Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2021-08-27 20:04:30 UTC
Update Date2021-09-14 15:29:55 UTC
HMDB IDHMDB0242168
Secondary Accession NumbersNone
Metabolite Identification
Common Name6-Bromo-L-tryptophan
Description6-Bromo-L-tryptophan belongs to the class of organic compounds known as indolyl carboxylic acids and derivatives. Indolyl carboxylic acids and derivatives are compounds containing a carboxylic acid chain (of at least 2 carbon atoms) linked to an indole ring. Based on a literature review very few articles have been published on 6-Bromo-L-tryptophan.
Structure
Thumb
Synonyms
ValueSource
(S)-2-Amino-3-(6-bromo-1H-indol-3-yl)propanoic acidChEBI
(S)-2-Amino-3-(6-bromo-1H-indol-3-yl)propanoateGenerator
6-BromotryptophanHMDB
6-BR-TryptophanHMDB
Chemical FormulaC11H11BrN2O2
Average Molecular Weight283.121
Monoisotopic Molecular Weight282.000390253
IUPAC Name(2S)-2-amino-3-(6-bromo-1H-indol-3-yl)propanoic acid
Traditional NameL-6'-bromotryptophan
CAS Registry NumberNot Available
SMILES
[H][C@](N)(CC1=CNC2=C1C=CC(Br)=C2)C(O)=O
InChI Identifier
InChI=1S/C11H11BrN2O2/c12-7-1-2-8-6(3-9(13)11(15)16)5-14-10(8)4-7/h1-2,4-5,9,14H,3,13H2,(H,15,16)/t9-/m0/s1
InChI KeyOAORYCZPERQARS-VIFPVBQESA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as indolyl carboxylic acids and derivatives. Indolyl carboxylic acids and derivatives are compounds containing a carboxylic acid chain (of at least 2 carbon atoms) linked to an indole ring.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassIndoles and derivatives
Sub ClassIndolyl carboxylic acids and derivatives
Direct ParentIndolyl carboxylic acids and derivatives
Alternative Parents
Substituents
  • Indolyl carboxylic acid derivative
  • Alpha-amino acid
  • Alpha-amino acid or derivatives
  • L-alpha-amino acid
  • 3-alkylindole
  • Indole
  • Aralkylamine
  • Aryl bromide
  • Aryl halide
  • Benzenoid
  • Substituted pyrrole
  • Heteroaromatic compound
  • Pyrrole
  • Amino acid or derivatives
  • Amino acid
  • Carboxylic acid derivative
  • Carboxylic acid
  • Azacycle
  • Monocarboxylic acid or derivatives
  • Organopnictogen compound
  • Primary aliphatic amine
  • Primary amine
  • Amine
  • Organic oxygen compound
  • Organic nitrogen compound
  • Carbonyl group
  • Hydrocarbon derivative
  • Organic oxide
  • Organohalogen compound
  • Organobromide
  • Organonitrogen compound
  • Organooxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
DispositionNot Available
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP-0.42ALOGPS
logP-0.32ChemAxon
logS-3.1ALOGPS
pKa (Strongest Acidic)1.53ChemAxon
pKa (Strongest Basic)9.4ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area79.11 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity63.83 m³·mol⁻¹ChemAxon
Polarizability24.79 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+151.95230932474
DeepCCS[M-H]-149.55730932474
DeepCCS[M-2H]-182.71330932474
DeepCCS[M+Na]+157.95730932474

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
6-Bromo-L-tryptophan[H][C@](N)(CC1=CNC2=C1C=CC(Br)=C2)C(O)=O3475.9Standard polar33892256
6-Bromo-L-tryptophan[H][C@](N)(CC1=CNC2=C1C=CC(Br)=C2)C(O)=O2304.8Standard non polar33892256
6-Bromo-L-tryptophan[H][C@](N)(CC1=CNC2=C1C=CC(Br)=C2)C(O)=O2699.2Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
6-Bromo-L-tryptophan,2TMS,isomer #1C[Si](C)(C)N[C@@H](CC1=C[NH]C2=CC(Br)=CC=C12)C(=O)O[Si](C)(C)C2481.3Semi standard non polar33892256
6-Bromo-L-tryptophan,2TMS,isomer #1C[Si](C)(C)N[C@@H](CC1=C[NH]C2=CC(Br)=CC=C12)C(=O)O[Si](C)(C)C2333.5Standard non polar33892256
6-Bromo-L-tryptophan,2TMS,isomer #1C[Si](C)(C)N[C@@H](CC1=C[NH]C2=CC(Br)=CC=C12)C(=O)O[Si](C)(C)C2908.6Standard polar33892256
6-Bromo-L-tryptophan,2TMS,isomer #2C[Si](C)(C)OC(=O)[C@@H](N)CC1=CN([Si](C)(C)C)C2=CC(Br)=CC=C122470.8Semi standard non polar33892256
6-Bromo-L-tryptophan,2TMS,isomer #2C[Si](C)(C)OC(=O)[C@@H](N)CC1=CN([Si](C)(C)C)C2=CC(Br)=CC=C122313.5Standard non polar33892256
6-Bromo-L-tryptophan,2TMS,isomer #2C[Si](C)(C)OC(=O)[C@@H](N)CC1=CN([Si](C)(C)C)C2=CC(Br)=CC=C123032.7Standard polar33892256
6-Bromo-L-tryptophan,2TMS,isomer #3C[Si](C)(C)N([C@@H](CC1=C[NH]C2=CC(Br)=CC=C12)C(=O)O)[Si](C)(C)C2646.7Semi standard non polar33892256
6-Bromo-L-tryptophan,2TMS,isomer #3C[Si](C)(C)N([C@@H](CC1=C[NH]C2=CC(Br)=CC=C12)C(=O)O)[Si](C)(C)C2425.0Standard non polar33892256
6-Bromo-L-tryptophan,2TMS,isomer #3C[Si](C)(C)N([C@@H](CC1=C[NH]C2=CC(Br)=CC=C12)C(=O)O)[Si](C)(C)C3108.6Standard polar33892256
6-Bromo-L-tryptophan,2TMS,isomer #4C[Si](C)(C)N[C@@H](CC1=CN([Si](C)(C)C)C2=CC(Br)=CC=C12)C(=O)O2502.4Semi standard non polar33892256
6-Bromo-L-tryptophan,2TMS,isomer #4C[Si](C)(C)N[C@@H](CC1=CN([Si](C)(C)C)C2=CC(Br)=CC=C12)C(=O)O2335.5Standard non polar33892256
6-Bromo-L-tryptophan,2TMS,isomer #4C[Si](C)(C)N[C@@H](CC1=CN([Si](C)(C)C)C2=CC(Br)=CC=C12)C(=O)O3032.3Standard polar33892256
6-Bromo-L-tryptophan,3TMS,isomer #1C[Si](C)(C)OC(=O)[C@H](CC1=C[NH]C2=CC(Br)=CC=C12)N([Si](C)(C)C)[Si](C)(C)C2625.6Semi standard non polar33892256
6-Bromo-L-tryptophan,3TMS,isomer #1C[Si](C)(C)OC(=O)[C@H](CC1=C[NH]C2=CC(Br)=CC=C12)N([Si](C)(C)C)[Si](C)(C)C2477.8Standard non polar33892256
6-Bromo-L-tryptophan,3TMS,isomer #1C[Si](C)(C)OC(=O)[C@H](CC1=C[NH]C2=CC(Br)=CC=C12)N([Si](C)(C)C)[Si](C)(C)C2760.9Standard polar33892256
6-Bromo-L-tryptophan,3TMS,isomer #2C[Si](C)(C)N[C@@H](CC1=CN([Si](C)(C)C)C2=CC(Br)=CC=C12)C(=O)O[Si](C)(C)C2471.9Semi standard non polar33892256
6-Bromo-L-tryptophan,3TMS,isomer #2C[Si](C)(C)N[C@@H](CC1=CN([Si](C)(C)C)C2=CC(Br)=CC=C12)C(=O)O[Si](C)(C)C2377.1Standard non polar33892256
6-Bromo-L-tryptophan,3TMS,isomer #2C[Si](C)(C)N[C@@H](CC1=CN([Si](C)(C)C)C2=CC(Br)=CC=C12)C(=O)O[Si](C)(C)C2695.0Standard polar33892256
6-Bromo-L-tryptophan,3TMS,isomer #3C[Si](C)(C)N([C@@H](CC1=CN([Si](C)(C)C)C2=CC(Br)=CC=C12)C(=O)O)[Si](C)(C)C2658.2Semi standard non polar33892256
6-Bromo-L-tryptophan,3TMS,isomer #3C[Si](C)(C)N([C@@H](CC1=CN([Si](C)(C)C)C2=CC(Br)=CC=C12)C(=O)O)[Si](C)(C)C2482.8Standard non polar33892256
6-Bromo-L-tryptophan,3TMS,isomer #3C[Si](C)(C)N([C@@H](CC1=CN([Si](C)(C)C)C2=CC(Br)=CC=C12)C(=O)O)[Si](C)(C)C2836.2Standard polar33892256
6-Bromo-L-tryptophan,4TMS,isomer #1C[Si](C)(C)OC(=O)[C@H](CC1=CN([Si](C)(C)C)C2=CC(Br)=CC=C12)N([Si](C)(C)C)[Si](C)(C)C2673.7Semi standard non polar33892256
6-Bromo-L-tryptophan,4TMS,isomer #1C[Si](C)(C)OC(=O)[C@H](CC1=CN([Si](C)(C)C)C2=CC(Br)=CC=C12)N([Si](C)(C)C)[Si](C)(C)C2526.6Standard non polar33892256
6-Bromo-L-tryptophan,4TMS,isomer #1C[Si](C)(C)OC(=O)[C@H](CC1=CN([Si](C)(C)C)C2=CC(Br)=CC=C12)N([Si](C)(C)C)[Si](C)(C)C2612.6Standard polar33892256
6-Bromo-L-tryptophan,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)N[C@@H](CC1=C[NH]C2=CC(Br)=CC=C12)C(=O)O[Si](C)(C)C(C)(C)C2949.4Semi standard non polar33892256
6-Bromo-L-tryptophan,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)N[C@@H](CC1=C[NH]C2=CC(Br)=CC=C12)C(=O)O[Si](C)(C)C(C)(C)C2794.2Standard non polar33892256
6-Bromo-L-tryptophan,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)N[C@@H](CC1=C[NH]C2=CC(Br)=CC=C12)C(=O)O[Si](C)(C)C(C)(C)C3043.7Standard polar33892256
6-Bromo-L-tryptophan,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(=O)[C@@H](N)CC1=CN([Si](C)(C)C(C)(C)C)C2=CC(Br)=CC=C122943.0Semi standard non polar33892256
6-Bromo-L-tryptophan,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(=O)[C@@H](N)CC1=CN([Si](C)(C)C(C)(C)C)C2=CC(Br)=CC=C122717.6Standard non polar33892256
6-Bromo-L-tryptophan,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(=O)[C@@H](N)CC1=CN([Si](C)(C)C(C)(C)C)C2=CC(Br)=CC=C123113.2Standard polar33892256
6-Bromo-L-tryptophan,2TBDMS,isomer #3CC(C)(C)[Si](C)(C)N([C@@H](CC1=C[NH]C2=CC(Br)=CC=C12)C(=O)O)[Si](C)(C)C(C)(C)C3152.0Semi standard non polar33892256
6-Bromo-L-tryptophan,2TBDMS,isomer #3CC(C)(C)[Si](C)(C)N([C@@H](CC1=C[NH]C2=CC(Br)=CC=C12)C(=O)O)[Si](C)(C)C(C)(C)C2837.7Standard non polar33892256
6-Bromo-L-tryptophan,2TBDMS,isomer #3CC(C)(C)[Si](C)(C)N([C@@H](CC1=C[NH]C2=CC(Br)=CC=C12)C(=O)O)[Si](C)(C)C(C)(C)C3137.2Standard polar33892256
6-Bromo-L-tryptophan,2TBDMS,isomer #4CC(C)(C)[Si](C)(C)N[C@@H](CC1=CN([Si](C)(C)C(C)(C)C)C2=CC(Br)=CC=C12)C(=O)O2987.1Semi standard non polar33892256
6-Bromo-L-tryptophan,2TBDMS,isomer #4CC(C)(C)[Si](C)(C)N[C@@H](CC1=CN([Si](C)(C)C(C)(C)C)C2=CC(Br)=CC=C12)C(=O)O2754.2Standard non polar33892256
6-Bromo-L-tryptophan,2TBDMS,isomer #4CC(C)(C)[Si](C)(C)N[C@@H](CC1=CN([Si](C)(C)C(C)(C)C)C2=CC(Br)=CC=C12)C(=O)O3116.9Standard polar33892256
6-Bromo-L-tryptophan,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)[C@H](CC1=C[NH]C2=CC(Br)=CC=C12)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3315.8Semi standard non polar33892256
6-Bromo-L-tryptophan,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)[C@H](CC1=C[NH]C2=CC(Br)=CC=C12)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3084.8Standard non polar33892256
6-Bromo-L-tryptophan,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)[C@H](CC1=C[NH]C2=CC(Br)=CC=C12)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3011.0Standard polar33892256
6-Bromo-L-tryptophan,3TBDMS,isomer #2CC(C)(C)[Si](C)(C)N[C@@H](CC1=CN([Si](C)(C)C(C)(C)C)C2=CC(Br)=CC=C12)C(=O)O[Si](C)(C)C(C)(C)C3102.4Semi standard non polar33892256
6-Bromo-L-tryptophan,3TBDMS,isomer #2CC(C)(C)[Si](C)(C)N[C@@H](CC1=CN([Si](C)(C)C(C)(C)C)C2=CC(Br)=CC=C12)C(=O)O[Si](C)(C)C(C)(C)C2961.0Standard non polar33892256
6-Bromo-L-tryptophan,3TBDMS,isomer #2CC(C)(C)[Si](C)(C)N[C@@H](CC1=CN([Si](C)(C)C(C)(C)C)C2=CC(Br)=CC=C12)C(=O)O[Si](C)(C)C(C)(C)C2977.8Standard polar33892256
6-Bromo-L-tryptophan,3TBDMS,isomer #3CC(C)(C)[Si](C)(C)N([C@@H](CC1=CN([Si](C)(C)C(C)(C)C)C2=CC(Br)=CC=C12)C(=O)O)[Si](C)(C)C(C)(C)C3319.1Semi standard non polar33892256
6-Bromo-L-tryptophan,3TBDMS,isomer #3CC(C)(C)[Si](C)(C)N([C@@H](CC1=CN([Si](C)(C)C(C)(C)C)C2=CC(Br)=CC=C12)C(=O)O)[Si](C)(C)C(C)(C)C3004.9Standard non polar33892256
6-Bromo-L-tryptophan,3TBDMS,isomer #3CC(C)(C)[Si](C)(C)N([C@@H](CC1=CN([Si](C)(C)C(C)(C)C)C2=CC(Br)=CC=C12)C(=O)O)[Si](C)(C)C(C)(C)C3047.7Standard polar33892256
6-Bromo-L-tryptophan,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)[C@H](CC1=CN([Si](C)(C)C(C)(C)C)C2=CC(Br)=CC=C12)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3485.7Semi standard non polar33892256
6-Bromo-L-tryptophan,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)[C@H](CC1=CN([Si](C)(C)C(C)(C)C)C2=CC(Br)=CC=C12)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3196.6Standard non polar33892256
6-Bromo-L-tryptophan,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)[C@H](CC1=CN([Si](C)(C)C(C)(C)C)C2=CC(Br)=CC=C12)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2962.1Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 6-Bromo-L-tryptophan GC-MS (Non-derivatized) - 70eV, Positivesplash10-05bu-8190000000-ec90f8808efdddfad91b2021-09-23Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 6-Bromo-L-tryptophan GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-Bromo-L-tryptophan 10V, Positive-QTOFsplash10-015i-0090000000-92b764dff09b9a3883562021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-Bromo-L-tryptophan 20V, Positive-QTOFsplash10-014i-0090000000-506c5f5df9db3d9cf08f2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-Bromo-L-tryptophan 40V, Positive-QTOFsplash10-0avi-0290000000-afd645ea4a1d99bd99a72021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-Bromo-L-tryptophan 10V, Negative-QTOFsplash10-0006-0970000000-a80fdb9b6fa30f81f92e2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-Bromo-L-tryptophan 20V, Negative-QTOFsplash10-0006-4900000000-1c621a2777280ccf41592021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 6-Bromo-L-tryptophan 40V, Negative-QTOFsplash10-0006-7940000000-c6d1fb4ca487fa4f08062021-10-12Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID8032696
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound9856996
PDB IDNot Available
ChEBI ID47276
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Kong SW, Hernandez-Ferrer C: Assessment of coverage for endogenous metabolites and exogenous chemical compounds using an untargeted metabolomics platform. Pac Symp Biocomput. 2020;25:587-598. [PubMed:31797630 ]