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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 16:16:52 UTC
Update Date2021-09-26 23:11:24 UTC
HMDB IDHMDB0256027
Secondary Accession NumbersNone
Metabolite Identification
Common NameOzanimod
Description5-(3-{1-[(2-hydroxyethyl)amino]-2,3-dihydro-1H-inden-4-yl}-1,2,4-oxadiazol-5-yl)-2-(propan-2-yloxy)benzonitrile belongs to the class of organic compounds known as phenyloxadiazoles. These are polycyclic aromatic compounds containing a benzene ring linked to a 1,2,4-oxadiazole ring through a CC or CN bond. Based on a literature review very few articles have been published on 5-(3-{1-[(2-hydroxyethyl)amino]-2,3-dihydro-1H-inden-4-yl}-1,2,4-oxadiazol-5-yl)-2-(propan-2-yloxy)benzonitrile. This compound has been identified in human blood as reported by (PMID: 31557052 ). Ozanimod is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Ozanimod is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC23H24N4O3
Average Molecular Weight404.47
Monoisotopic Molecular Weight404.184840649
IUPAC Name5-(3-{1-[(2-hydroxyethyl)amino]-2,3-dihydro-1H-inden-4-yl}-1,2,4-oxadiazol-5-yl)-2-(propan-2-yloxy)benzonitrile
Traditional Name5-(3-{1-[(2-hydroxyethyl)amino]-2,3-dihydro-1H-inden-4-yl}-1,2,4-oxadiazol-5-yl)-2-isopropoxybenzonitrile
CAS Registry NumberNot Available
SMILES
CC(C)OC1=C(C=C(C=C1)C1=NC(=NO1)C1=C2CCC(NCCO)C2=CC=C1)C#N
InChI Identifier
InChI=1S/C23H24N4O3/c1-14(2)29-21-9-6-15(12-16(21)13-24)23-26-22(27-30-23)19-5-3-4-18-17(19)7-8-20(18)25-10-11-28/h3-6,9,12,14,20,25,28H,7-8,10-11H2,1-2H3
InChI KeyXRVDGNKRPOAQTN-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as phenyloxadiazoles. These are polycyclic aromatic compounds containing a benzene ring linked to a 1,2,4-oxadiazole ring through a CC or CN bond.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassAzoles
Sub ClassOxadiazoles
Direct ParentPhenyloxadiazoles
Alternative Parents
Substituents
  • Phenyl-1,2,4-oxadiazole
  • Indane
  • Phenoxy compound
  • Benzonitrile
  • Phenol ether
  • Alkyl aryl ether
  • Aralkylamine
  • Monocyclic benzene moiety
  • Benzenoid
  • Heteroaromatic compound
  • 1,2-aminoalcohol
  • Alkanolamine
  • Secondary aliphatic amine
  • Ether
  • Oxacycle
  • Carbonitrile
  • Nitrile
  • Azacycle
  • Secondary amine
  • Organic nitrogen compound
  • Alcohol
  • Organic oxygen compound
  • Amine
  • Organonitrogen compound
  • Organooxygen compound
  • Cyanide
  • Primary alcohol
  • Hydrocarbon derivative
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Not AvailableNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP2.81ALOGPS
logP3.96ChemAxon
logS-3.4ALOGPS
pKa (Strongest Acidic)15.6ChemAxon
pKa (Strongest Basic)8.96ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area104.2 ŲChemAxon
Rotatable Bond Count7ChemAxon
Refractivity135.66 m³·mol⁻¹ChemAxon
Polarizability45.51 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+195.03630932474
DeepCCS[M-H]-192.67830932474
DeepCCS[M-2H]-226.43930932474
DeepCCS[M+Na]+201.66730932474

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
OzanimodCC(C)OC1=C(C=C(C=C1)C1=NC(=NO1)C1=C2CCC(NCCO)C2=CC=C1)C#N4458.3Standard polar33892256
OzanimodCC(C)OC1=C(C=C(C=C1)C1=NC(=NO1)C1=C2CCC(NCCO)C2=CC=C1)C#N3541.9Standard non polar33892256
OzanimodCC(C)OC1=C(C=C(C=C1)C1=NC(=NO1)C1=C2CCC(NCCO)C2=CC=C1)C#N3763.3Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Ozanimod,2TMS,isomer #1CC(C)OC1=CC=C(C2=NC(C3=CC=CC4=C3CCC4N(CCO[Si](C)(C)C)[Si](C)(C)C)=NO2)C=C1C#N3686.3Semi standard non polar33892256
Ozanimod,2TMS,isomer #1CC(C)OC1=CC=C(C2=NC(C3=CC=CC4=C3CCC4N(CCO[Si](C)(C)C)[Si](C)(C)C)=NO2)C=C1C#N3640.7Standard non polar33892256
Ozanimod,2TMS,isomer #1CC(C)OC1=CC=C(C2=NC(C3=CC=CC4=C3CCC4N(CCO[Si](C)(C)C)[Si](C)(C)C)=NO2)C=C1C#N4593.5Standard polar33892256
Ozanimod,2TBDMS,isomer #1CC(C)OC1=CC=C(C2=NC(C3=CC=CC4=C3CCC4N(CCO[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=NO2)C=C1C#N4066.0Semi standard non polar33892256
Ozanimod,2TBDMS,isomer #1CC(C)OC1=CC=C(C2=NC(C3=CC=CC4=C3CCC4N(CCO[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=NO2)C=C1C#N4027.2Standard non polar33892256
Ozanimod,2TBDMS,isomer #1CC(C)OC1=CC=C(C2=NC(C3=CC=CC4=C3CCC4N(CCO[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=NO2)C=C1C#N4657.3Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Ozanimod GC-MS (Non-derivatized) - 70eV, Positivesplash10-0w30-1429000000-c4644609a0d71050a8d92021-09-24Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ozanimod GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ozanimod GC-MS (TMS_1_1) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ozanimod GC-MS (TMS_1_2) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ozanimod GC-MS (TBDMS_1_1) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ozanimod GC-MS (TBDMS_1_2) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID64880264
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound25110515
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]