Record Information |
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Version | 5.0 |
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Status | Expected but not Quantified |
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Creation Date | 2017-03-23 05:27:20 UTC |
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Update Date | 2022-03-07 03:17:58 UTC |
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HMDB ID | HMDB0062675 |
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Secondary Accession Numbers | |
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Metabolite Identification |
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Common Name | 4beta,24S-dihydroxycholesterol |
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Description | 4beta,24S-dihydroxycholesterol belongs to the class of organic compounds known as trihydroxy bile acids, alcohols and derivatives. These are prenol lipids structurally characterized by a bile acid or alcohol which bears three hydroxyl groups. 4beta,24S-dihydroxycholesterol is an extremely weak basic (essentially neutral) compound (based on its pKa). |
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Structure | [H][C@](O)(CC[C@@]([H])(C)[C@@]1([H])CC[C@@]2([H])[C@]3([H])CC=C4[C@@]([H])(O)[C@@]([H])(O)CC[C@]4(C)[C@@]3([H])CC[C@]12C)C(C)C InChI=1S/C27H46O3/c1-16(2)23(28)11-6-17(3)19-9-10-20-18-7-8-22-25(30)24(29)13-15-27(22,5)21(18)12-14-26(19,20)4/h8,16-21,23-25,28-30H,6-7,9-15H2,1-5H3/t17-,18+,19-,20+,21+,23+,24+,25-,26-,27-/m1/s1 |
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Synonyms | Value | Source |
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(3beta,4beta,24S)-Cholest-5-ene-3,4,24-triol | ChEBI | (3b,4b,24S)-Cholest-5-ene-3,4,24-triol | Generator | (3Β,4β,24S)-cholest-5-ene-3,4,24-triol | Generator | 4b,24S-Dihydroxycholesterol | Generator | 4Β,24S-dihydroxycholesterol | Generator |
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Chemical Formula | C27H46O3 |
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Average Molecular Weight | 418.662 |
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Monoisotopic Molecular Weight | 418.344695341 |
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IUPAC Name | (1S,2R,5S,6R,10S,11S,14R,15R)-14-[(2R,5S)-5-hydroxy-6-methylheptan-2-yl]-2,15-dimethyltetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadec-7-ene-5,6-diol |
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Traditional Name | (1S,2R,5S,6R,10S,11S,14R,15R)-14-[(2R,5S)-5-hydroxy-6-methylheptan-2-yl]-2,15-dimethyltetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadec-7-ene-5,6-diol |
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CAS Registry Number | Not Available |
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SMILES | [H][C@](O)(CC[C@@]([H])(C)[C@@]1([H])CC[C@@]2([H])[C@]3([H])CC=C4[C@@]([H])(O)[C@@]([H])(O)CC[C@]4(C)[C@@]3([H])CC[C@]12C)C(C)C |
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InChI Identifier | InChI=1S/C27H46O3/c1-16(2)23(28)11-6-17(3)19-9-10-20-18-7-8-22-25(30)24(29)13-15-27(22,5)21(18)12-14-26(19,20)4/h8,16-21,23-25,28-30H,6-7,9-15H2,1-5H3/t17-,18+,19-,20+,21+,23+,24+,25-,26-,27-/m1/s1 |
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InChI Key | IWXJGKGAPXGSCN-GCUSXLOISA-N |
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Chemical Taxonomy |
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Description | Belongs to the class of organic compounds known as trihydroxy bile acids, alcohols and derivatives. These are prenol lipids structurally characterized by a bile acid or alcohol which bears three hydroxyl groups. |
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Kingdom | Organic compounds |
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Super Class | Lipids and lipid-like molecules |
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Class | Steroids and steroid derivatives |
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Sub Class | Bile acids, alcohols and derivatives |
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Direct Parent | Trihydroxy bile acids, alcohols and derivatives |
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Alternative Parents | |
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Substituents | - Trihydroxy bile acid, alcohol, or derivatives
- 24-hydroxysteroid
- 3-hydroxy-delta-5-steroid
- 3-hydroxysteroid
- 4-hydroxysteroid
- Hydroxysteroid
- 3-beta-hydroxy-delta-5-steroid
- 3-beta-hydroxysteroid
- Delta-5-steroid
- Cyclic alcohol
- Secondary alcohol
- Organic oxygen compound
- Alcohol
- Organooxygen compound
- Hydrocarbon derivative
- Aliphatic homopolycyclic compound
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Molecular Framework | Aliphatic homopolycyclic compounds |
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External Descriptors | |
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Ontology |
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Physiological effect | Not Available |
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Disposition | Not Available |
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Process | Not Available |
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Role | Not Available |
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Physical Properties |
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State | Not Available |
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Experimental Molecular Properties | Property | Value | Reference |
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Melting Point | Not Available | Not Available | Boiling Point | Not Available | Not Available | Water Solubility | 0.0057 g/l | ALOGPS | LogP | 4.86 | ALOGPS |
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Experimental Chromatographic Properties | Not Available |
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Predicted Molecular Properties | |
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Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Kovats Retention IndicesUnderivatizedDerivatizedDerivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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4beta,24S-dihydroxycholesterol,1TMS,isomer #1 | CC(C)[C@H](CC[C@@H](C)[C@H]1CC[C@H]2[C@@H]3CC=C4[C@@H](O)[C@@H](O)CC[C@]4(C)[C@H]3CC[C@@]21C)O[Si](C)(C)C | 3516.0 | Semi standard non polar | 33892256 | 4beta,24S-dihydroxycholesterol,1TMS,isomer #2 | CC(C)[C@@H](O)CC[C@@H](C)[C@H]1CC[C@H]2[C@@H]3CC=C4[C@@H](O[Si](C)(C)C)[C@@H](O)CC[C@]4(C)[C@H]3CC[C@@]21C | 3429.7 | Semi standard non polar | 33892256 | 4beta,24S-dihydroxycholesterol,1TMS,isomer #3 | CC(C)[C@@H](O)CC[C@@H](C)[C@H]1CC[C@H]2[C@@H]3CC=C4[C@@H](O)[C@@H](O[Si](C)(C)C)CC[C@]4(C)[C@H]3CC[C@@]21C | 3464.2 | Semi standard non polar | 33892256 | 4beta,24S-dihydroxycholesterol,2TMS,isomer #1 | CC(C)[C@H](CC[C@@H](C)[C@H]1CC[C@H]2[C@@H]3CC=C4[C@@H](O[Si](C)(C)C)[C@@H](O)CC[C@]4(C)[C@H]3CC[C@@]21C)O[Si](C)(C)C | 3419.0 | Semi standard non polar | 33892256 | 4beta,24S-dihydroxycholesterol,2TMS,isomer #2 | CC(C)[C@H](CC[C@@H](C)[C@H]1CC[C@H]2[C@@H]3CC=C4[C@@H](O)[C@@H](O[Si](C)(C)C)CC[C@]4(C)[C@H]3CC[C@@]21C)O[Si](C)(C)C | 3459.6 | Semi standard non polar | 33892256 | 4beta,24S-dihydroxycholesterol,2TMS,isomer #3 | CC(C)[C@@H](O)CC[C@@H](C)[C@H]1CC[C@H]2[C@@H]3CC=C4[C@@H](O[Si](C)(C)C)[C@@H](O[Si](C)(C)C)CC[C@]4(C)[C@H]3CC[C@@]21C | 3388.0 | Semi standard non polar | 33892256 | 4beta,24S-dihydroxycholesterol,3TMS,isomer #1 | CC(C)[C@H](CC[C@@H](C)[C@H]1CC[C@H]2[C@@H]3CC=C4[C@@H](O[Si](C)(C)C)[C@@H](O[Si](C)(C)C)CC[C@]4(C)[C@H]3CC[C@@]21C)O[Si](C)(C)C | 3391.1 | Semi standard non polar | 33892256 | 4beta,24S-dihydroxycholesterol,1TBDMS,isomer #1 | CC(C)[C@H](CC[C@@H](C)[C@H]1CC[C@H]2[C@@H]3CC=C4[C@@H](O)[C@@H](O)CC[C@]4(C)[C@H]3CC[C@@]21C)O[Si](C)(C)C(C)(C)C | 3766.5 | Semi standard non polar | 33892256 | 4beta,24S-dihydroxycholesterol,1TBDMS,isomer #2 | CC(C)[C@@H](O)CC[C@@H](C)[C@H]1CC[C@H]2[C@@H]3CC=C4[C@@H](O[Si](C)(C)C(C)(C)C)[C@@H](O)CC[C@]4(C)[C@H]3CC[C@@]21C | 3667.1 | Semi standard non polar | 33892256 | 4beta,24S-dihydroxycholesterol,1TBDMS,isomer #3 | CC(C)[C@@H](O)CC[C@@H](C)[C@H]1CC[C@H]2[C@@H]3CC=C4[C@@H](O)[C@@H](O[Si](C)(C)C(C)(C)C)CC[C@]4(C)[C@H]3CC[C@@]21C | 3690.1 | Semi standard non polar | 33892256 | 4beta,24S-dihydroxycholesterol,2TBDMS,isomer #1 | CC(C)[C@H](CC[C@@H](C)[C@H]1CC[C@H]2[C@@H]3CC=C4[C@@H](O[Si](C)(C)C(C)(C)C)[C@@H](O)CC[C@]4(C)[C@H]3CC[C@@]21C)O[Si](C)(C)C(C)(C)C | 3914.9 | Semi standard non polar | 33892256 | 4beta,24S-dihydroxycholesterol,2TBDMS,isomer #2 | CC(C)[C@H](CC[C@@H](C)[C@H]1CC[C@H]2[C@@H]3CC=C4[C@@H](O)[C@@H](O[Si](C)(C)C(C)(C)C)CC[C@]4(C)[C@H]3CC[C@@]21C)O[Si](C)(C)C(C)(C)C | 3941.6 | Semi standard non polar | 33892256 | 4beta,24S-dihydroxycholesterol,2TBDMS,isomer #3 | CC(C)[C@@H](O)CC[C@@H](C)[C@H]1CC[C@H]2[C@@H]3CC=C4[C@@H](O[Si](C)(C)C(C)(C)C)[C@@H](O[Si](C)(C)C(C)(C)C)CC[C@]4(C)[C@H]3CC[C@@]21C | 3821.6 | Semi standard non polar | 33892256 | 4beta,24S-dihydroxycholesterol,3TBDMS,isomer #1 | CC(C)[C@H](CC[C@@H](C)[C@H]1CC[C@H]2[C@@H]3CC=C4[C@@H](O[Si](C)(C)C(C)(C)C)[C@@H](O[Si](C)(C)C(C)(C)C)CC[C@]4(C)[C@H]3CC[C@@]21C)O[Si](C)(C)C(C)(C)C | 4037.8 | Semi standard non polar | 33892256 |
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| GC-MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
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Predicted GC-MS | Predicted GC-MS Spectrum - 4beta,24S-dihydroxycholesterol GC-MS (Non-derivatized) - 70eV, Positive | splash10-0udr-1009300000-e41981ddf6daeafdbf17 | 2017-09-20 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - 4beta,24S-dihydroxycholesterol GC-MS (3 TMS) - 70eV, Positive | splash10-00xr-2100159000-01bbaa6b2a8feb8d35b5 | 2017-10-06 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - 4beta,24S-dihydroxycholesterol GC-MS (Non-derivatized) - 70eV, Positive | Not Available | 2021-10-12 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - 4beta,24S-dihydroxycholesterol GC-MS (Non-derivatized) - 70eV, Positive | Not Available | 2021-10-12 | Wishart Lab | View Spectrum |
MS/MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
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Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 4beta,24S-dihydroxycholesterol 10V, Positive-QTOF | splash10-0uxr-0003900000-a5e88815375a8606350a | 2017-10-06 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 4beta,24S-dihydroxycholesterol 20V, Positive-QTOF | splash10-0f89-5109500000-922db04cf191f5914aae | 2017-10-06 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 4beta,24S-dihydroxycholesterol 40V, Positive-QTOF | splash10-074l-7139100000-ef4061a5a9a4fb4efcdf | 2017-10-06 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 4beta,24S-dihydroxycholesterol 10V, Negative-QTOF | splash10-014i-0002900000-2488715891f9b26feb11 | 2017-10-06 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 4beta,24S-dihydroxycholesterol 20V, Negative-QTOF | splash10-014j-0009800000-8a66d313cc241c612a5d | 2017-10-06 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 4beta,24S-dihydroxycholesterol 40V, Negative-QTOF | splash10-0fki-7009200000-a13f68ef66cdb4b5a4e2 | 2017-10-06 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 4beta,24S-dihydroxycholesterol 10V, Positive-QTOF | splash10-0kai-0209600000-7e924ac2c7c1bb617302 | 2021-09-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 4beta,24S-dihydroxycholesterol 20V, Positive-QTOF | splash10-06si-7419200000-f9e90530cbe26ac10b00 | 2021-09-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 4beta,24S-dihydroxycholesterol 40V, Positive-QTOF | splash10-06yo-8982000000-bee5b7b7791a5a4f1d99 | 2021-09-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 4beta,24S-dihydroxycholesterol 10V, Negative-QTOF | splash10-014i-0000900000-f2cb6399034352e924c8 | 2021-09-24 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 4beta,24S-dihydroxycholesterol 20V, Negative-QTOF | splash10-014i-0002900000-6466dddc3b24d18347fd | 2021-09-24 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 4beta,24S-dihydroxycholesterol 40V, Negative-QTOF | splash10-014i-0002900000-671406ee8f3741d2c8f3 | 2021-09-24 | Wishart Lab | View Spectrum |
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