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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 18:10:15 UTC
Update Date2021-09-26 23:13:31 UTC
HMDB IDHMDB0257267
Secondary Accession NumbersNone
Metabolite Identification
Common Name3,4-Dimethoxy-N-(4-(3-nitrophenyl)thiazol-2-yl)benzenesulfonamide
Description3,4-Dimethoxy-N-(4-(3-nitrophenyl)thiazol-2-yl)benzenesulfonamide, also known as ro-61-8048 sulfonamide, belongs to the class of organic compounds known as benzenesulfonamides. These are organic compounds containing a sulfonamide group that is S-linked to a benzene ring. Based on a literature review a significant number of articles have been published on 3,4-Dimethoxy-N-(4-(3-nitrophenyl)thiazol-2-yl)benzenesulfonamide. This compound has been identified in human blood as reported by (PMID: 31557052 ). 3,4-dimethoxy-n-(4-(3-nitrophenyl)thiazol-2-yl)benzenesulfonamide is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically 3,4-Dimethoxy-N-(4-(3-nitrophenyl)thiazol-2-yl)benzenesulfonamide is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
3,4-Dimethoxy-N-(4-(3-nitrophenyl)thiazol-2-yl)benzenesulphonamideGenerator
3,4-Dimethoxy-N-[4-(3-nitrophenyl)-1,3-thiazol-2-yl]benzene-1-sulphonamideHMDB
Ro-61-8048 sulfonamideHMDB
Chemical FormulaC17H15N3O6S2
Average Molecular Weight421.44
Monoisotopic Molecular Weight421.040227563
IUPAC Name3,4-dimethoxy-N-[4-(3-nitrophenyl)-1,3-thiazol-2-yl]benzene-1-sulfonamide
Traditional Name3,4-dimethoxy-N-[4-(3-nitrophenyl)-1,3-thiazol-2-yl]benzenesulfonamide
CAS Registry NumberNot Available
SMILES
COC1=C(OC)C=C(C=C1)S(=O)(=O)NC1=NC(=CS1)C1=CC(=CC=C1)[N+]([O-])=O
InChI Identifier
InChI=1S/C17H15N3O6S2/c1-25-15-7-6-13(9-16(15)26-2)28(23,24)19-17-18-14(10-27-17)11-4-3-5-12(8-11)20(21)22/h3-10H,1-2H3,(H,18,19)
InChI KeyNDPBMCKQJOZAQX-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as benzenesulfonamides. These are organic compounds containing a sulfonamide group that is S-linked to a benzene ring.
KingdomOrganic compounds
Super ClassBenzenoids
ClassBenzene and substituted derivatives
Sub ClassBenzenesulfonamides
Direct ParentBenzenesulfonamides
Alternative Parents
Substituents
  • Dimethoxybenzene
  • O-dimethoxybenzene
  • Benzenesulfonamide
  • Nitrobenzene
  • Benzenesulfonyl group
  • Phenoxy compound
  • Methoxybenzene
  • Phenol ether
  • Nitroaromatic compound
  • Anisole
  • 2,4-disubstituted 1,3-thiazole
  • Alkyl aryl ether
  • Organosulfonic acid amide
  • Sulfonyl
  • Thiazole
  • Aminosulfonyl compound
  • Organic sulfonic acid or derivatives
  • Heteroaromatic compound
  • Organosulfonic acid or derivatives
  • Azole
  • C-nitro compound
  • Organic nitro compound
  • Propargyl-type 1,3-dipolar organic compound
  • Organic 1,3-dipolar compound
  • Organoheterocyclic compound
  • Allyl-type 1,3-dipolar organic compound
  • Ether
  • Azacycle
  • Organic oxoazanium
  • Organic zwitterion
  • Organonitrogen compound
  • Organooxygen compound
  • Organic nitrogen compound
  • Organosulfur compound
  • Hydrocarbon derivative
  • Organic oxide
  • Organopnictogen compound
  • Organic oxygen compound
  • Aromatic heteromonocyclic compound
Molecular FrameworkAromatic heteromonocyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP3.48ALOGPS
logP3.46ChemAxon
logS-4.6ALOGPS
pKa (Strongest Acidic)6.76ChemAxon
pKa (Strongest Basic)-0.46ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count7ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area120.66 ŲChemAxon
Rotatable Bond Count6ChemAxon
Refractivity101.58 m³·mol⁻¹ChemAxon
Polarizability39.9 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+187.47730932474
DeepCCS[M-H]-185.11930932474
DeepCCS[M-2H]-218.00430932474
DeepCCS[M+Na]+193.5730932474
AllCCS[M+H]+193.632859911
AllCCS[M+H-H2O]+191.132859911
AllCCS[M+NH4]+196.032859911
AllCCS[M+Na]+196.732859911
AllCCS[M-H]-186.332859911
AllCCS[M+Na-2H]-185.932859911
AllCCS[M+HCOO]-185.532859911

Predicted Retention Times

Underivatized

Chromatographic MethodRetention TimeReference
Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. 6.03 minutes32390414
Predicted by Siyang on May 30, 202213.2819 minutes33406817
Predicted by Siyang using ReTip algorithm on June 8, 20221.69 minutes32390414
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid2086.0 seconds40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid280.8 seconds40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid175.6 seconds40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid188.7 seconds40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid127.3 seconds40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid472.7 seconds40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid684.4 seconds40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)121.2 seconds40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid1179.5 seconds40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid444.9 seconds40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid1232.9 seconds40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid392.1 seconds40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid469.9 seconds40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate335.6 seconds40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA330.4 seconds40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water94.9 seconds40023050

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
3,4-Dimethoxy-N-(4-(3-nitrophenyl)thiazol-2-yl)benzenesulfonamideCOC1=C(OC)C=C(C=C1)S(=O)(=O)NC1=NC(=CS1)C1=CC(=CC=C1)[N+]([O-])=O5708.3Standard polar33892256
3,4-Dimethoxy-N-(4-(3-nitrophenyl)thiazol-2-yl)benzenesulfonamideCOC1=C(OC)C=C(C=C1)S(=O)(=O)NC1=NC(=CS1)C1=CC(=CC=C1)[N+]([O-])=O3647.7Standard non polar33892256
3,4-Dimethoxy-N-(4-(3-nitrophenyl)thiazol-2-yl)benzenesulfonamideCOC1=C(OC)C=C(C=C1)S(=O)(=O)NC1=NC(=CS1)C1=CC(=CC=C1)[N+]([O-])=O4003.6Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
3,4-Dimethoxy-N-(4-(3-nitrophenyl)thiazol-2-yl)benzenesulfonamide,1TMS,isomer #1COC1=CC=C(S(=O)(=O)N(C2=NC(C3=CC=CC([N+](=O)[O-])=C3)=CS2)[Si](C)(C)C)C=C1OC3570.0Semi standard non polar33892256
3,4-Dimethoxy-N-(4-(3-nitrophenyl)thiazol-2-yl)benzenesulfonamide,1TMS,isomer #1COC1=CC=C(S(=O)(=O)N(C2=NC(C3=CC=CC([N+](=O)[O-])=C3)=CS2)[Si](C)(C)C)C=C1OC3592.4Standard non polar33892256
3,4-Dimethoxy-N-(4-(3-nitrophenyl)thiazol-2-yl)benzenesulfonamide,1TMS,isomer #1COC1=CC=C(S(=O)(=O)N(C2=NC(C3=CC=CC([N+](=O)[O-])=C3)=CS2)[Si](C)(C)C)C=C1OC5108.5Standard polar33892256
3,4-Dimethoxy-N-(4-(3-nitrophenyl)thiazol-2-yl)benzenesulfonamide,1TBDMS,isomer #1COC1=CC=C(S(=O)(=O)N(C2=NC(C3=CC=CC([N+](=O)[O-])=C3)=CS2)[Si](C)(C)C(C)(C)C)C=C1OC3857.0Semi standard non polar33892256
3,4-Dimethoxy-N-(4-(3-nitrophenyl)thiazol-2-yl)benzenesulfonamide,1TBDMS,isomer #1COC1=CC=C(S(=O)(=O)N(C2=NC(C3=CC=CC([N+](=O)[O-])=C3)=CS2)[Si](C)(C)C(C)(C)C)C=C1OC3815.4Standard non polar33892256
3,4-Dimethoxy-N-(4-(3-nitrophenyl)thiazol-2-yl)benzenesulfonamide,1TBDMS,isomer #1COC1=CC=C(S(=O)(=O)N(C2=NC(C3=CC=CC([N+](=O)[O-])=C3)=CS2)[Si](C)(C)C(C)(C)C)C=C1OC5024.1Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 3,4-Dimethoxy-N-(4-(3-nitrophenyl)thiazol-2-yl)benzenesulfonamide GC-MS (Non-derivatized) - 70eV, Positivesplash10-002k-0911000000-0f8d824d5020a953e4382021-09-23Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 3,4-Dimethoxy-N-(4-(3-nitrophenyl)thiazol-2-yl)benzenesulfonamide GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID4445504
KEGG Compound IDC14126
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound5282337
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]