
    0.2181    2.1406    0.3229 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4959    1.0515   -0.2132 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7348    0.3891    0.1670 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5012    0.7927    1.2404 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6765    0.1486    1.5850 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4599    0.5432    2.6637 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.0938   -0.9294    0.8319 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2761   -1.6301    1.1241 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3534   -1.3599   -0.2469 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1853   -0.7096   -0.5788 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3975   -1.0968   -1.6536 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0079   -0.9436   -1.5798 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4267    0.4656   -1.2093 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8303    0.4193   -0.7317 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8303    1.0743   -1.4142 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1547    1.0319   -0.9655 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4837    0.3295    0.1742 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8106    0.2860    0.6251 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4683   -0.3188    0.8421 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1468   -0.2872    0.4104 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1883    1.6400    1.8452 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1994    1.3274    3.2483 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8727   -1.3878    1.8856 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6622   -2.1966   -0.8449 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4219   -1.1396   -2.5866 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3673   -1.6985   -0.8499 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3548    1.0701   -2.1287 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6130    1.6377   -2.3148 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9500    1.5355   -1.4825 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3711   -0.4876    0.2535 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6968   -0.8772    1.7386 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3810   -0.8204    0.9799 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  1  0
  5  7  2  0
  7  8  1  0
  7  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  2  0
 15 16  1  0
 16 17  2  0
 17 18  1  0
 17 19  1  0
 19 20  2  0
 13  2  1  0
 20 14  1  0
 10  3  1  0
  4 21  1  0
  6 22  1  0
  8 23  1  0
  9 24  1  0
 12 25  1  0
 12 26  1  0
 13 27  1  0
 15 28  1  0
 16 29  1  0
 18 30  1  0
 19 31  1  0
 20 32  1  0
M  END

View in JSmol View Stereo Labels

Synonyms

Value	Source
4'67-Trihydroxyisoflavanone	HMDB
6,7,4'-Trihydroxyisoflavanone	HMDB

Chemical Formula

C₁₅H₁₂O₅

Average Molecular Weight

272.2528

Monoisotopic Molecular Weight

272.068473494

IUPAC Name

6,7-dihydroxy-3-(4-hydroxyphenyl)-3,4-dihydro-2H-1-benzopyran-4-one

Traditional Name

6,7-dihydroxy-3-(4-hydroxyphenyl)-2,3-dihydro-1-benzopyran-4-one

CAS Registry Number

Not Available

SMILES

OC1=CC=C(C=C1)C1COC2=CC(O)=C(O)C=C2C1=O

InChI Identifier

InChI=1S/C15H12O5/c16-9-3-1-8(2-4-9)11-7-20-14-6-13(18)12(17)5-10(14)15(11)19/h1-6,11,16-18H,7H2

InChI Key

ZAIJTQZQMCNJHG-UHFFFAOYSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as isoflavanones. These are polycyclic compounds containing an isoflavan skeleton which bears a ketone at position C4.

Kingdom

Organic compounds

Super Class

Phenylpropanoids and polyketides

Class

Isoflavonoids

Sub Class

Isoflavans

Direct Parent

Isoflavanones

Alternative Parents

Substituents

Hydroxyisoflavonoid
Isoflavanol
Isoflavanone
Chromone
Chromane
Benzopyran
1-benzopyran
Aryl alkyl ketone
Aryl ketone
Alkyl aryl ether
1-hydroxy-2-unsubstituted benzenoid
Phenol
Monocyclic benzene moiety
Benzenoid
Ketone
Oxacycle
Ether
Organoheterocyclic compound
Organooxygen compound
Hydrocarbon derivative
Organic oxide
Organic oxygen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Ontology

Not Available

Urine (PMID: 15506819)

Cellular substructure

Extracellular (HMDB: HMDB0041698)
Cytoplasm (HMDB: HMDB0041698)

Source

Exogenous

Exogenous (HMDB: HMDB0041698)

Food

Food (HMDB: HMDB0041698)

Endogenous

Plant

Plant (HMDB: HMDB0041698)

Process

Not Available

Role

Biological role

Nutrient (HMDB: HMDB0041698)

Physical Properties

State

Not Available

Experimental Molecular Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
Water Solubility	0.2 g/L	ALOGPS
logP	2.47	ALOGPS
logP	2.08	ChemAxon
logS	-3.1	ALOGPS
pKa (Strongest Acidic)	7.87	ChemAxon
pKa (Strongest Basic)	-4.9	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	86.99 Å²	ChemAxon
Rotatable Bond Count	1	ChemAxon
Refractivity	71.68 m³·mol⁻¹	ChemAxon
Polarizability	26.77 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
DarkChem	[M+H]+	163.772	31661259
DarkChem	[M-H]-	162.874	31661259
DeepCCS	[M+H]+	162.261	30932474
DeepCCS	[M-H]-	159.903	30932474
DeepCCS	[M-2H]-	192.79	30932474
DeepCCS	[M+Na]+	168.355	30932474
AllCCS	[M+H]+	162.3	32859911
AllCCS	[M+H-H2O]+	158.5	32859911
AllCCS	[M+NH4]+	165.9	32859911
AllCCS	[M+Na]+	166.9	32859911
AllCCS	[M-H]-	163.5	32859911
AllCCS	[M+Na-2H]-	162.8	32859911
AllCCS	[M+HCOO]-	162.3	32859911

Predicted Retention Times

Underivatized

Chromatographic Method	Retention Time	Reference
Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. Predicted by Afia on May 17, 2022.	5.68 minutes	32390414
Predicted by Siyang on May 30, 2022	11.3338 minutes	33406817
Predicted by Siyang using ReTip algorithm on June 8, 2022	1.41 minutes	32390414
AjsUoB = Accucore 150 Amide HILIC with 10mM Ammonium Formate, 0.1% Formic Acid	27.0 seconds	40023050
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid	1724.7 seconds	40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid	261.7 seconds	40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid	127.8 seconds	40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid	161.1 seconds	40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	173.2 seconds	40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid	537.3 seconds	40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid	456.4 seconds	40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)	121.4 seconds	40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid	902.7 seconds	40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid	373.2 seconds	40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid	1273.8 seconds	40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	315.0 seconds	40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	340.9 seconds	40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate	443.2 seconds	40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA	187.2 seconds	40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water	210.3 seconds	40023050

Predicted Kovats Retention Indices

Underivatized

Metabolite	SMILES	Kovats RI Value	Column Type	Reference
6-Hydroxydihydrodaidzein	OC1=CC=C(C=C1)C1COC2=CC(O)=C(O)C=C2C1=O	4098.1	Standard polar	33892256
6-Hydroxydihydrodaidzein	OC1=CC=C(C=C1)C1COC2=CC(O)=C(O)C=C2C1=O	2904.4	Standard non polar	33892256
6-Hydroxydihydrodaidzein	OC1=CC=C(C=C1)C1COC2=CC(O)=C(O)C=C2C1=O	2920.2	Semi standard non polar	33892256

Derivatized

Derivative Name / Structure	SMILES	Kovats RI Value	Column Type	Reference
6-Hydroxydihydrodaidzein,1TMS,isomer #1	C[Si](C)(C)OC1=CC=C(C2COC3=CC(O)=C(O)C=C3C2=O)C=C1	2934.6	Semi standard non polar	33892256
6-Hydroxydihydrodaidzein,1TMS,isomer #2	C[Si](C)(C)OC1=CC2=C(C=C1O)C(=O)C(C1=CC=C(O)C=C1)CO2	2880.9	Semi standard non polar	33892256
6-Hydroxydihydrodaidzein,1TMS,isomer #3	C[Si](C)(C)OC1=CC2=C(C=C1O)OCC(C1=CC=C(O)C=C1)C2=O	2890.1	Semi standard non polar	33892256
6-Hydroxydihydrodaidzein,2TMS,isomer #1	C[Si](C)(C)OC1=CC=C(C2COC3=CC(O[Si](C)(C)C)=C(O)C=C3C2=O)C=C1	2886.7	Semi standard non polar	33892256
6-Hydroxydihydrodaidzein,2TMS,isomer #2	C[Si](C)(C)OC1=CC=C(C2COC3=CC(O)=C(O[Si](C)(C)C)C=C3C2=O)C=C1	2898.1	Semi standard non polar	33892256
6-Hydroxydihydrodaidzein,2TMS,isomer #3	C[Si](C)(C)OC1=CC2=C(C=C1O[Si](C)(C)C)C(=O)C(C1=CC=C(O)C=C1)CO2	2889.0	Semi standard non polar	33892256
6-Hydroxydihydrodaidzein,3TMS,isomer #1	C[Si](C)(C)OC1=CC=C(C2COC3=CC(O[Si](C)(C)C)=C(O[Si](C)(C)C)C=C3C2=O)C=C1	2873.1	Semi standard non polar	33892256
6-Hydroxydihydrodaidzein,1TBDMS,isomer #1	CC(C)(C)[Si](C)(C)OC1=CC=C(C2COC3=CC(O)=C(O)C=C3C2=O)C=C1	3180.8	Semi standard non polar	33892256
6-Hydroxydihydrodaidzein,1TBDMS,isomer #2	CC(C)(C)[Si](C)(C)OC1=CC2=C(C=C1O)C(=O)C(C1=CC=C(O)C=C1)CO2	3143.2	Semi standard non polar	33892256
6-Hydroxydihydrodaidzein,1TBDMS,isomer #3	CC(C)(C)[Si](C)(C)OC1=CC2=C(C=C1O)OCC(C1=CC=C(O)C=C1)C2=O	3155.0	Semi standard non polar	33892256
6-Hydroxydihydrodaidzein,2TBDMS,isomer #1	CC(C)(C)[Si](C)(C)OC1=CC=C(C2COC3=CC(O[Si](C)(C)C(C)(C)C)=C(O)C=C3C2=O)C=C1	3406.9	Semi standard non polar	33892256
6-Hydroxydihydrodaidzein,2TBDMS,isomer #2	CC(C)(C)[Si](C)(C)OC1=CC=C(C2COC3=CC(O)=C(O[Si](C)(C)C(C)(C)C)C=C3C2=O)C=C1	3406.0	Semi standard non polar	33892256
6-Hydroxydihydrodaidzein,2TBDMS,isomer #3	CC(C)(C)[Si](C)(C)OC1=CC2=C(C=C1O[Si](C)(C)C(C)(C)C)C(=O)C(C1=CC=C(O)C=C1)CO2	3372.7	Semi standard non polar	33892256
6-Hydroxydihydrodaidzein,3TBDMS,isomer #1	CC(C)(C)[Si](C)(C)OC1=CC=C(C2COC3=CC(O[Si](C)(C)C(C)(C)C)=C(O[Si](C)(C)C(C)(C)C)C=C3C2=O)C=C1	3572.9	Semi standard non polar	33892256

Spectra

GC-MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted GC-MS	Predicted GC-MS Spectrum - 6-Hydroxydihydrodaidzein GC-MS (Non-derivatized) - 70eV, Positive	splash10-052f-3970000000-5576fb5b16be11b8f2c0	2017-09-01	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 6-Hydroxydihydrodaidzein GC-MS (3 TMS) - 70eV, Positive	splash10-01b9-3921600000-c96758c42d3621b2c8fb	2017-10-06	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 6-Hydroxydihydrodaidzein GC-MS (Non-derivatized) - 70eV, Positive	Not Available	2021-10-12	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 6-Hydroxydihydrodaidzein GC-MS (Non-derivatized) - 70eV, Positive	Not Available	2021-10-12	Wishart Lab	View Spectrum

MS/MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 6-Hydroxydihydrodaidzein 10V, Positive-QTOF	splash10-00di-0390000000-a6df35ce8e18a56d4bb2	2017-09-01	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 6-Hydroxydihydrodaidzein 20V, Positive-QTOF	splash10-0pi0-0940000000-e04a692d2ba6aeb3765e	2017-09-01	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 6-Hydroxydihydrodaidzein 40V, Positive-QTOF	splash10-0699-7900000000-f9aecc55774c4ae2d6cf	2017-09-01	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 6-Hydroxydihydrodaidzein 10V, Negative-QTOF	splash10-00di-0090000000-260933e1a32b4dc60db2	2017-09-01	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 6-Hydroxydihydrodaidzein 20V, Negative-QTOF	splash10-00di-0290000000-6757da7d92e453746d75	2017-09-01	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 6-Hydroxydihydrodaidzein 40V, Negative-QTOF	splash10-00kf-3940000000-483ec4122df572ed26ed	2017-09-01	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 6-Hydroxydihydrodaidzein 10V, Positive-QTOF	splash10-00di-0090000000-031a5312b116bdf1aa4a	2021-09-22	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 6-Hydroxydihydrodaidzein 20V, Positive-QTOF	splash10-00di-0290000000-b8f5ec364e0f82469253	2021-09-22	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 6-Hydroxydihydrodaidzein 40V, Positive-QTOF	splash10-05y3-5920000000-205f9e63a72dd1325abd	2021-09-22	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 6-Hydroxydihydrodaidzein 10V, Negative-QTOF	splash10-00di-0090000000-d6b6f6391b4e9f4522f4	2021-09-23	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 6-Hydroxydihydrodaidzein 20V, Negative-QTOF	splash10-00di-0190000000-2c1ff41cd89f8516b777	2021-09-23	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 6-Hydroxydihydrodaidzein 40V, Negative-QTOF	splash10-03y0-1970000000-fc8a3a1d801444ec4606	2021-09-23	Wishart Lab	View Spectrum

Biological Properties

Cellular Locations

Cytoplasm
Extracellular

Biospecimen Locations

Urine

Tissue Locations

Not Available

Pathways

Not Available

Name	SMPDB/PathBank	KEGG

Normal Concentrations

Biospecimen	Status	Value	Age	Sex	Condition	Reference	Details
Urine	Expected but not Quantified	Not Quantified	Not Available	Not Available	Consuming polyphenols described by Phenol-Explorer entry 905	15506819	details

Abnormal Concentrations

Not Available

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

FDB029863

KNApSAcK ID

Not Available

Chemspider ID

111361

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

125100

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

Not Available

References

Synthesis Reference

Not Available

Material Safety Data Sheet (MSDS)

Not Available

General References

Neveu V, Perez-Jimenez J, Vos F, Crespy V, du Chaffaut L, Mennen L, Knox C, Eisner R, Cruz J, Wishart D, Scalbert A: Phenol-Explorer: an online comprehensive database on polyphenol contents in foods. Database (Oxford). 2010;2010:bap024. doi: 10.1093/database/bap024. Epub 2010 Jan 8. [PubMed:20428313 ]

Showing metabocard for 6-Hydroxydihydrodaidzein (HMDB0041698)

MOL for HMDB0041698 (6-Hydroxydihydrodaidzein)

3D MOL for HMDB0041698 (6-Hydroxydihydrodaidzein)

3D SDF for HMDB0041698 (6-Hydroxydihydrodaidzein)

3D-SDF for HMDB0041698 (6-Hydroxydihydrodaidzein)

PDB for HMDB0041698 (6-Hydroxydihydrodaidzein)

3D PDB for HMDB0041698 (6-Hydroxydihydrodaidzein)

SMILES for HMDB0041698 (6-Hydroxydihydrodaidzein)

INCHI for HMDB0041698 (6-Hydroxydihydrodaidzein)

Structure for HMDB0041698 (6-Hydroxydihydrodaidzein)

3D Structure for HMDB0041698 (6-Hydroxydihydrodaidzein)

Predicted Collision Cross Sections

Predicted Retention Times

Underivatized

Predicted Kovats Retention Indices

Underivatized

Derivatized

GC-MS Spectra

MS/MS Spectra