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Record Information

Version

5.0

Status

Detected but not Quantified

Creation Date

2021-09-11 13:25:21 UTC

Update Date

2022-11-23 22:29:16 UTC

HMDB ID

HMDB0254229

Secondary Accession Numbers

None

Metabolite Identification

Common Name

Luzindole

Description

Luzindole, also known as N 0774, belongs to the class of organic compounds known as 3-alkylindoles. 3-alkylindoles are compounds containing an indole moiety that carries an alkyl chain at the 3-position. Based on a literature review a significant number of articles have been published on Luzindole. This compound has been identified in human blood as reported by (PMID: 31557052 ). Luzindole is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Luzindole is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI

HMDB0254229
     RDKit          3D
luzindole
 42 44  0  0  0  0  0  0  0  0999 V2000
    4.0790    3.1540    0.8651 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8717    2.3134    0.6102 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1907    2.5998   -0.3702 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5234    1.2320    1.4594 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.3504    0.4467    1.1678 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4879   -0.2298   -0.1465 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3644   -1.0720   -0.5576 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8094   -0.7519   -1.1600 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3300    0.5376   -1.6125 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9547    1.3656   -0.5607 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4188    2.5432   -0.1004 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0575    3.2837    0.9015 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2425    2.8578    1.4588 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7912    1.6913    1.0157 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1519    0.9757    0.0316 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5375   -1.9008   -1.3170 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8665   -2.9501   -0.8337 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1718   -4.2956   -0.7575 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2677   -5.1641   -0.1909 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9396   -4.6512    0.2929 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2319   -3.3099    0.2112 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3244   -2.4586   -0.3541 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8398    3.0100    0.0498 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5724    2.9475    1.8088 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7857    4.2213    0.8315 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1405    1.0223    2.3019 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4180    1.0125    1.2949 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3487   -0.3379    2.0144 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4445   -0.8465   -0.0949 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7245    0.5167   -0.9316 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5421    1.1023   -2.1647 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1365    0.3717   -2.3841 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5016    2.9006   -0.5170 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5755    4.2188    1.2257 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7063    3.4673    2.2385 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7302    1.3165    1.4300 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5982    0.0526   -0.3114 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4874   -1.9844   -1.7487 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1122   -4.7002   -1.1330 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4345   -6.2330   -0.0942 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6356   -5.3363    0.7326 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1510   -2.9387    0.5821 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  2  0
  2  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  2  0
  8  9  1  0
  9 10  1  0
 10 11  2  0
 11 12  1  0
 12 13  2  0
 13 14  1  0
 14 15  2  0
  8 16  1  0
 16 17  1  0
 17 18  2  0
 18 19  1  0
 19 20  2  0
 20 21  1  0
 21 22  2  0
 22  7  1  0
 15 10  1  0
 22 17  1  0
  1 23  1  0
  1 24  1  0
  1 25  1  0
  4 26  1  0
  5 27  1  0
  5 28  1  0
  6 29  1  0
  6 30  1  0
  9 31  1  0
  9 32  1  0
 11 33  1  0
 12 34  1  0
 13 35  1  0
 14 36  1  0
 15 37  1  0
 16 38  1  0
 18 39  1  0
 19 40  1  0
 20 41  1  0
 21 42  1  0
M  END


  Mrv1652309112115252D          

 22 24  0  0  0  0            999 V2000
    2.4820    0.5756    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1964    0.1631    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1964   -0.6619    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.9109    0.5756    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.6254    0.1631    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3399    0.5756    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0543    0.1631    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8080    0.4987    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.3600   -0.1144    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    6.9475   -0.8289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2025   -1.6135    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6504   -2.2266    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8435   -2.0551    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5885   -1.2704    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1406   -0.6573    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9795    1.3057    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.7642    1.5606    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9357    2.3676    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.7203    2.6225    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.3334    2.0705    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.1619    1.2635    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.3773    1.0086    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  2  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  2  0  0  0  0
 11 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 10 15  1  0  0  0  0
  7 15  1  0  0  0  0
  8 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  2  0  0  0  0
 18 19  1  0  0  0  0
 19 20  2  0  0  0  0
 20 21  1  0  0  0  0
 21 22  2  0  0  0  0
 17 22  1  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0254229

> <DATABASE_NAME>
hmdb

> <SMILES>
CC(=O)NCCC1=C(CC2=CC=CC=C2)NC2=CC=CC=C12

> <INCHI_IDENTIFIER>
InChI=1S/C19H20N2O/c1-14(22)20-12-11-17-16-9-5-6-10-18(16)21-19(17)13-15-7-3-2-4-8-15/h2-10,21H,11-13H2,1H3,(H,20,22)

> <INCHI_KEY>
WVVXBPKOIZGVNS-UHFFFAOYSA-N

> <FORMULA>
C19H20N2O

> <MOLECULAR_WEIGHT>
292.382

> <EXACT_MASS>
292.157563272

> <JCHEM_ACCEPTOR_COUNT>
1

> <JCHEM_ATOM_COUNT>
42

> <JCHEM_AVERAGE_POLARIZABILITY>
33.58198070561289

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
N-[2-(2-benzyl-1H-indol-3-yl)ethyl]acetamide

> <ALOGPS_LOGP>
3.59

> <JCHEM_LOGP>
3.1611717436666664

> <ALOGPS_LOGS>
-5.33

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
16.521980955112532

> <JCHEM_PKA_STRONGEST_ACIDIC>
15.676700438781097

> <JCHEM_PKA_STRONGEST_BASIC>
-1.5688609259468773

> <JCHEM_POLAR_SURFACE_AREA>
44.89

> <JCHEM_REFRACTIVITY>
89.58540000000002

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.35e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
luzindole

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0254229
     RDKit          3D
luzindole
 42 44  0  0  0  0  0  0  0  0999 V2000
    4.0790    3.1540    0.8651 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8717    2.3134    0.6102 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1907    2.5998   -0.3702 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5234    1.2320    1.4594 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.3504    0.4467    1.1678 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4879   -0.2298   -0.1465 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3644   -1.0720   -0.5576 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8094   -0.7519   -1.1600 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3300    0.5376   -1.6125 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9547    1.3656   -0.5607 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4188    2.5432   -0.1004 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0575    3.2837    0.9015 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2425    2.8578    1.4588 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7912    1.6913    1.0157 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1519    0.9757    0.0316 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5375   -1.9008   -1.3170 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8665   -2.9501   -0.8337 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1718   -4.2956   -0.7575 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2677   -5.1641   -0.1909 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9396   -4.6512    0.2929 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2319   -3.3099    0.2112 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3244   -2.4586   -0.3541 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8398    3.0100    0.0498 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5724    2.9475    1.8088 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7857    4.2213    0.8315 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1405    1.0223    2.3019 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4180    1.0125    1.2949 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3487   -0.3379    2.0144 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4445   -0.8465   -0.0949 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7245    0.5167   -0.9316 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5421    1.1023   -2.1647 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1365    0.3717   -2.3841 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5016    2.9006   -0.5170 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5755    4.2188    1.2257 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7063    3.4673    2.2385 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7302    1.3165    1.4300 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5982    0.0526   -0.3114 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4874   -1.9844   -1.7487 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1122   -4.7002   -1.1330 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4345   -6.2330   -0.0942 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6356   -5.3363    0.7326 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1510   -2.9387    0.5821 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  2  0
  2  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  2  0
  8  9  1  0
  9 10  1  0
 10 11  2  0
 11 12  1  0
 12 13  2  0
 13 14  1  0
 14 15  2  0
  8 16  1  0
 16 17  1  0
 17 18  2  0
 18 19  1  0
 19 20  2  0
 20 21  1  0
 21 22  2  0
 22  7  1  0
 15 10  1  0
 22 17  1  0
  1 23  1  0
  1 24  1  0
  1 25  1  0
  4 26  1  0
  5 27  1  0
  5 28  1  0
  6 29  1  0
  6 30  1  0
  9 31  1  0
  9 32  1  0
 11 33  1  0
 12 34  1  0
 13 35  1  0
 14 36  1  0
 15 37  1  0
 16 38  1  0
 18 39  1  0
 19 40  1  0
 20 41  1  0
 21 42  1  0
M  END

HEADER    PROTEIN                                 11-SEP-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   11-SEP-21         0                                  
HETATM    1  C   UNK     0       4.633   1.075   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       5.967   0.305   0.000  0.00  0.00           C+0
HETATM    3  O   UNK     0       5.967  -1.235   0.000  0.00  0.00           O+0
HETATM    4  N   UNK     0       7.300   1.075   0.000  0.00  0.00           N+0
HETATM    5  C   UNK     0       8.634   0.305   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       9.968   1.075   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      11.301   0.305   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      12.708   0.931   0.000  0.00  0.00           C+0
HETATM    9  N   UNK     0      13.739  -0.214   0.000  0.00  0.00           N+0
HETATM   10  C   UNK     0      12.969  -1.547   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      13.445  -3.012   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      12.414  -4.156   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      10.908  -3.836   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      10.432  -2.371   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      11.462  -1.227   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      13.028   2.437   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      14.493   2.913   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      14.813   4.419   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      16.278   4.895   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      17.422   3.865   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      17.102   2.359   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      15.638   1.883   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3    4                                                  
CONECT    3    2                                                            
CONECT    4    2    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8   15                                                  
CONECT    8    7    9   16                                                  
CONECT    9    8   10                                                       
CONECT   10    9   11   15                                                  
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   10    7                                                  
CONECT   16    8   17                                                       
CONECT   17   16   18   22                                                  
CONECT   18   17   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   21                                                       
CONECT   21   20   22                                                       
CONECT   22   21   17                                                       
MASTER        0    0    0    0    0    0    0    0   22    0   48    0
END

COMPND    HMDB0254229
HETATM    1  C1  UNL     1       4.079   3.154   0.865  1.00  0.00           C  
HETATM    2  C2  UNL     1       2.872   2.313   0.610  1.00  0.00           C  
HETATM    3  O1  UNL     1       2.191   2.600  -0.370  1.00  0.00           O  
HETATM    4  N1  UNL     1       2.523   1.232   1.459  1.00  0.00           N  
HETATM    5  C3  UNL     1       1.350   0.447   1.168  1.00  0.00           C  
HETATM    6  C4  UNL     1       1.488  -0.230  -0.147  1.00  0.00           C  
HETATM    7  C5  UNL     1       0.364  -1.072  -0.558  1.00  0.00           C  
HETATM    8  C6  UNL     1      -0.809  -0.752  -1.160  1.00  0.00           C  
HETATM    9  C7  UNL     1      -1.330   0.538  -1.613  1.00  0.00           C  
HETATM   10  C8  UNL     1      -1.955   1.366  -0.561  1.00  0.00           C  
HETATM   11  C9  UNL     1      -1.419   2.543  -0.100  1.00  0.00           C  
HETATM   12  C10 UNL     1      -2.057   3.284   0.902  1.00  0.00           C  
HETATM   13  C11 UNL     1      -3.243   2.858   1.459  1.00  0.00           C  
HETATM   14  C12 UNL     1      -3.791   1.691   1.016  1.00  0.00           C  
HETATM   15  C13 UNL     1      -3.152   0.976   0.032  1.00  0.00           C  
HETATM   16  N2  UNL     1      -1.537  -1.901  -1.317  1.00  0.00           N  
HETATM   17  C14 UNL     1      -0.867  -2.950  -0.834  1.00  0.00           C  
HETATM   18  C15 UNL     1      -1.172  -4.296  -0.758  1.00  0.00           C  
HETATM   19  C16 UNL     1      -0.268  -5.164  -0.191  1.00  0.00           C  
HETATM   20  C17 UNL     1       0.940  -4.651   0.293  1.00  0.00           C  
HETATM   21  C18 UNL     1       1.232  -3.310   0.211  1.00  0.00           C  
HETATM   22  C19 UNL     1       0.324  -2.459  -0.354  1.00  0.00           C  
HETATM   23  H1  UNL     1       4.840   3.010   0.050  1.00  0.00           H  
HETATM   24  H2  UNL     1       4.572   2.947   1.809  1.00  0.00           H  
HETATM   25  H3  UNL     1       3.786   4.221   0.831  1.00  0.00           H  
HETATM   26  H4  UNL     1       3.140   1.022   2.302  1.00  0.00           H  
HETATM   27  H5  UNL     1       0.418   1.012   1.295  1.00  0.00           H  
HETATM   28  H6  UNL     1       1.349  -0.338   2.014  1.00  0.00           H  
HETATM   29  H7  UNL     1       2.445  -0.846  -0.095  1.00  0.00           H  
HETATM   30  H8  UNL     1       1.725   0.517  -0.932  1.00  0.00           H  
HETATM   31  H9  UNL     1      -0.542   1.102  -2.165  1.00  0.00           H  
HETATM   32  H10 UNL     1      -2.136   0.372  -2.384  1.00  0.00           H  
HETATM   33  H11 UNL     1      -0.502   2.901  -0.517  1.00  0.00           H  
HETATM   34  H12 UNL     1      -1.575   4.219   1.226  1.00  0.00           H  
HETATM   35  H13 UNL     1      -3.706   3.467   2.238  1.00  0.00           H  
HETATM   36  H14 UNL     1      -4.730   1.317   1.430  1.00  0.00           H  
HETATM   37  H15 UNL     1      -3.598   0.053  -0.311  1.00  0.00           H  
HETATM   38  H16 UNL     1      -2.487  -1.984  -1.749  1.00  0.00           H  
HETATM   39  H17 UNL     1      -2.112  -4.700  -1.133  1.00  0.00           H  
HETATM   40  H18 UNL     1      -0.434  -6.233  -0.094  1.00  0.00           H  
HETATM   41  H19 UNL     1       1.636  -5.336   0.733  1.00  0.00           H  
HETATM   42  H20 UNL     1       2.151  -2.939   0.582  1.00  0.00           H  
CONECT    1    2   23   24   25
CONECT    2    3    3    4
CONECT    4    5   26
CONECT    5    6   27   28
CONECT    6    7   29   30
CONECT    7    8    8   22
CONECT    8    9   16
CONECT    9   10   31   32
CONECT   10   11   11   15
CONECT   11   12   33
CONECT   12   13   13   34
CONECT   13   14   35
CONECT   14   15   15   36
CONECT   15   37
CONECT   16   17   38
CONECT   17   18   18   22
CONECT   18   19   39
CONECT   19   20   20   40
CONECT   20   21   41
CONECT   21   22   22   42
END

HMDB0254229
     RDKit          3D
luzindole
 42 44  0  0  0  0  0  0  0  0999 V2000
    4.0790    3.1540    0.8651 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8717    2.3134    0.6102 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1907    2.5998   -0.3702 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5234    1.2320    1.4594 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.3504    0.4467    1.1678 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4879   -0.2298   -0.1465 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3644   -1.0720   -0.5576 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8094   -0.7519   -1.1600 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3300    0.5376   -1.6125 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9547    1.3656   -0.5607 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4188    2.5432   -0.1004 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0575    3.2837    0.9015 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2425    2.8578    1.4588 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7912    1.6913    1.0157 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1519    0.9757    0.0316 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5375   -1.9008   -1.3170 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8665   -2.9501   -0.8337 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1718   -4.2956   -0.7575 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2677   -5.1641   -0.1909 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9396   -4.6512    0.2929 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2319   -3.3099    0.2112 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3244   -2.4586   -0.3541 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8398    3.0100    0.0498 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5724    2.9475    1.8088 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7857    4.2213    0.8315 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1405    1.0223    2.3019 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4180    1.0125    1.2949 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3487   -0.3379    2.0144 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4445   -0.8465   -0.0949 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7245    0.5167   -0.9316 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5421    1.1023   -2.1647 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1365    0.3717   -2.3841 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5016    2.9006   -0.5170 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5755    4.2188    1.2257 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7063    3.4673    2.2385 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7302    1.3165    1.4300 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5982    0.0526   -0.3114 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4874   -1.9844   -1.7487 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1122   -4.7002   -1.1330 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4345   -6.2330   -0.0942 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6356   -5.3363    0.7326 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1510   -2.9387    0.5821 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  2  0
  2  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  2  0
  8  9  1  0
  9 10  1  0
 10 11  2  0
 11 12  1  0
 12 13  2  0
 13 14  1  0
 14 15  2  0
  8 16  1  0
 16 17  1  0
 17 18  2  0
 18 19  1  0
 19 20  2  0
 20 21  1  0
 21 22  2  0
 22  7  1  0
 15 10  1  0
 22 17  1  0
  1 23  1  0
  1 24  1  0
  1 25  1  0
  4 26  1  0
  5 27  1  0
  5 28  1  0
  6 29  1  0
  6 30  1  0
  9 31  1  0
  9 32  1  0
 11 33  1  0
 12 34  1  0
 13 35  1  0
 14 36  1  0
 15 37  1  0
 16 38  1  0
 18 39  1  0
 19 40  1  0
 20 41  1  0
 21 42  1  0
M  END

View in JSmol View Stereo Labels

Synonyms

Value	Source
2-Benzyl-N-acetyltryptamine	ChEBI
N 0774	ChEBI
N-0774	ChEBI
N-Acetyl-2-benzyltryptamine	ChEBI

Chemical Formula

C₁₉H₂₀N₂O

Average Molecular Weight

292.382

Monoisotopic Molecular Weight

292.157563272

IUPAC Name

N-[2-(2-benzyl-1H-indol-3-yl)ethyl]acetamide

Traditional Name

luzindole

CAS Registry Number

Not Available

SMILES

CC(=O)NCCC1=C(CC2=CC=CC=C2)NC2=CC=CC=C12

InChI Identifier

InChI=1S/C19H20N2O/c1-14(22)20-12-11-17-16-9-5-6-10-18(16)21-19(17)13-15-7-3-2-4-8-15/h2-10,21H,11-13H2,1H3,(H,20,22)

InChI Key

WVVXBPKOIZGVNS-UHFFFAOYSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as 3-alkylindoles. 3-Alkylindoles are compounds containing an indole moiety that carries an alkyl chain at the 3-position.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Indoles and derivatives

Sub Class

Indoles

Direct Parent

3-alkylindoles

Alternative Parents

Substituents

3-alkylindole
Monocyclic benzene moiety
Substituted pyrrole
Benzenoid
Pyrrole
Heteroaromatic compound
Organic 1,3-dipolar compound
Propargyl-type 1,3-dipolar organic compound
Carboximidic acid derivative
Carboximidic acid
Azacycle
Hydrocarbon derivative
Organopnictogen compound
Organic oxygen compound
Organooxygen compound
Organonitrogen compound
Organic nitrogen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Ontology

Physiological effect

Not Available

Disposition

Biological location

Non-excretory biofluid

Biofluid or Excreta

Blood (PMID: 31557052)

Source

Exogenous

Exogenous (PMID: 31557052)

Process

Not Available

Role

Not Available

Physical Properties

State

Not Available

Experimental Molecular Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
logP	3.59	ALOGPS
logP	3.16	ChemAxon
logS	-5.3	ALOGPS
pKa (Strongest Acidic)	15.68	ChemAxon
pKa (Strongest Basic)	-1.6	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	1	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	44.89 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	89.59 m³·mol⁻¹	ChemAxon
Polarizability	33.58 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
DeepCCS	[M-2H]-	195.409	30932474
DeepCCS	[M+Na]+	170.974	30932474
AllCCS	[M+H]+	171.2	32859911
AllCCS	[M+H-H2O]+	167.6	32859911
AllCCS	[M+NH4]+	174.5	32859911
AllCCS	[M+Na]+	175.4	32859911
AllCCS	[M-H]-	176.9	32859911
AllCCS	[M+Na-2H]-	176.4	32859911
AllCCS	[M+HCOO]-	176.1	32859911

Predicted Retention Times

Underivatized

Chromatographic Method	Retention Time	Reference
Predicted by Siyang on May 30, 2022	16.0742 minutes	33406817
Predicted by Siyang using ReTip algorithm on June 8, 2022	1.77 minutes	32390414
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid	2614.5 seconds	40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid	479.8 seconds	40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid	200.0 seconds	40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid	242.5 seconds	40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	418.7 seconds	40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid	659.8 seconds	40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid	655.1 seconds	40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)	69.1 seconds	40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid	1415.9 seconds	40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid	619.0 seconds	40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid	1630.9 seconds	40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	423.5 seconds	40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	409.7 seconds	40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate	285.0 seconds	40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA	198.3 seconds	40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water	8.0 seconds	40023050

Predicted Kovats Retention Indices

Underivatized

Metabolite	SMILES	Kovats RI Value	Column Type	Reference
luzindole	CC(=O)NCCC1=C(CC2=CC=CC=C2)NC2=CC=CC=C12	3915.4	Standard polar	33892256
luzindole	CC(=O)NCCC1=C(CC2=CC=CC=C2)NC2=CC=CC=C12	2867.7	Standard non polar	33892256
luzindole	CC(=O)NCCC1=C(CC2=CC=CC=C2)NC2=CC=CC=C12	2826.8	Semi standard non polar	33892256

Derivatized

Derivative Name / Structure	SMILES	Kovats RI Value	Column Type	Reference
luzindole,1TMS,isomer #1	CC(=O)N(CCC1=C(CC2=CC=CC=C2)[NH]C2=CC=CC=C12)[Si](C)(C)C	2720.9	Semi standard non polar	33892256
luzindole,1TMS,isomer #1	CC(=O)N(CCC1=C(CC2=CC=CC=C2)[NH]C2=CC=CC=C12)[Si](C)(C)C	2789.9	Standard non polar	33892256
luzindole,1TMS,isomer #1	CC(=O)N(CCC1=C(CC2=CC=CC=C2)[NH]C2=CC=CC=C12)[Si](C)(C)C	3401.5	Standard polar	33892256
luzindole,1TMS,isomer #2	CC(=O)NCCC1=C(CC2=CC=CC=C2)N([Si](C)(C)C)C2=CC=CC=C12	2782.9	Semi standard non polar	33892256
luzindole,1TMS,isomer #2	CC(=O)NCCC1=C(CC2=CC=CC=C2)N([Si](C)(C)C)C2=CC=CC=C12	2622.4	Standard non polar	33892256
luzindole,1TMS,isomer #2	CC(=O)NCCC1=C(CC2=CC=CC=C2)N([Si](C)(C)C)C2=CC=CC=C12	3349.4	Standard polar	33892256
luzindole,2TMS,isomer #1	CC(=O)N(CCC1=C(CC2=CC=CC=C2)N([Si](C)(C)C)C2=CC=CC=C12)[Si](C)(C)C	2707.3	Semi standard non polar	33892256
luzindole,2TMS,isomer #1	CC(=O)N(CCC1=C(CC2=CC=CC=C2)N([Si](C)(C)C)C2=CC=CC=C12)[Si](C)(C)C	2746.5	Standard non polar	33892256
luzindole,2TMS,isomer #1	CC(=O)N(CCC1=C(CC2=CC=CC=C2)N([Si](C)(C)C)C2=CC=CC=C12)[Si](C)(C)C	3128.2	Standard polar	33892256
luzindole,1TBDMS,isomer #1	CC(=O)N(CCC1=C(CC2=CC=CC=C2)[NH]C2=CC=CC=C12)[Si](C)(C)C(C)(C)C	2934.2	Semi standard non polar	33892256
luzindole,1TBDMS,isomer #1	CC(=O)N(CCC1=C(CC2=CC=CC=C2)[NH]C2=CC=CC=C12)[Si](C)(C)C(C)(C)C	2989.6	Standard non polar	33892256
luzindole,1TBDMS,isomer #1	CC(=O)N(CCC1=C(CC2=CC=CC=C2)[NH]C2=CC=CC=C12)[Si](C)(C)C(C)(C)C	3459.8	Standard polar	33892256
luzindole,1TBDMS,isomer #2	CC(=O)NCCC1=C(CC2=CC=CC=C2)N([Si](C)(C)C(C)(C)C)C2=CC=CC=C12	2979.5	Semi standard non polar	33892256
luzindole,1TBDMS,isomer #2	CC(=O)NCCC1=C(CC2=CC=CC=C2)N([Si](C)(C)C(C)(C)C)C2=CC=CC=C12	2842.3	Standard non polar	33892256
luzindole,1TBDMS,isomer #2	CC(=O)NCCC1=C(CC2=CC=CC=C2)N([Si](C)(C)C(C)(C)C)C2=CC=CC=C12	3387.4	Standard polar	33892256
luzindole,2TBDMS,isomer #1	CC(=O)N(CCC1=C(CC2=CC=CC=C2)N([Si](C)(C)C(C)(C)C)C2=CC=CC=C12)[Si](C)(C)C(C)(C)C	3096.2	Semi standard non polar	33892256
luzindole,2TBDMS,isomer #1	CC(=O)N(CCC1=C(CC2=CC=CC=C2)N([Si](C)(C)C(C)(C)C)C2=CC=CC=C12)[Si](C)(C)C(C)(C)C	3114.5	Standard non polar	33892256
luzindole,2TBDMS,isomer #1	CC(=O)N(CCC1=C(CC2=CC=CC=C2)N([Si](C)(C)C(C)(C)C)C2=CC=CC=C12)[Si](C)(C)C(C)(C)C	3271.2	Standard polar	33892256

Spectra

GC-MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted GC-MS	Predicted GC-MS Spectrum - Luzindole GC-MS (Non-derivatized) - 70eV, Positive	splash10-006x-9080000000-259d26483cc4beb59b4c	2021-09-23	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - Luzindole GC-MS (Non-derivatized) - 70eV, Positive	Not Available	2021-10-12	Wishart Lab	View Spectrum

MS/MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Luzindole 10V, Positive-QTOF	splash10-0006-0090000000-5b13622bd707095aa731	2021-10-12	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Luzindole 20V, Positive-QTOF	splash10-001i-1190000000-64ca2174c82fb2006c90	2021-10-12	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Luzindole 40V, Positive-QTOF	splash10-0006-9570000000-d749e00b3624a69a55a8	2021-10-12	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Luzindole 10V, Negative-QTOF	splash10-0006-0090000000-c0d990d8a6cb1a338df3	2021-10-12	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Luzindole 20V, Negative-QTOF	splash10-0ab9-7090000000-1c6d83d32079d5322b8c	2021-10-12	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Luzindole 40V, Negative-QTOF	splash10-05bf-5490000000-d8fc4d431cbd17f2b9be	2021-10-12	Wishart Lab	View Spectrum

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Blood

Tissue Locations

Not Available

Pathways

Not Available

Name	SMPDB/PathBank	KEGG

Normal Concentrations

Biospecimen	Status	Value	Age	Sex	Condition	Reference	Details
Blood	Detected but not Quantified	Not Quantified	Not Specified	Not Specified	Normal	31557052	details

Abnormal Concentrations

Not Available

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

108959

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Luzindole

METLIN ID

Not Available

PubChem Compound

122162

PDB ID

Not Available

ChEBI ID

131788

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

Not Available

References

Synthesis Reference

Not Available

Material Safety Data Sheet (MSDS)

Not Available

General References

Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]

Showing metabocard for Luzindole (HMDB0254229)

MOL for HMDB0254229 (Luzindole)

3D MOL for HMDB0254229 (Luzindole)

3D SDF for HMDB0254229 (Luzindole)

3D-SDF for HMDB0254229 (Luzindole)

PDB for HMDB0254229 (Luzindole)

3D PDB for HMDB0254229 (Luzindole)

SMILES for HMDB0254229 (Luzindole)

INCHI for HMDB0254229 (Luzindole)

Structure for HMDB0254229 (Luzindole)

3D Structure for HMDB0254229 (Luzindole)

Predicted Collision Cross Sections

Predicted Retention Times

Underivatized

Predicted Kovats Retention Indices

Underivatized

Derivatized

GC-MS Spectra

MS/MS Spectra