Hmdb loader
Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2013-04-09 21:20:33 UTC
Update Date2022-09-22 18:35:12 UTC
HMDB IDHMDB0060026
Secondary Accession Numbers
  • HMDB60026
Metabolite Identification
Common NameVanilloylglycine
DescriptionVanilloylglycine belongs to the class of organic compounds known as hippuric acids. Hippuric acids are compounds containing hippuric acid, which consists of a of a benzoyl group linked to the N-terminal of a glycine. Vanilloylglycine is a moderately basic compound (based on its pKa). 3-Methoxy-4-hydroxyhippuric acid is one of the main catechins metabolites found in humans after consumption of green tea infusions.
Structure
Data?1563866006
Synonyms
ValueSource
2-[(4-Hydroxy-3-methoxybenzoyl)amino]acetic acidHMDB
3-Methoxy-4-hydroxyhippuric acidHMDB
2-{[hydroxy(4-hydroxy-3-methoxyphenyl)methylidene]amino}acetateGenerator
Chemical FormulaC10H11NO5
Average Molecular Weight225.198
Monoisotopic Molecular Weight225.063722467
IUPAC Name2-{[hydroxy(4-hydroxy-3-methoxyphenyl)methylidene]amino}acetic acid
Traditional Name{[hydroxy(4-hydroxy-3-methoxyphenyl)methylidene]amino}acetic acid
CAS Registry NumberNot Available
SMILES
COC1=C(O)C=CC(=C1)C(O)=NCC(O)=O
InChI Identifier
InChI=1S/C10H11NO5/c1-16-8-4-6(2-3-7(8)12)10(15)11-5-9(13)14/h2-4,12H,5H2,1H3,(H,11,15)(H,13,14)
InChI KeyLOODYTDRRBLQNH-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as hippuric acids. Hippuric acids are compounds containing hippuric acid, which consists of a of a benzoyl group linked to the N-terminal of a glycine.
KingdomOrganic compounds
Super ClassBenzenoids
ClassBenzene and substituted derivatives
Sub ClassBenzoic acids and derivatives
Direct ParentHippuric acids
Alternative Parents
Substituents
  • Hippuric acid
  • N-acyl-alpha amino acid or derivatives
  • N-acyl-alpha-amino acid
  • Alpha-amino acid or derivatives
  • Methoxyphenol
  • Phenoxy compound
  • Anisole
  • Benzoyl
  • Methoxybenzene
  • Phenol ether
  • Alkyl aryl ether
  • 1-hydroxy-2-unsubstituted benzenoid
  • Phenol
  • Carboxamide group
  • Secondary carboxylic acid amide
  • Carboxylic acid derivative
  • Carboxylic acid
  • Ether
  • Monocarboxylic acid or derivatives
  • Organic oxygen compound
  • Organic nitrogen compound
  • Hydrocarbon derivative
  • Carbonyl group
  • Organic oxide
  • Organopnictogen compound
  • Organooxygen compound
  • Organonitrogen compound
  • Aromatic homomonocyclic compound
Molecular FrameworkAromatic homomonocyclic compounds
External DescriptorsNot Available
Ontology
Not AvailableNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility2.24 g/LALOGPS
logP0.74ALOGPS
logP0.75ChemAxon
logS-2.5ALOGPS
pKa (Strongest Acidic)3.22ChemAxon
pKa (Strongest Basic)1.37ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area99.35 ŲChemAxon
Rotatable Bond Count4ChemAxon
Refractivity55.08 m³·mol⁻¹ChemAxon
Polarizability21.53 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+150.85131661259
DarkChem[M-H]-152.17331661259
DeepCCS[M+H]+147.02230932474
DeepCCS[M-H]-144.66430932474
DeepCCS[M-2H]-178.81730932474
DeepCCS[M+Na]+153.65130932474
AllCCS[M+H]+149.232859911
AllCCS[M+H-H2O]+145.332859911
AllCCS[M+NH4]+152.732859911
AllCCS[M+Na]+153.732859911
AllCCS[M-H]-148.432859911
AllCCS[M+Na-2H]-148.732859911
AllCCS[M+HCOO]-149.232859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
VanilloylglycineCOC1=C(O)C=CC(=C1)C(O)=NCC(O)=O3560.2Standard polar33892256
VanilloylglycineCOC1=C(O)C=CC(=C1)C(O)=NCC(O)=O2040.9Standard non polar33892256
VanilloylglycineCOC1=C(O)C=CC(=C1)C(O)=NCC(O)=O2106.6Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Vanilloylglycine,1TMS,isomer #1COC1=CC(C(O)=NCC(=O)O)=CC=C1O[Si](C)(C)C2213.6Semi standard non polar33892256
Vanilloylglycine,1TMS,isomer #2COC1=CC(C(=NCC(=O)O)O[Si](C)(C)C)=CC=C1O2142.9Semi standard non polar33892256
Vanilloylglycine,1TMS,isomer #3COC1=CC(C(O)=NCC(=O)O[Si](C)(C)C)=CC=C1O2221.6Semi standard non polar33892256
Vanilloylglycine,2TMS,isomer #1COC1=CC(C(=NCC(=O)O)O[Si](C)(C)C)=CC=C1O[Si](C)(C)C2132.7Semi standard non polar33892256
Vanilloylglycine,2TMS,isomer #2COC1=CC(C(O)=NCC(=O)O[Si](C)(C)C)=CC=C1O[Si](C)(C)C2221.4Semi standard non polar33892256
Vanilloylglycine,2TMS,isomer #3COC1=CC(C(=NCC(=O)O[Si](C)(C)C)O[Si](C)(C)C)=CC=C1O2169.4Semi standard non polar33892256
Vanilloylglycine,3TMS,isomer #1COC1=CC(C(=NCC(=O)O[Si](C)(C)C)O[Si](C)(C)C)=CC=C1O[Si](C)(C)C2227.3Semi standard non polar33892256
Vanilloylglycine,1TBDMS,isomer #1COC1=CC(C(O)=NCC(=O)O)=CC=C1O[Si](C)(C)C(C)(C)C2499.9Semi standard non polar33892256
Vanilloylglycine,1TBDMS,isomer #2COC1=CC(C(=NCC(=O)O)O[Si](C)(C)C(C)(C)C)=CC=C1O2429.6Semi standard non polar33892256
Vanilloylglycine,1TBDMS,isomer #3COC1=CC(C(O)=NCC(=O)O[Si](C)(C)C(C)(C)C)=CC=C1O2477.1Semi standard non polar33892256
Vanilloylglycine,2TBDMS,isomer #1COC1=CC(C(=NCC(=O)O)O[Si](C)(C)C(C)(C)C)=CC=C1O[Si](C)(C)C(C)(C)C2662.0Semi standard non polar33892256
Vanilloylglycine,2TBDMS,isomer #2COC1=CC(C(O)=NCC(=O)O[Si](C)(C)C(C)(C)C)=CC=C1O[Si](C)(C)C(C)(C)C2724.0Semi standard non polar33892256
Vanilloylglycine,2TBDMS,isomer #3COC1=CC(C(=NCC(=O)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)=CC=C1O2659.5Semi standard non polar33892256
Vanilloylglycine,3TBDMS,isomer #1COC1=CC(C(=NCC(=O)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)=CC=C1O[Si](C)(C)C(C)(C)C2883.1Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Vanilloylglycine GC-MS (Non-derivatized) - 70eV, Positivesplash10-0udi-1910000000-bb66a7ca5718ab36a3c62017-07-27Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Vanilloylglycine GC-MS (3 TMS) - 70eV, Positivesplash10-00b9-9026400000-fb5a1bad52a62ba591842017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Vanilloylglycine GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Vanilloylglycine GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Vanilloylglycine 10V, Positive-QTOFsplash10-004i-3490000000-a9300847707f92a0a0742017-06-28Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Vanilloylglycine 20V, Positive-QTOFsplash10-0un9-4920000000-be775c57516238d77dd62017-06-28Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Vanilloylglycine 40V, Positive-QTOFsplash10-0fmi-9700000000-3bb122542849083399742017-06-28Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Vanilloylglycine 10V, Negative-QTOFsplash10-00di-0290000000-4f92f07a3a935f792f5a2017-06-28Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Vanilloylglycine 20V, Negative-QTOFsplash10-00di-1970000000-70968ac99b79604070dd2017-06-28Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Vanilloylglycine 40V, Negative-QTOFsplash10-05fr-9800000000-302c7f6e7555688d77c72017-06-28Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Vanilloylglycine 10V, Positive-QTOFsplash10-0kdi-0970000000-73f4470a80941d26574b2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Vanilloylglycine 20V, Positive-QTOFsplash10-053r-3910000000-860d07b68446c2120eaa2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Vanilloylglycine 40V, Positive-QTOFsplash10-0umi-9800000000-afa10b712333fc9202972021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Vanilloylglycine 10V, Negative-QTOFsplash10-0089-0940000000-5506c039f861fe3063fe2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Vanilloylglycine 20V, Negative-QTOFsplash10-0bt9-1900000000-d1874abfc4291bca43dc2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Vanilloylglycine 40V, Negative-QTOFsplash10-05fr-6930000000-1ae7df8bd7e19e565a752021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
  • Urine
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
UrineDetected but not QuantifiedNot QuantifiedAdult (>18 years old)MaleNormal details
UrineDetected but not QuantifiedNot QuantifiedAdult (>18 years old)Both
Normal
details
Abnormal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodExpected but not QuantifiedNot QuantifiedAdult (>18 years old)BothAsthma details
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB030006
KNApSAcK IDNot Available
Chemspider ID2340857
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia Link3-Methoxy-4-hydroxyhippuric acid
METLIN IDNot Available
PubChem Compound3083688
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. van der Hooft JJ, de Vos RC, Mihaleva V, Bino RJ, Ridder L, de Roo N, Jacobs DM, van Duynhoven JP, Vervoort J: Structural elucidation and quantification of phenolic conjugates present in human urine after tea intake. Anal Chem. 2012 Aug 21;84(16):7263-71. doi: 10.1021/ac3017339. Epub 2012 Aug 2. [PubMed:22827565 ]