| Record Information |
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| Version | 5.0 |
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| Status | Detected but not Quantified |
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| Creation Date | 2021-09-11 00:15:49 UTC |
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| Update Date | 2021-09-26 22:56:50 UTC |
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| HMDB ID | HMDB0247255 |
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| Secondary Accession Numbers | None |
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| Metabolite Identification |
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| Common Name | 7-Hydroxy granisetron |
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| Description | 7-Hydroxy granisetron belongs to the class of organic compounds known as indazole-3-carboxamides. These are aromatic compounds containing an indazole ring system that is substituted at the 3-position with a carboxamide group. Based on a literature review very few articles have been published on 7-Hydroxy granisetron. This compound has been identified in human blood as reported by (PMID: 31557052 ). 7-hydroxy granisetron is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically 7-Hydroxy granisetron is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources. |
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| Structure | CN1N=C(C(=O)NC2CC3CCCC(C2)N3C)C2=C1C(O)=CC=C2 InChI=1S/C18H24N4O2/c1-21-12-5-3-6-13(21)10-11(9-12)19-18(24)16-14-7-4-8-15(23)17(14)22(2)20-16/h4,7-8,11-13,23H,3,5-6,9-10H2,1-2H3,(H,19,24) |
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| Synonyms | | Value | Source |
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| 7-Hydroxy-1-methyl-N-{9-methyl-9-azabicyclo[3.3.1]nonan-3-yl}-1H-indazole-3-carboximidate | HMDB | | 7-Hydroxy-1-methyl-N-(endo-9-methyl-9-azabicyclo(3.3.1)non-3-yl)-1H-indazole-3-carboxamide | HMDB |
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| Chemical Formula | C18H24N4O2 |
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| Average Molecular Weight | 328.416 |
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| Monoisotopic Molecular Weight | 328.189926029 |
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| IUPAC Name | 7-hydroxy-1-methyl-N-{9-methyl-9-azabicyclo[3.3.1]nonan-3-yl}-1H-indazole-3-carboxamide |
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| Traditional Name | 7-hydroxy-1-methyl-N-{9-methyl-9-azabicyclo[3.3.1]nonan-3-yl}indazole-3-carboxamide |
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| CAS Registry Number | Not Available |
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| SMILES | CN1N=C(C(=O)NC2CC3CCCC(C2)N3C)C2=C1C(O)=CC=C2 |
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| InChI Identifier | InChI=1S/C18H24N4O2/c1-21-12-5-3-6-13(21)10-11(9-12)19-18(24)16-14-7-4-8-15(23)17(14)22(2)20-16/h4,7-8,11-13,23H,3,5-6,9-10H2,1-2H3,(H,19,24) |
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| InChI Key | AJEBHUMZPBDLQF-UHFFFAOYSA-N |
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| Chemical Taxonomy |
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| Description | Belongs to the class of organic compounds known as indazole-3-carboxamides. These are aromatic compounds containing an indazole ring system that is substituted at the 3-position with a carboxamide group. |
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| Kingdom | Organic compounds |
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| Super Class | Organoheterocyclic compounds |
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| Class | Benzopyrazoles |
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| Sub Class | Indazoles |
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| Direct Parent | Indazole-3-carboxamides |
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| Alternative Parents | |
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| Substituents | - Indazole-3-carboxamide
- 2-heteroaryl carboxamide
- Pyrazole-5-carboxamide
- Phenol
- 1-hydroxy-4-unsubstituted benzenoid
- 1-hydroxy-2-unsubstituted benzenoid
- Piperidine
- Benzenoid
- Azole
- Pyrazole
- Heteroaromatic compound
- Amino acid or derivatives
- Carboxamide group
- Tertiary aliphatic amine
- Tertiary amine
- Secondary carboxylic acid amide
- Carboxylic acid derivative
- Azacycle
- Amine
- Organooxygen compound
- Organonitrogen compound
- Hydrocarbon derivative
- Organic oxide
- Organic oxygen compound
- Organic nitrogen compound
- Aromatic heteropolycyclic compound
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| Molecular Framework | Aromatic heteropolycyclic compounds |
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| External Descriptors | Not Available |
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| Ontology |
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| Physiological effect | Not Available |
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| Disposition | |
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| Process | Not Available |
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| Role | Not Available |
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| Physical Properties |
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| State | Not Available |
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| Experimental Molecular Properties | | Property | Value | Reference |
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| Melting Point | Not Available | Not Available | | Boiling Point | Not Available | Not Available | | Water Solubility | Not Available | Not Available | | LogP | Not Available | Not Available |
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| Experimental Chromatographic Properties | Not Available |
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| Predicted Molecular Properties | |
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| Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Retention Times Underivatized| Chromatographic Method | Retention Time | Reference |
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| Predicted by Siyang on May 30, 2022 | 10.4868 minutes | 33406817 | | Predicted by Siyang using ReTip algorithm on June 8, 2022 | 3.74 minutes | 32390414 | | Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid | 1536.8 seconds | 40023050 | | Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid | 199.5 seconds | 40023050 | | Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid | 150.7 seconds | 40023050 | | Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid | 170.2 seconds | 40023050 | | RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 90.6 seconds | 40023050 | | Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid | 273.5 seconds | 40023050 | | BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid | 334.4 seconds | 40023050 | | HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate) | 517.8 seconds | 40023050 | | UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid | 796.0 seconds | 40023050 | | BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid | 358.9 seconds | 40023050 | | UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid | 1070.0 seconds | 40023050 | | SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 193.8 seconds | 40023050 | | RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 284.9 seconds | 40023050 | | MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate | 626.0 seconds | 40023050 | | KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA | 503.7 seconds | 40023050 | | Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water | 138.0 seconds | 40023050 |
Predicted Kovats Retention IndicesUnderivatizedDerivatized| Derivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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| 7-Hydroxy granisetron,2TMS,isomer #1 | CN1C2CCCC1CC(N(C(=O)C1=NN(C)C3=C(O[Si](C)(C)C)C=CC=C13)[Si](C)(C)C)C2 | 2925.2 | Semi standard non polar | 33892256 | | 7-Hydroxy granisetron,2TMS,isomer #1 | CN1C2CCCC1CC(N(C(=O)C1=NN(C)C3=C(O[Si](C)(C)C)C=CC=C13)[Si](C)(C)C)C2 | 2878.8 | Standard non polar | 33892256 | | 7-Hydroxy granisetron,2TMS,isomer #1 | CN1C2CCCC1CC(N(C(=O)C1=NN(C)C3=C(O[Si](C)(C)C)C=CC=C13)[Si](C)(C)C)C2 | 3802.5 | Standard polar | 33892256 | | 7-Hydroxy granisetron,2TBDMS,isomer #1 | CN1C2CCCC1CC(N(C(=O)C1=NN(C)C3=C(O[Si](C)(C)C(C)(C)C)C=CC=C13)[Si](C)(C)C(C)(C)C)C2 | 3310.6 | Semi standard non polar | 33892256 | | 7-Hydroxy granisetron,2TBDMS,isomer #1 | CN1C2CCCC1CC(N(C(=O)C1=NN(C)C3=C(O[Si](C)(C)C(C)(C)C)C=CC=C13)[Si](C)(C)C(C)(C)C)C2 | 3311.1 | Standard non polar | 33892256 | | 7-Hydroxy granisetron,2TBDMS,isomer #1 | CN1C2CCCC1CC(N(C(=O)C1=NN(C)C3=C(O[Si](C)(C)C(C)(C)C)C=CC=C13)[Si](C)(C)C(C)(C)C)C2 | 3911.9 | Standard polar | 33892256 |
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| GC-MS Spectra| Spectrum Type | Description | Splash Key | Deposition Date | Source | View |
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| Predicted GC-MS | Predicted GC-MS Spectrum - 7-Hydroxy granisetron GC-MS (Non-derivatized) - 70eV, Positive | splash10-03ka-4923000000-40e342702ea5e30f6d92 | 2021-09-23 | Wishart Lab | View Spectrum | | Predicted GC-MS | Predicted GC-MS Spectrum - 7-Hydroxy granisetron GC-MS (Non-derivatized) - 70eV, Positive | Not Available | 2021-10-12 | Wishart Lab | View Spectrum | | Predicted GC-MS | Predicted GC-MS Spectrum - 7-Hydroxy granisetron GC-MS (TMS_1_1) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | | Predicted GC-MS | Predicted GC-MS Spectrum - 7-Hydroxy granisetron GC-MS (TMS_1_2) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | | Predicted GC-MS | Predicted GC-MS Spectrum - 7-Hydroxy granisetron GC-MS (TBDMS_1_1) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | | Predicted GC-MS | Predicted GC-MS Spectrum - 7-Hydroxy granisetron GC-MS (TBDMS_1_2) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum |
MS/MS Spectra| Spectrum Type | Description | Splash Key | Deposition Date | Source | View |
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| Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 7-Hydroxy granisetron 10V, Positive-QTOF | splash10-004i-0009000000-764f98249dcab2b4ea51 | 2021-10-12 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 7-Hydroxy granisetron 20V, Positive-QTOF | splash10-004i-0009000000-f852830f17610df19ea7 | 2021-10-12 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 7-Hydroxy granisetron 40V, Positive-QTOF | splash10-00di-1911000000-412228c9494ea5ac1015 | 2021-10-12 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 7-Hydroxy granisetron 10V, Negative-QTOF | splash10-004i-0009000000-e9f7bb9e953058a9c7e6 | 2021-10-12 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 7-Hydroxy granisetron 20V, Negative-QTOF | splash10-004i-1119000000-f53512af11e8c6ca0e0b | 2021-10-12 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 7-Hydroxy granisetron 40V, Negative-QTOF | splash10-00l7-5911000000-1cd6a860621893d978ec | 2021-10-12 | Wishart Lab | View Spectrum |
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