| Record Information |
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| Version | 5.0 |
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| Status | Expected but not Quantified |
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| Creation Date | 2017-09-09 06:19:52 UTC |
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| Update Date | 2022-11-30 19:26:23 UTC |
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| HMDB ID | HMDB0115881 |
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| Secondary Accession Numbers | None |
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| Metabolite Identification |
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| Common Name | PA(i-21:0/i-15:0) |
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| Description | PA(i-21:0/i-15:0) is a phosphatidic acid. It is a glycerophospholipid in which a phosphate moiety occupies a glycerol substitution site. As is the case with diacylglycerols, phosphatidic acids can have many different combinations of fatty acids of varying lengths and saturation attached at the C-1 and C-2 positions. Fatty acids containing 16, 18 and 20 carbons are the most common. PA(i-21:0/i-15:0), in particular, consists of one chain of isoheneicosanoic acid at the C-1 position and one chain of isopentadecanoic acid at the C-2 position. Phosphatidic acids are quite rare but are extremely important as intermediates in the biosynthesis of triacylglycerols and phospholipids. |
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| Structure | [H][C@@](COC(=O)CCCCCCCCCCCCCCCCCC(C)C)(COP(O)(O)=O)OC(=O)CCCCCCCCCCCC(C)C InChI=1S/C39H77O8P/c1-35(2)29-25-21-17-13-10-8-6-5-7-9-11-15-19-23-27-31-38(40)45-33-37(34-46-48(42,43)44)47-39(41)32-28-24-20-16-12-14-18-22-26-30-36(3)4/h35-37H,5-34H2,1-4H3,(H2,42,43,44)/t37-/m1/s1 |
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| Synonyms | | Value | Source |
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| 1-Isoheneicosanoyl-2-isopentadecanoyl-sn-glycero-3-phosphate | HMDB | | 1-Isoheneicosanoyl-2-isopentadecanoyl-sn-phosphatidic acid | HMDB | | PA(36:0) | HMDB | | Phosphatidic acid(i-21:0/i-15:0) | HMDB | | Phosphatidic acid(36:0) | HMDB | | Phosphatidate(I-21:0/I-15:0) | HMDB | | Phosphatidate(36:0) | HMDB | | [(2R)-3-[(19-Methylicosanoyl)oxy]-2-[(13-methyltetradecanoyl)oxy]propoxy]phosphonate | HMDB | | PA(i-21:0/i-15:0) | SMPDB |
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| Chemical Formula | C39H77O8P |
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| Average Molecular Weight | 705.011 |
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| Monoisotopic Molecular Weight | 704.535606437 |
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| IUPAC Name | [(2R)-3-[(19-methylicosanoyl)oxy]-2-[(13-methyltetradecanoyl)oxy]propoxy]phosphonic acid |
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| Traditional Name | (2R)-3-[(19-methylicosanoyl)oxy]-2-[(13-methyltetradecanoyl)oxy]propoxyphosphonic acid |
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| CAS Registry Number | Not Available |
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| SMILES | [H][C@@](COC(=O)CCCCCCCCCCCCCCCCCC(C)C)(COP(O)(O)=O)OC(=O)CCCCCCCCCCCC(C)C |
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| InChI Identifier | InChI=1S/C39H77O8P/c1-35(2)29-25-21-17-13-10-8-6-5-7-9-11-15-19-23-27-31-38(40)45-33-37(34-46-48(42,43)44)47-39(41)32-28-24-20-16-12-14-18-22-26-30-36(3)4/h35-37H,5-34H2,1-4H3,(H2,42,43,44)/t37-/m1/s1 |
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| InChI Key | CTMSZEWDOARFII-DIPNUNPCSA-N |
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| Chemical Taxonomy |
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| Description | Belongs to the class of organic compounds known as 1,2-diacylglycerol-3-phosphates. These are glycerol-3-phosphates in which the glycerol moiety is bonded to two aliphatic chains through ester linkages. |
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| Kingdom | Organic compounds |
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| Super Class | Lipids and lipid-like molecules |
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| Class | Glycerophospholipids |
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| Sub Class | Glycerophosphates |
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| Direct Parent | 1,2-diacylglycerol-3-phosphates |
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| Alternative Parents | |
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| Substituents | - 1,2-diacylglycerol-3-phosphate
- Fatty acid ester
- Monoalkyl phosphate
- Dicarboxylic acid or derivatives
- Fatty acyl
- Alkyl phosphate
- Phosphoric acid ester
- Organic phosphoric acid derivative
- Carboxylic acid ester
- Carboxylic acid derivative
- Hydrocarbon derivative
- Organic oxide
- Organic oxygen compound
- Carbonyl group
- Organooxygen compound
- Aliphatic acyclic compound
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| Molecular Framework | Aliphatic acyclic compounds |
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| External Descriptors | Not Available |
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| Ontology |
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| Physiological effect | Not Available |
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| Disposition | |
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| Process | |
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| Role | Not Available |
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| Physical Properties |
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| State | Solid |
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| Experimental Molecular Properties | | Property | Value | Reference |
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| Melting Point | Not Available | Not Available | | Boiling Point | Not Available | Not Available | | Water Solubility | Not Available | Not Available | | LogP | Not Available | Not Available |
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| Experimental Chromatographic Properties | Not Available |
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| Predicted Molecular Properties | |
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| Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Retention Times Underivatized| Chromatographic Method | Retention Time | Reference |
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| Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. Predicted by Afia on May 17, 2022. | 10.25 minutes | 32390414 | | Predicted by Siyang on May 30, 2022 | 35.0404 minutes | 33406817 | | Predicted by Siyang using ReTip algorithm on June 8, 2022 | 2.27 minutes | 32390414 | | Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid | 5060.9 seconds | 40023050 | | Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid | 659.8 seconds | 40023050 | | Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid | 376.6 seconds | 40023050 | | Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid | 253.1 seconds | 40023050 | | RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 984.3 seconds | 40023050 | | Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid | 1782.0 seconds | 40023050 | | BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid | 1597.0 seconds | 40023050 | | HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate) | 138.4 seconds | 40023050 | | UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid | 3384.9 seconds | 40023050 | | BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid | 1097.9 seconds | 40023050 | | UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid | 2908.1 seconds | 40023050 | | SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 1298.2 seconds | 40023050 | | RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 731.8 seconds | 40023050 | | MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate | 697.7 seconds | 40023050 | | KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA | 793.8 seconds | 40023050 | | Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water | 9.4 seconds | 40023050 |
Predicted Kovats Retention IndicesUnderivatizedDerivatized| Derivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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| PA(i-21:0/i-15:0),1TMS,isomer #1 | CC(C)CCCCCCCCCCCCCCCCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C)OC(=O)CCCCCCCCCCCC(C)C | 4833.9 | Semi standard non polar | 33892256 | | PA(i-21:0/i-15:0),1TMS,isomer #1 | CC(C)CCCCCCCCCCCCCCCCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C)OC(=O)CCCCCCCCCCCC(C)C | 4220.4 | Standard non polar | 33892256 | | PA(i-21:0/i-15:0),1TMS,isomer #1 | CC(C)CCCCCCCCCCCCCCCCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C)OC(=O)CCCCCCCCCCCC(C)C | 5716.7 | Standard polar | 33892256 | | PA(i-21:0/i-15:0),2TMS,isomer #1 | CC(C)CCCCCCCCCCCCCCCCCC(=O)OC[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)OC(=O)CCCCCCCCCCCC(C)C | 4824.8 | Semi standard non polar | 33892256 | | PA(i-21:0/i-15:0),2TMS,isomer #1 | CC(C)CCCCCCCCCCCCCCCCCC(=O)OC[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)OC(=O)CCCCCCCCCCCC(C)C | 4249.4 | Standard non polar | 33892256 | | PA(i-21:0/i-15:0),2TMS,isomer #1 | CC(C)CCCCCCCCCCCCCCCCCC(=O)OC[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)OC(=O)CCCCCCCCCCCC(C)C | 5029.0 | Standard polar | 33892256 | | PA(i-21:0/i-15:0),1TBDMS,isomer #1 | CC(C)CCCCCCCCCCCCCCCCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C(C)(C)C)OC(=O)CCCCCCCCCCCC(C)C | 5054.1 | Semi standard non polar | 33892256 | | PA(i-21:0/i-15:0),1TBDMS,isomer #1 | CC(C)CCCCCCCCCCCCCCCCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C(C)(C)C)OC(=O)CCCCCCCCCCCC(C)C | 4346.5 | Standard non polar | 33892256 | | PA(i-21:0/i-15:0),1TBDMS,isomer #1 | CC(C)CCCCCCCCCCCCCCCCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C(C)(C)C)OC(=O)CCCCCCCCCCCC(C)C | 5684.3 | Standard polar | 33892256 |
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| MS/MS Spectra| Spectrum Type | Description | Splash Key | Deposition Date | Source | View |
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| Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(i-21:0/i-15:0) 10V, Positive-QTOF | splash10-0a6r-1189507400-5b52c453e3cf8966d6ac | 2019-02-23 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(i-21:0/i-15:0) 20V, Positive-QTOF | splash10-0a6s-4397205000-7f3f14f1475e080e8397 | 2019-02-23 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(i-21:0/i-15:0) 40V, Positive-QTOF | splash10-05o1-3379063000-7fd3e46aade1749079a6 | 2019-02-23 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(i-21:0/i-15:0) 10V, Negative-QTOF | splash10-004i-4039200200-cb9f2b3115a1c2e6ad82 | 2019-02-23 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(i-21:0/i-15:0) 20V, Negative-QTOF | splash10-004i-9014000000-38246271354a450aa78d | 2019-02-23 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(i-21:0/i-15:0) 40V, Negative-QTOF | splash10-004i-9000000000-a7ed90996760874027a9 | 2019-02-23 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(i-21:0/i-15:0) 10V, Positive-QTOF | splash10-004i-0000000900-b3d01b3daf9f2fb77903 | 2021-09-23 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(i-21:0/i-15:0) 20V, Positive-QTOF | splash10-004i-0000009900-29f19734b913ec00174d | 2021-09-23 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(i-21:0/i-15:0) 40V, Positive-QTOF | splash10-0fbi-0000922400-9170b2fec16740136522 | 2021-09-23 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(i-21:0/i-15:0) 10V, Positive-QTOF | splash10-052r-0000009500-062fd41b472d2b3aeb9d | 2021-09-23 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(i-21:0/i-15:0) 20V, Positive-QTOF | splash10-0a4i-0000007900-1d377e3c669921a51cd5 | 2021-09-23 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(i-21:0/i-15:0) 40V, Positive-QTOF | splash10-0bvi-0005509100-a37dcaab1dff75bcb657 | 2021-09-23 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(i-21:0/i-15:0) 10V, Negative-QTOF | splash10-0udi-0000000900-f85c523bc6724d7e0669 | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(i-21:0/i-15:0) 20V, Negative-QTOF | splash10-0h00-1139600500-8224b87fddf38565af1a | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(i-21:0/i-15:0) 40V, Negative-QTOF | splash10-004i-1149200100-90c655af6ff7ed843767 | 2021-09-25 | Wishart Lab | View Spectrum |
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