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Version5.0
StatusExpected but not Quantified
Creation Date2017-03-23 05:49:55 UTC
Update Date2022-03-07 03:17:58 UTC
HMDB IDHMDB0062712
Secondary Accession Numbers
  • HMDB62712
Metabolite Identification
Common Name3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic Acid
Description3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic acid, also known as 3α,7β-dihydroxy-5β-cholest-24-en-26-Oate, belongs to the class of organic compounds known as dihydroxy bile acids, alcohols and derivatives. Dihydroxy bile acids, alcohols and derivatives are compounds containing or derived from a bile acid or alcohol, and which bears exactly two carboxylic acid groups. 3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic acid is a very hydrophobic molecule, practically insoluble (in water), and relatively neutral.
Structure
Data?1563866350
Synonyms
ValueSource
3a,7b-Dihydroxy-5b-cholest-24-en-26-OateGenerator
3a,7b-Dihydroxy-5b-cholest-24-en-26-Oic acidGenerator
3alpha,7beta-Dihydroxy-5beta-cholest-24-en-26-OateGenerator
3Α,7β-dihydroxy-5β-cholest-24-en-26-OateGenerator
3Α,7β-dihydroxy-5β-cholest-24-en-26-Oic acidGenerator
Chemical FormulaC27H44O4
Average Molecular Weight432.645
Monoisotopic Molecular Weight432.323959897
IUPAC Name(2E,6R)-6-[(1S,2S,5R,7S,9S,10R,11S,14R,15R)-5,9-dihydroxy-2,15-dimethyltetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadecan-14-yl]-2-methylhept-2-enoic acid
Traditional Name(2E,6R)-6-[(1S,2S,5R,7S,9S,10R,11S,14R,15R)-5,9-dihydroxy-2,15-dimethyltetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadecan-14-yl]-2-methylhept-2-enoic acid
CAS Registry NumberNot Available
SMILES
[H]\C(CC[C@@]([H])(C)[C@@]1([H])CC[C@@]2([H])[C@]3([H])[C@@]([H])(O)C[C@]4([H])C[C@]([H])(O)CC[C@]4(C)[C@@]3([H])CC[C@]12C)=C(\C)C(O)=O
InChI Identifier
InChI=1S/C27H44O4/c1-16(6-5-7-17(2)25(30)31)20-8-9-21-24-22(11-13-27(20,21)4)26(3)12-10-19(28)14-18(26)15-23(24)29/h7,16,18-24,28-29H,5-6,8-15H2,1-4H3,(H,30,31)/b17-7+/t16-,18+,19-,20-,21+,22+,23+,24+,26+,27-/m1/s1
InChI KeyVEEPNZJORQZZNC-FLTYDXKWSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as dihydroxy bile acids, alcohols and derivatives. Dihydroxy bile acids, alcohols and derivatives are compounds containing or derived from a bile acid or alcohol, and which bears exactly two carboxylic acid groups.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassSteroids and steroid derivatives
Sub ClassBile acids, alcohols and derivatives
Direct ParentDihydroxy bile acids, alcohols and derivatives
Alternative Parents
Substituents
  • Dihydroxy bile acid, alcohol, or derivatives
  • Steroid acid
  • 3-hydroxysteroid
  • 7-hydroxysteroid
  • 7-alpha-hydroxysteroid
  • 3-alpha-hydroxysteroid
  • Hydroxysteroid
  • Medium-chain fatty acid
  • Hydroxy fatty acid
  • Fatty acyl
  • Fatty acid
  • Unsaturated fatty acid
  • Cyclic alcohol
  • Secondary alcohol
  • Monocarboxylic acid or derivatives
  • Carboxylic acid
  • Carboxylic acid derivative
  • Hydrocarbon derivative
  • Organic oxide
  • Organic oxygen compound
  • Carbonyl group
  • Alcohol
  • Organooxygen compound
  • Aliphatic homopolycyclic compound
Molecular FrameworkAliphatic homopolycyclic compounds
External Descriptors
Ontology
Physiological effect
Disposition
ProcessNot Available
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water Solubility0.0049 g/lALOGPS
LogP4.06ALOGPS
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP4.06ALOGPS
logP5ChemAxon
logS-5ALOGPS
pKa (Strongest Acidic)4.91ChemAxon
pKa (Strongest Basic)-0.54ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area77.76 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity123.93 m³·mol⁻¹ChemAxon
Polarizability51.98 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M-2H]-224.78530932474
DeepCCS[M+Na]+198.61630932474
AllCCS[M+H]+210.732859911
AllCCS[M+H-H2O]+208.832859911
AllCCS[M+NH4]+212.432859911
AllCCS[M+Na]+212.832859911
AllCCS[M-H]-207.332859911
AllCCS[M+Na-2H]-209.332859911
AllCCS[M+HCOO]-211.732859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic Acid[H]\C(CC[C@@]([H])(C)[C@@]1([H])CC[C@@]2([H])[C@]3([H])[C@@]([H])(O)C[C@]4([H])C[C@]([H])(O)CC[C@]4(C)[C@@]3([H])CC[C@]12C)=C(\C)C(O)=O3806.5Standard polar33892256
3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic Acid[H]\C(CC[C@@]([H])(C)[C@@]1([H])CC[C@@]2([H])[C@]3([H])[C@@]([H])(O)C[C@]4([H])C[C@]([H])(O)CC[C@]4(C)[C@@]3([H])CC[C@]12C)=C(\C)C(O)=O3487.8Standard non polar33892256
3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic Acid[H]\C(CC[C@@]([H])(C)[C@@]1([H])CC[C@@]2([H])[C@]3([H])[C@@]([H])(O)C[C@]4([H])C[C@]([H])(O)CC[C@]4(C)[C@@]3([H])CC[C@]12C)=C(\C)C(O)=O3700.3Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic Acid,1TMS,isomer #1C/C(=C\CC[C@@H](C)[C@H]1CC[C@H]2[C@@H]3[C@@H](O[Si](C)(C)C)C[C@@H]4C[C@H](O)CC[C@]4(C)[C@H]3CC[C@@]21C)C(=O)O3647.7Semi standard non polar33892256
3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic Acid,1TMS,isomer #2C/C(=C\CC[C@@H](C)[C@H]1CC[C@H]2[C@@H]3[C@@H](O)C[C@@H]4C[C@H](O[Si](C)(C)C)CC[C@]4(C)[C@H]3CC[C@@]21C)C(=O)O3691.5Semi standard non polar33892256
3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic Acid,1TMS,isomer #3C/C(=C\CC[C@@H](C)[C@H]1CC[C@H]2[C@@H]3[C@@H](O)C[C@@H]4C[C@H](O)CC[C@]4(C)[C@H]3CC[C@@]21C)C(=O)O[Si](C)(C)C3575.0Semi standard non polar33892256
3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic Acid,2TMS,isomer #1C/C(=C\CC[C@@H](C)[C@H]1CC[C@H]2[C@@H]3[C@@H](O[Si](C)(C)C)C[C@@H]4C[C@H](O[Si](C)(C)C)CC[C@]4(C)[C@H]3CC[C@@]21C)C(=O)O3601.9Semi standard non polar33892256
3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic Acid,2TMS,isomer #2C/C(=C\CC[C@@H](C)[C@H]1CC[C@H]2[C@@H]3[C@@H](O[Si](C)(C)C)C[C@@H]4C[C@H](O)CC[C@]4(C)[C@H]3CC[C@@]21C)C(=O)O[Si](C)(C)C3494.1Semi standard non polar33892256
3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic Acid,2TMS,isomer #3C/C(=C\CC[C@@H](C)[C@H]1CC[C@H]2[C@@H]3[C@@H](O)C[C@@H]4C[C@H](O[Si](C)(C)C)CC[C@]4(C)[C@H]3CC[C@@]21C)C(=O)O[Si](C)(C)C3574.1Semi standard non polar33892256
3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic Acid,3TMS,isomer #1C/C(=C\CC[C@@H](C)[C@H]1CC[C@H]2[C@@H]3[C@@H](O[Si](C)(C)C)C[C@@H]4C[C@H](O[Si](C)(C)C)CC[C@]4(C)[C@H]3CC[C@@]21C)C(=O)O[Si](C)(C)C3462.2Semi standard non polar33892256
3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic Acid,1TBDMS,isomer #1C/C(=C\CC[C@@H](C)[C@H]1CC[C@H]2[C@@H]3[C@@H](O[Si](C)(C)C(C)(C)C)C[C@@H]4C[C@H](O)CC[C@]4(C)[C@H]3CC[C@@]21C)C(=O)O3861.5Semi standard non polar33892256
3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic Acid,1TBDMS,isomer #2C/C(=C\CC[C@@H](C)[C@H]1CC[C@H]2[C@@H]3[C@@H](O)C[C@@H]4C[C@H](O[Si](C)(C)C(C)(C)C)CC[C@]4(C)[C@H]3CC[C@@]21C)C(=O)O3905.6Semi standard non polar33892256
3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic Acid,1TBDMS,isomer #3C/C(=C\CC[C@@H](C)[C@H]1CC[C@H]2[C@@H]3[C@@H](O)C[C@@H]4C[C@H](O)CC[C@]4(C)[C@H]3CC[C@@]21C)C(=O)O[Si](C)(C)C(C)(C)C3824.5Semi standard non polar33892256
3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic Acid,2TBDMS,isomer #1C/C(=C\CC[C@@H](C)[C@H]1CC[C@H]2[C@@H]3[C@@H](O[Si](C)(C)C(C)(C)C)C[C@@H]4C[C@H](O[Si](C)(C)C(C)(C)C)CC[C@]4(C)[C@H]3CC[C@@]21C)C(=O)O4032.6Semi standard non polar33892256
3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic Acid,2TBDMS,isomer #2C/C(=C\CC[C@@H](C)[C@H]1CC[C@H]2[C@@H]3[C@@H](O[Si](C)(C)C(C)(C)C)C[C@@H]4C[C@H](O)CC[C@]4(C)[C@H]3CC[C@@]21C)C(=O)O[Si](C)(C)C(C)(C)C3940.2Semi standard non polar33892256
3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic Acid,2TBDMS,isomer #3C/C(=C\CC[C@@H](C)[C@H]1CC[C@H]2[C@@H]3[C@@H](O)C[C@@H]4C[C@H](O[Si](C)(C)C(C)(C)C)CC[C@]4(C)[C@H]3CC[C@@]21C)C(=O)O[Si](C)(C)C(C)(C)C4042.0Semi standard non polar33892256
3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic Acid,3TBDMS,isomer #1C/C(=C\CC[C@@H](C)[C@H]1CC[C@H]2[C@@H]3[C@@H](O[Si](C)(C)C(C)(C)C)C[C@@H]4C[C@H](O[Si](C)(C)C(C)(C)C)CC[C@]4(C)[C@H]3CC[C@@]21C)C(=O)O[Si](C)(C)C(C)(C)C4156.5Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic Acid GC-MS (Non-derivatized) - 70eV, Positivesplash10-0309-0457900000-cc73a19e64fa31f1b53f2017-09-20Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic Acid GC-MS (3 TMS) - 70eV, Positivesplash10-001i-1111159000-b56205aadf279e5de9332017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic Acid GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic Acid GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic Acid 10V, Positive-QTOFsplash10-014j-0008900000-c64db94c020dd767351e2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic Acid 20V, Positive-QTOFsplash10-014j-0009200000-03ca8a7bbe897370311b2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic Acid 40V, Positive-QTOFsplash10-014i-1119000000-15f504ca571fc8f833262017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic Acid 10V, Negative-QTOFsplash10-001i-0001900000-11d955c76d3b48e698822017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic Acid 20V, Negative-QTOFsplash10-02ar-0008900000-0109e749ef620e9114c22017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic Acid 40V, Negative-QTOFsplash10-06du-3009100000-f85c9c4277326bb498492017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic Acid 10V, Positive-QTOFsplash10-0159-1129800000-52cb06682672f538115f2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic Acid 20V, Positive-QTOFsplash10-0159-4039200000-23e99df4b15efe4032a12021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic Acid 40V, Positive-QTOFsplash10-052k-9470000000-1859bd72237a7e21c4512021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic Acid 10V, Negative-QTOFsplash10-001i-0002900000-316cf465d47e77e58ff32021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic Acid 20V, Negative-QTOFsplash10-0a4i-0009300000-f0d27ce78b418e64079b2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3alpha,7beta-dihydroxy-5beta-cholest-24-en-26-oic Acid 40V, Negative-QTOFsplash10-00wi-2009400000-dcde256274e23d422dde2021-09-24Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI ID72727
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.