Hmdb loader
Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 07:59:02 UTC
Update Date2021-09-26 23:02:32 UTC
HMDB IDHMDB0250839
Secondary Accession NumbersNone
Metabolite Identification
Common NameDammarane
Description2,6,6,10,11-pentamethyl-14-(6-methylheptan-2-yl)tetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecane belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units. 2,6,6,10,11-pentamethyl-14-(6-methylheptan-2-yl)tetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecane is possibly neutral. This compound has been identified in human blood as reported by (PMID: 31557052 ). Dammarane is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Dammarane is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC30H54
Average Molecular Weight414.762
Monoisotopic Molecular Weight414.422551739
IUPAC Name2,6,6,10,11-pentamethyl-14-(6-methylheptan-2-yl)tetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecane
Traditional Name2,6,6,10,11-pentamethyl-14-(6-methylheptan-2-yl)tetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecane
CAS Registry NumberNot Available
SMILES
CC(C)CCCC(C)C1CCC2(C)C1CCC1C3(C)CCCC(C)(C)C3CCC21C
InChI Identifier
InChI=1S/C30H54/c1-21(2)11-9-12-22(3)23-15-19-29(7)24(23)13-14-26-28(6)18-10-17-27(4,5)25(28)16-20-30(26,29)8/h21-26H,9-20H2,1-8H3
InChI KeyOORMXZNMRWBSTK-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassTriterpenoids
Direct ParentTriterpenoids
Alternative Parents
Substituents
  • Triterpenoid
  • Steroid
  • Polycyclic hydrocarbon
  • Saturated hydrocarbon
  • Hydrocarbon
  • Aliphatic homopolycyclic compound
Molecular FrameworkAliphatic homopolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP7.95ALOGPS
logP9.79ChemAxon
logS-7.6ALOGPS
Physiological Charge0ChemAxon
Hydrogen Acceptor Count0ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area0 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity131.6 m³·mol⁻¹ChemAxon
Polarizability55.3 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M-2H]-245.37730932474
DeepCCS[M+Na]+220.72930932474
AllCCS[M+H]+213.832859911
AllCCS[M+H-H2O]+212.032859911
AllCCS[M+NH4]+215.532859911
AllCCS[M+Na]+215.932859911
AllCCS[M-H]-209.432859911
AllCCS[M+Na-2H]-211.732859911
AllCCS[M+HCOO]-214.532859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
DammaraneCC(C)CCCC(C)C1CCC2(C)C1CCC1C3(C)CCCC(C)(C)C3CCC21C2924.9Standard polar33892256
DammaraneCC(C)CCCC(C)C1CCC2(C)C1CCC1C3(C)CCCC(C)(C)C3CCC21C3023.6Standard non polar33892256
DammaraneCC(C)CCCC(C)C1CCC2(C)C1CCC1C3(C)CCCC(C)(C)C3CCC21C3059.3Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Dammarane GC-MS (Non-derivatized) - 70eV, Positivesplash10-000b-1229000000-0eb5605c1442351120f32021-09-23Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Dammarane GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dammarane 10V, Positive-QTOFsplash10-014i-0012900000-354b7fe1cf98bb493a462021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dammarane 20V, Positive-QTOFsplash10-0w4r-6890000000-0d0efafe2d9d092c04732021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dammarane 40V, Positive-QTOFsplash10-0btl-9540000000-b3a8151efcd2c96fb4e92021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dammarane 10V, Negative-QTOFsplash10-03di-0000900000-b0c20340afb68172e9f12021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dammarane 20V, Negative-QTOFsplash10-03di-0000900000-b0c20340afb68172e9f12021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dammarane 40V, Negative-QTOFsplash10-03di-0007900000-52847e6a27c8442dd8802021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound12309013
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]