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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-10 23:09:15 UTC
Update Date2021-09-26 22:54:59 UTC
HMDB IDHMDB0246115
Secondary Accession NumbersNone
Metabolite Identification
Common Name3(2H)-Isoflavene
Description3(2H)-Isoflavene belongs to the class of organic compounds known as isoflav-3-enes. These are flavonoids with a structure based on the 3-phenylchromene skeleton, with a double bond between the C3 and C4 carbon atoms of the chromene moiety. Based on a literature review a small amount of articles have been published on 3(2H)-Isoflavene. This compound has been identified in human blood as reported by (PMID: 31557052 ). 3(2h)-isoflavene is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically 3(2H)-Isoflavene is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC15H12O
Average Molecular Weight208.26
Monoisotopic Molecular Weight208.088815006
IUPAC Name3-phenyl-2H-chromene
Traditional Name3-phenyl-2H-chromene
CAS Registry NumberNot Available
SMILES
C1OC2=CC=CC=C2C=C1C1=CC=CC=C1
InChI Identifier
InChI=1S/C15H12O/c1-2-6-12(7-3-1)14-10-13-8-4-5-9-15(13)16-11-14/h1-10H,11H2
InChI KeyCNNBJLXLTIKXGJ-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as isoflav-3-enes. These are flavonoids with a structure based on the 3-phenylchromene skeleton, with a double bond between the C3 and C4 carbon atoms of the chromene moiety.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassIsoflavonoids
Sub ClassIsoflav-3-enes
Direct ParentIsoflav-3-enes
Alternative Parents
Substituents
  • Isoflav-3-ene skeleton
  • 1-benzopyran
  • Benzopyran
  • Alkyl aryl ether
  • Benzenoid
  • Monocyclic benzene moiety
  • Oxacycle
  • Organoheterocyclic compound
  • Ether
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Organooxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP3.95ALOGPS
logP3.69ChemAxon
logS-4.6ALOGPS
pKa (Strongest Basic)-4.9ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area9.23 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity65.77 m³·mol⁻¹ChemAxon
Polarizability23.62 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+144.46530932474
DeepCCS[M-H]-142.06930932474
DeepCCS[M-2H]-175.79930932474
DeepCCS[M+Na]+150.46930932474
AllCCS[M+H]+146.532859911
AllCCS[M+H-H2O]+142.032859911
AllCCS[M+NH4]+150.632859911
AllCCS[M+Na]+151.832859911
AllCCS[M-H]-150.232859911
AllCCS[M+Na-2H]-149.632859911
AllCCS[M+HCOO]-149.032859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
3(2H)-IsoflaveneC1OC2=CC=CC=C2C=C1C1=CC=CC=C12594.7Standard polar33892256
3(2H)-IsoflaveneC1OC2=CC=CC=C2C=C1C1=CC=CC=C11838.5Standard non polar33892256
3(2H)-IsoflaveneC1OC2=CC=CC=C2C=C1C1=CC=CC=C11918.3Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 3(2H)-Isoflavene GC-MS (Non-derivatized) - 70eV, Positivesplash10-0a7l-1920000000-ff240e294ae80db7f52f2021-09-24Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 3(2H)-Isoflavene GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3(2H)-Isoflavene 10V, Positive-QTOFsplash10-0a4i-0090000000-8612e9d1ae62a0584c692021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3(2H)-Isoflavene 20V, Positive-QTOFsplash10-0a4i-0090000000-7e8749e8329d1c87d56c2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3(2H)-Isoflavene 40V, Positive-QTOFsplash10-0a6r-2930000000-9e0366ada4ac662587312021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3(2H)-Isoflavene 10V, Negative-QTOFsplash10-0a4i-0090000000-6f338bc15297bc0a0a652021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3(2H)-Isoflavene 20V, Negative-QTOFsplash10-0a4i-0090000000-6f338bc15297bc0a0a652021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3(2H)-Isoflavene 40V, Negative-QTOFsplash10-0a4i-0190000000-5096da9e2e6a4231d8932021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID437821
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound500460
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]