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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 06:47:03 UTC
Update Date2021-09-26 23:00:59 UTC
HMDB IDHMDB0249871
Secondary Accession NumbersNone
Metabolite Identification
Common NameN,15-Didehydro-11,15-dideoxo-1-deoxy-1,15-epoxy-11-hydroxy-4-O-methyl-3-(4-((2,4,6-trimethylphenyl)methyl)-1-piperazinyl)rifamycin 8-(2,2-dimethylpropanoate)
Description21-(acetyloxy)-17,19,28-trihydroxy-6,23-dimethoxy-2,12,16,18,20,22,27-heptamethyl-7-{4-[(2,4,6-trimethylphenyl)methyl]piperazin-1-yl}-10,26,30-trioxa-31-azapentacyclo[25.2.1.1⁸,¹¹.0⁴,⁹.0⁵,²⁹]hentriaconta-1(29),2,4(9),5,7,11(31),12,14,24-nonaen-3-yl 2,2-dimethylpropanoate belongs to the class of organic compounds known as naphthofurans. Naphthofurans are compounds containing a furan ring fused to a naphthalene moiety. Furan is a 5 membered- ring aromatic ring with four carbon and one oxygen atoms. Naphthalene is a polycyclic aromatic hydrocarbon made up of two fused benzene rings. Based on a literature review very few articles have been published on 21-(acetyloxy)-17,19,28-trihydroxy-6,23-dimethoxy-2,12,16,18,20,22,27-heptamethyl-7-{4-[(2,4,6-trimethylphenyl)methyl]piperazin-1-yl}-10,26,30-trioxa-31-azapentacyclo[25.2.1.1⁸,¹¹.0⁴,⁹.0⁵,²⁹]hentriaconta-1(29),2,4(9),5,7,11(31),12,14,24-nonaen-3-yl 2,2-dimethylpropanoate. This compound has been identified in human blood as reported by (PMID: 31557052 ). N,15-didehydro-11,15-dideoxo-1-deoxy-1,15-epoxy-11-hydroxy-4-o-methyl-3-(4-((2,4,6-trimethylphenyl)methyl)-1-piperazinyl)rifamycin 8-(2,2-dimethylpropanoate) is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically N,15-Didehydro-11,15-dideoxo-1-deoxy-1,15-epoxy-11-hydroxy-4-O-methyl-3-(4-((2,4,6-trimethylphenyl)methyl)-1-piperazinyl)rifamycin 8-(2,2-dimethylpropanoate) is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
21-(Acetyloxy)-17,19,28-trihydroxy-6,23-dimethoxy-2,12,16,18,20,22,27-heptamethyl-7-{4-[(2,4,6-trimethylphenyl)methyl]piperazin-1-yl}-10,26,30-trioxa-31-azapentacyclo[25.2.1.1,.0,.0,]hentriaconta-1(29),2,4(9),5,7,11(31),12,14,24-nonaen-3-yl 2,2-dimethylpropanoic acidGenerator
N,15-Didehydro-11,15-dideoxo-1-deoxy-1,15-epoxy-11-hydroxy-4-O-methyl-3-(4-((2,4,6-trimethylphenyl)methyl)-1-piperazinyl)rifamycin 8-(2,2-dimethylpropanoic acid)Generator
Chemical FormulaC57H77N3O12
Average Molecular Weight996.252
Monoisotopic Molecular Weight995.550724931
IUPAC Name21-(acetyloxy)-17,19,28-trihydroxy-6,23-dimethoxy-2,12,16,18,20,22,27-heptamethyl-7-{4-[(2,4,6-trimethylphenyl)methyl]piperazin-1-yl}-10,26,30-trioxa-31-azapentacyclo[25.2.1.1^{8,11}.0^{4,9}.0^{5,29}]hentriaconta-1(29),2,4,6,8,11(31),12,14,24-nonaen-3-yl 2,2-dimethylpropanoate
Traditional Name21-(acetyloxy)-17,19,28-trihydroxy-6,23-dimethoxy-2,12,16,18,20,22,27-heptamethyl-7-{4-[(2,4,6-trimethylphenyl)methyl]piperazin-1-yl}-10,26,30-trioxa-31-azapentacyclo[25.2.1.1^{8,11}.0^{4,9}.0^{5,29}]hentriaconta-1(29),2,4,6,8,11(31),12,14,24-nonaen-3-yl 2,2-dimethylpropanoate
CAS Registry NumberNot Available
SMILES
COC1C=COC2(C)OC3=C(C2O)C2=C(C4=C(N=C(O4)C(C)=CC=CC(C)C(O)C(C)C(O)C(C)C(OC(C)=O)C1C)C(N1CCN(CC4=C(C)C=C(C)C=C4C)CC1)=C2OC)C(OC(=O)C(C)(C)C)=C3C
InChI Identifier
InChI=1S/C57H77N3O12/c1-29-26-32(4)39(33(5)27-29)28-59-21-23-60(24-22-59)45-44-51-42-41(52(45)67-16)43-50(37(9)49(42)71-55(65)56(11,12)13)72-57(14,53(43)64)68-25-20-40(66-15)34(6)48(69-38(10)61)36(8)47(63)35(7)46(62)30(2)18-17-19-31(3)54(58-44)70-51/h17-20,25-27,30,34-36,40,46-48,53,62-64H,21-24,28H2,1-16H3
InChI KeyCGBMSJVNJLFYAU-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as naphthofurans. Naphthofurans are compounds containing a furan ring fused to a naphthalene moiety. Furan is a 5 membered- ring aromatic ring with four carbon and one oxygen atoms. Naphthalene is a polycyclic aromatic hydrocarbon made up of two fused benzene rings.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassNaphthofurans
Sub ClassNot Available
Direct ParentNaphthofurans
Alternative Parents
Substituents
  • Naphthofuran
  • N-arylpiperazine
  • Naphthalene
  • Coumaran
  • Methoxyaniline
  • Benzoxazole
  • Dialkylarylamine
  • Tertiary aliphatic/aromatic amine
  • Phenylmethylamine
  • Benzylamine
  • Anisole
  • Ketal
  • Aralkylamine
  • N-alkylpiperazine
  • Alkyl aryl ether
  • Benzenoid
  • Piperazine
  • Dicarboxylic acid or derivatives
  • 1,4-diazinane
  • Monocyclic benzene moiety
  • Heteroaromatic compound
  • Oxazole
  • Azole
  • Tertiary aliphatic amine
  • Tertiary amine
  • Secondary alcohol
  • Carboxylic acid ester
  • Amino acid or derivatives
  • Oxacycle
  • Azacycle
  • Polyol
  • Ether
  • Dialkyl ether
  • Carboxylic acid derivative
  • Acetal
  • Organic nitrogen compound
  • Organic oxygen compound
  • Organopnictogen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Organonitrogen compound
  • Carbonyl group
  • Amine
  • Alcohol
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP6.79ALOGPS
logP9.48ChemAxon
logS-4.7ALOGPS
pKa (Strongest Acidic)12.37ChemAxon
pKa (Strongest Basic)8.2ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count12ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area182.72 ŲChemAxon
Rotatable Bond Count10ChemAxon
Refractivity280.13 m³·mol⁻¹ChemAxon
Polarizability110.59 ųChemAxon
Number of Rings7ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+318.94430932474
DeepCCS[M-H]-317.22130932474
DeepCCS[M-2H]-351.25530932474
DeepCCS[M+Na]+325.27330932474

Predicted Kovats Retention Indices

Not Available
Spectra
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound188912
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]