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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 01:55:04 UTC
Update Date2021-09-26 22:58:50 UTC
HMDB IDHMDB0248516
Secondary Accession NumbersNone
Metabolite Identification
Common NameAplaviroc
DescriptionAplaviroc belongs to the class of organic compounds known as n-benzylpiperidines. These are heterocyclic Compounds containing a piperidine ring conjugated to a benzyl group through one nitrogen ring atom. Based on a literature review a significant number of articles have been published on Aplaviroc. This compound has been identified in human blood as reported by (PMID: 31557052 ). Aplaviroc is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Aplaviroc is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC33H43N3O6
Average Molecular Weight577.722
Monoisotopic Molecular Weight577.315186117
IUPAC Name4-[4-({1-butyl-3-[cyclohexyl(hydroxy)methyl]-2,5-dioxo-1,4,9-triazaspiro[5.5]undecan-9-yl}methyl)phenoxy]benzoic acid
Traditional Name4-[4-({1-butyl-3-[cyclohexyl(hydroxy)methyl]-2,5-dioxo-1,4,9-triazaspiro[5.5]undecan-9-yl}methyl)phenoxy]benzoic acid
CAS Registry NumberNot Available
SMILES
CCCCN1C(=O)C(NC(=O)C11CCN(CC2=CC=C(OC3=CC=C(C=C3)C(O)=O)C=C2)CC1)C(O)C1CCCCC1
InChI Identifier
InChI=1S/C33H43N3O6/c1-2-3-19-36-30(38)28(29(37)24-7-5-4-6-8-24)34-32(41)33(36)17-20-35(21-18-33)22-23-9-13-26(14-10-23)42-27-15-11-25(12-16-27)31(39)40/h9-16,24,28-29,37H,2-8,17-22H2,1H3,(H,34,41)(H,39,40)
InChI KeyGWNOTCOIYUNTQP-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as n-benzylpiperidines. These are heterocyclic Compounds containing a piperidine ring conjugated to a benzyl group through one nitrogen ring atom.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassPiperidines
Sub ClassBenzylpiperidines
Direct ParentN-benzylpiperidines
Alternative Parents
Substituents
  • Diphenylether
  • N-benzylpiperidine
  • Diaryl ether
  • Alpha-amino acid or derivatives
  • Azaspirodecane
  • Benzoic acid or derivatives
  • Benzoic acid
  • Phenoxy compound
  • Benzoyl
  • Benzylamine
  • 2,5-dioxopiperazine
  • Dioxopiperazine
  • Phenol ether
  • Phenylmethylamine
  • Aralkylamine
  • N-alkylpiperazine
  • Monocyclic benzene moiety
  • Piperazine
  • 1,4-diazinane
  • Benzenoid
  • Tertiary carboxylic acid amide
  • Tertiary amine
  • Secondary carboxylic acid amide
  • Amino acid or derivatives
  • Secondary alcohol
  • Amino acid
  • Carboxamide group
  • Tertiary aliphatic amine
  • Lactam
  • Carboxylic acid derivative
  • Azacycle
  • Carboxylic acid
  • Ether
  • Organic oxygen compound
  • Carbonyl group
  • Hydrocarbon derivative
  • Alcohol
  • Amine
  • Organooxygen compound
  • Organic oxide
  • Organic nitrogen compound
  • Organonitrogen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP3.77ALOGPS
logP1.48ChemAxon
logS-4.4ALOGPS
pKa (Strongest Acidic)4.3ChemAxon
pKa (Strongest Basic)7.94ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area119.41 ŲChemAxon
Rotatable Bond Count10ChemAxon
Refractivity159.43 m³·mol⁻¹ChemAxon
Polarizability64.63 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M-2H]-262.79230932474
DeepCCS[M+Na]+237.88530932474
AllCCS[M+H]+232.532859911
AllCCS[M+H-H2O]+231.632859911
AllCCS[M+NH4]+233.332859911
AllCCS[M+Na]+233.532859911
AllCCS[M-H]-210.032859911
AllCCS[M+Na-2H]-212.632859911
AllCCS[M+HCOO]-215.732859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
AplavirocCCCCN1C(=O)C(NC(=O)C11CCN(CC2=CC=C(OC3=CC=C(C=C3)C(O)=O)C=C2)CC1)C(O)C1CCCCC15076.6Standard polar33892256
AplavirocCCCCN1C(=O)C(NC(=O)C11CCN(CC2=CC=C(OC3=CC=C(C=C3)C(O)=O)C=C2)CC1)C(O)C1CCCCC14119.8Standard non polar33892256
AplavirocCCCCN1C(=O)C(NC(=O)C11CCN(CC2=CC=C(OC3=CC=C(C=C3)C(O)=O)C=C2)CC1)C(O)C1CCCCC15122.7Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Aplaviroc,3TMS,isomer #1CCCCN1C(=O)C(C(O[Si](C)(C)C)C2CCCCC2)N([Si](C)(C)C)C(=O)C12CCN(CC1=CC=C(OC3=CC=C(C(=O)O[Si](C)(C)C)C=C3)C=C1)CC24495.2Semi standard non polar33892256
Aplaviroc,3TMS,isomer #1CCCCN1C(=O)C(C(O[Si](C)(C)C)C2CCCCC2)N([Si](C)(C)C)C(=O)C12CCN(CC1=CC=C(OC3=CC=C(C(=O)O[Si](C)(C)C)C=C3)C=C1)CC23886.8Standard non polar33892256
Aplaviroc,3TMS,isomer #1CCCCN1C(=O)C(C(O[Si](C)(C)C)C2CCCCC2)N([Si](C)(C)C)C(=O)C12CCN(CC1=CC=C(OC3=CC=C(C(=O)O[Si](C)(C)C)C=C3)C=C1)CC25507.0Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Aplaviroc GC-MS (TMS_1_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Aplaviroc GC-MS (TMS_1_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Aplaviroc GC-MS (TMS_1_3) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Aplaviroc GC-MS (TMS_2_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Aplaviroc GC-MS (TMS_2_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Aplaviroc GC-MS (TMS_2_3) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Aplaviroc GC-MS (TBDMS_1_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Aplaviroc GC-MS (TBDMS_1_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Aplaviroc GC-MS (TBDMS_1_3) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Aplaviroc GC-MS (TBDMS_2_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Aplaviroc GC-MS (TBDMS_2_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Aplaviroc GC-MS (TBDMS_2_3) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Aplaviroc 10V, Positive-QTOFsplash10-004i-0000090000-9f1b29ac22979ea5fcdf2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Aplaviroc 20V, Positive-QTOFsplash10-03fr-0000590000-56ce88ad7075ba2ba4d42021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Aplaviroc 40V, Positive-QTOFsplash10-00c1-9255570000-c535a5370dcc58c9ee262021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Aplaviroc 10V, Negative-QTOFsplash10-03fr-0000090000-e1739a7d8e14285e81292021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Aplaviroc 20V, Negative-QTOFsplash10-0229-1000890000-1cd09084df74a444cc782021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Aplaviroc 40V, Negative-QTOFsplash10-0a4l-7911340000-b2038c880fb4ce8c82872021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID8113747
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkAplaviroc
METLIN IDNot Available
PubChem Compound9938121
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]